Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1179

Experiment: m.b. Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 0.005 mg/ml
1,209,930	+		Dshi_1177	0.56	-0.4
1,209,930	+		Dshi_1177	0.56	+1.2
1,210,244	-				+0.3
1,210,343	+				-0.1
1,210,352	+				+0.0
1,210,420	-		Dshi_1178	0.18	-0.6
1,210,501	-		Dshi_1178	0.36	+0.5
1,210,659	+		Dshi_1178	0.70	-0.5
1,210,667	-		Dshi_1178	0.72	+0.1
1,210,697	-		Dshi_1178	0.78	+0.3
1,210,769	-				+0.7
1,210,834	-				+1.0
1,210,890	+				-0.1
1,210,929	+				-0.6
1,210,977	-				-0.1
1,211,075	+				-0.6
1,211,374	-		Dshi_1179	0.15	+1.0
1,211,398	+		Dshi_1179	0.15	-2.3
1,211,408	+		Dshi_1179	0.16	-1.1
1,211,611	+		Dshi_1179	0.22	+0.1
1,211,659	-		Dshi_1179	0.23	-0.1
1,211,665	-		Dshi_1179	0.23	+0.2
1,211,873	-		Dshi_1179	0.30	-0.2
1,212,073	+		Dshi_1179	0.36	-0.9
1,212,102	-		Dshi_1179	0.37	-0.4
1,212,133	+		Dshi_1179	0.37	-1.0
1,212,162	-		Dshi_1179	0.38	-0.1
1,212,174	+		Dshi_1179	0.39	-1.0
1,212,174	+		Dshi_1179	0.39	-0.8
1,212,182	-		Dshi_1179	0.39	-0.8
1,212,681	-		Dshi_1179	0.54	-0.3
1,212,740	+		Dshi_1179	0.56	-0.7
1,212,956	+		Dshi_1179	0.62	-0.7
1,212,995	+		Dshi_1179	0.63	-0.4
1,213,214	-		Dshi_1179	0.70	-0.8
1,213,300	-		Dshi_1179	0.73	-0.6
1,213,717	-		Dshi_1179	0.85	-1.9
1,213,898	+				-0.8
1,213,983	+				-0.8
1,214,014	-				-0.1
1,214,074	-				+1.0
1,214,094	+				-1.3
1,214,154	-				-0.4
1,214,187	+				-0.0
1,214,418	-		Dshi_1180	0.17	+0.3
1,214,433	-		Dshi_1180	0.19	-0.7
1,214,552	+		Dshi_1180	0.30	-0.3
1,214,669	+		Dshi_1180	0.41	-0.6
1,214,683	-		Dshi_1180	0.42	+1.0
1,214,727	+		Dshi_1180	0.46	+0.7
1,214,850	-		Dshi_1180	0.58	-1.2
1,214,871	-		Dshi_1180	0.60	+0.2