Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0906 and Dshi_0907 overlap by 4 nucleotides Dshi_0907 and Dshi_0908 overlap by 4 nucleotides Dshi_0908 and Dshi_0909 overlap by 4 nucleotides Dshi_0909 and Dshi_0910 overlap by 4 nucleotides
Dshi_0906: Dshi_0906 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 930,196 to 930,930
_0906
Dshi_0907: Dshi_0907 - ABC transporter related (RefSeq), at 930,927 to 931,655
_0907
Dshi_0908: Dshi_0908 - transcriptional activator, TenA family (RefSeq), at 931,652 to 932,350
_0908
Dshi_0909: Dshi_0909 - NMT1/THI5 like domain protein (RefSeq), at 932,347 to 933,282
_0909
Dshi_0910: Dshi_0910 - UBA/THIF-type NAD/FAD binding protein (RefSeq), at 933,279 to 934,244
_0910
Position (kb) 931
932
933 Strain fitness (log2 ratio) -2
-1
0
1 at 930.692 kb on - strand, within Dshi_0906 at 930.866 kb on - strand at 931.091 kb on + strand, within Dshi_0907 at 931.233 kb on - strand, within Dshi_0907 at 931.442 kb on + strand, within Dshi_0907 at 931.554 kb on + strand, within Dshi_0907 at 931.631 kb on - strand at 931.887 kb on + strand, within Dshi_0908 at 931.924 kb on - strand, within Dshi_0908 at 931.999 kb on - strand, within Dshi_0908 at 932.107 kb on - strand, within Dshi_0908 at 932.145 kb on + strand, within Dshi_0908 at 932.145 kb on + strand, within Dshi_0908 at 932.153 kb on - strand, within Dshi_0908 at 932.172 kb on + strand, within Dshi_0908 at 932.446 kb on - strand, within Dshi_0909 at 932.644 kb on - strand, within Dshi_0909 at 932.651 kb on + strand, within Dshi_0909 at 932.659 kb on - strand, within Dshi_0909 at 932.688 kb on - strand, within Dshi_0909 at 932.821 kb on - strand, within Dshi_0909 at 932.888 kb on - strand, within Dshi_0909 at 933.202 kb on + strand at 933.210 kb on - strand at 933.215 kb on + strand at 933.250 kb on + strand at 933.258 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 930,692 - Dshi_0906 0.67 +0.1 930,866 - -0.6 931,091 + Dshi_0907 0.22 +0.2 931,233 - Dshi_0907 0.42 -0.7 931,442 + Dshi_0907 0.71 -0.5 931,554 + Dshi_0907 0.86 +0.2 931,631 - -0.5 931,887 + Dshi_0908 0.34 -1.0 931,924 - Dshi_0908 0.39 -2.0 931,999 - Dshi_0908 0.50 -0.6 932,107 - Dshi_0908 0.65 -0.4 932,145 + Dshi_0908 0.71 -2.2 932,145 + Dshi_0908 0.71 -0.2 932,153 - Dshi_0908 0.72 -0.4 932,172 + Dshi_0908 0.74 -0.5 932,446 - Dshi_0909 0.11 +0.1 932,644 - Dshi_0909 0.32 -0.7 932,651 + Dshi_0909 0.32 -0.9 932,659 - Dshi_0909 0.33 +0.4 932,688 - Dshi_0909 0.36 -0.3 932,821 - Dshi_0909 0.51 -0.2 932,888 - Dshi_0909 0.58 -1.2 933,202 + +0.0 933,210 - +1.0 933,215 + -0.9 933,250 + -0.5 933,258 - +0.9
Or see this region's nucleotide sequence