Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1363 and Dshi_1364 are separated by 13 nucleotides Dshi_1364 and Dshi_1365 are separated by 77 nucleotides Dshi_1365 and Dshi_1366 are separated by 219 nucleotides
Dshi_1363: Dshi_1363 - Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) , at 1,416,350 to 1,417,648
_1363
Dshi_1364: Dshi_1364 - hypothetical protein (RefSeq), at 1,417,662 to 1,418,054
_1364
Dshi_1365: Dshi_1365 - transcriptional regulator, TetR family (RefSeq), at 1,418,132 to 1,418,767
_1365
Dshi_1366: Dshi_1366 - aminotransferase class-III (RefSeq), at 1,418,987 to 1,420,312
_1366
Position (kb)
1417
1418
1419 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1416.681 kb on - strand, within Dshi_1363 at 1416.840 kb on + strand, within Dshi_1363 at 1416.986 kb on - strand, within Dshi_1363 at 1417.026 kb on + strand, within Dshi_1363 at 1417.195 kb on + strand, within Dshi_1363 at 1417.195 kb on + strand, within Dshi_1363 at 1417.203 kb on - strand, within Dshi_1363 at 1417.203 kb on - strand, within Dshi_1363 at 1417.205 kb on + strand, within Dshi_1363 at 1417.277 kb on + strand, within Dshi_1363 at 1417.407 kb on - strand, within Dshi_1363 at 1417.407 kb on - strand, within Dshi_1363 at 1417.517 kb on + strand, within Dshi_1363 at 1417.673 kb on + strand at 1417.832 kb on - strand, within Dshi_1364 at 1417.932 kb on - strand, within Dshi_1364 at 1418.130 kb on + strand at 1418.130 kb on + strand at 1418.198 kb on + strand, within Dshi_1365 at 1418.244 kb on + strand, within Dshi_1365 at 1418.252 kb on - strand, within Dshi_1365 at 1418.291 kb on + strand, within Dshi_1365 at 1418.311 kb on - strand, within Dshi_1365 at 1418.312 kb on - strand, within Dshi_1365 at 1418.537 kb on + strand, within Dshi_1365 at 1418.561 kb on - strand, within Dshi_1365 at 1418.620 kb on - strand, within Dshi_1365 at 1418.668 kb on + strand, within Dshi_1365 at 1418.727 kb on - strand at 1418.742 kb on - strand at 1418.750 kb on + strand at 1418.770 kb on - strand at 1418.823 kb on + strand at 1418.829 kb on - strand at 1418.836 kb on + strand at 1418.858 kb on - strand at 1418.887 kb on + strand at 1418.895 kb on - strand at 1418.912 kb on - strand at 1418.919 kb on + strand at 1418.919 kb on + strand at 1418.919 kb on + strand at 1418.990 kb on + strand at 1419.007 kb on - strand at 1419.007 kb on - strand at 1419.012 kb on + strand at 1419.024 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 1,416,681 - Dshi_1363 0.25 -0.0 1,416,840 + Dshi_1363 0.38 +0.3 1,416,986 - Dshi_1363 0.49 -0.7 1,417,026 + Dshi_1363 0.52 -0.1 1,417,195 + Dshi_1363 0.65 -0.4 1,417,195 + Dshi_1363 0.65 -0.0 1,417,203 - Dshi_1363 0.66 -0.3 1,417,203 - Dshi_1363 0.66 -0.4 1,417,205 + Dshi_1363 0.66 -3.0 1,417,277 + Dshi_1363 0.71 -0.5 1,417,407 - Dshi_1363 0.81 +0.1 1,417,407 - Dshi_1363 0.81 -0.5 1,417,517 + Dshi_1363 0.90 +1.3 1,417,673 + -0.0 1,417,832 - Dshi_1364 0.43 -0.5 1,417,932 - Dshi_1364 0.69 -1.0 1,418,130 + +1.0 1,418,130 + +0.1 1,418,198 + Dshi_1365 0.10 -0.5 1,418,244 + Dshi_1365 0.18 -0.0 1,418,252 - Dshi_1365 0.19 -0.6 1,418,291 + Dshi_1365 0.25 +0.4 1,418,311 - Dshi_1365 0.28 +0.1 1,418,312 - Dshi_1365 0.28 -0.2 1,418,537 + Dshi_1365 0.64 +1.2 1,418,561 - Dshi_1365 0.67 -0.4 1,418,620 - Dshi_1365 0.77 -1.0 1,418,668 + Dshi_1365 0.84 -0.3 1,418,727 - -0.1 1,418,742 - +0.7 1,418,750 + +1.3 1,418,770 - -1.2 1,418,823 + -0.0 1,418,829 - -0.2 1,418,836 + -0.3 1,418,858 - -0.4 1,418,887 + +0.4 1,418,895 - +0.2 1,418,912 - +0.6 1,418,919 + -0.3 1,418,919 + -0.4 1,418,919 + +0.3 1,418,990 + +0.7 1,419,007 - -1.0 1,419,007 - +0.1 1,419,012 + -0.5 1,419,024 + -0.6
Or see this region's nucleotide sequence