Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0847 and Dshi_0848 overlap by 4 nucleotides Dshi_0848 and Dshi_0849 are separated by 125 nucleotides
Dshi_0847: Dshi_0847 - Dihydroorotate oxidase (RefSeq), at 856,488 to 857,546
_0847
Dshi_0848: Dshi_0848 - protein of unknown function DUF952 (RefSeq), at 857,543 to 857,878
_0848
Dshi_0849: Dshi_0849 - 5'-Nucleotidase domain protein (RefSeq), at 858,004 to 859,593
_0849
Position (kb) 857
858 Strain fitness (log2 ratio) -2
-1
0
1 at 856.560 kb on + strand at 856.608 kb on - strand, within Dshi_0847 at 856.618 kb on - strand, within Dshi_0847 at 856.622 kb on + strand, within Dshi_0847 at 856.623 kb on - strand, within Dshi_0847 at 856.672 kb on - strand, within Dshi_0847 at 856.968 kb on - strand, within Dshi_0847 at 856.968 kb on - strand, within Dshi_0847 at 856.969 kb on + strand, within Dshi_0847 at 857.103 kb on - strand, within Dshi_0847 at 857.277 kb on + strand, within Dshi_0847 at 857.341 kb on - strand, within Dshi_0847 at 857.388 kb on - strand, within Dshi_0847 at 857.443 kb on - strand at 857.463 kb on - strand at 857.611 kb on - strand, within Dshi_0848 at 857.673 kb on - strand, within Dshi_0848 at 857.934 kb on + strand at 858.046 kb on - strand at 858.051 kb on - strand at 858.194 kb on - strand, within Dshi_0849 at 858.307 kb on - strand, within Dshi_0849 at 858.627 kb on + strand, within Dshi_0849 at 858.748 kb on + strand, within Dshi_0849 at 858.781 kb on - strand, within Dshi_0849 at 858.819 kb on + strand, within Dshi_0849 at 858.819 kb on + strand, within Dshi_0849
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 856,560 + -1.5 856,608 - Dshi_0847 0.11 -1.6 856,618 - Dshi_0847 0.12 -0.7 856,622 + Dshi_0847 0.13 -2.3 856,623 - Dshi_0847 0.13 -0.0 856,672 - Dshi_0847 0.17 -0.7 856,968 - Dshi_0847 0.45 -2.5 856,968 - Dshi_0847 0.45 -1.5 856,969 + Dshi_0847 0.45 +0.2 857,103 - Dshi_0847 0.58 -1.8 857,277 + Dshi_0847 0.75 -1.6 857,341 - Dshi_0847 0.81 -1.8 857,388 - Dshi_0847 0.85 -1.3 857,443 - -1.0 857,463 - -1.4 857,611 - Dshi_0848 0.20 -1.5 857,673 - Dshi_0848 0.39 -0.7 857,934 + -0.5 858,046 - -0.6 858,051 - -0.9 858,194 - Dshi_0849 0.12 -0.6 858,307 - Dshi_0849 0.19 +0.5 858,627 + Dshi_0849 0.39 -0.9 858,748 + Dshi_0849 0.47 -0.3 858,781 - Dshi_0849 0.49 -0.3 858,819 + Dshi_0849 0.51 +0.9 858,819 + Dshi_0849 0.51 -0.5
Or see this region's nucleotide sequence