Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0757 and Dshi_0758 are separated by 164 nucleotides Dshi_0758 and Dshi_0759 are separated by 82 nucleotides Dshi_0759 and Dshi_0760 are separated by 501 nucleotides
Dshi_0757: Dshi_0757 - selenium-binding protein (RefSeq), at 767,248 to 768,648
_0757
Dshi_0758: Dshi_0758 - transcriptional regulator, MarR family (RefSeq), at 768,813 to 769,301
_0758
Dshi_0759: Dshi_0759 - hypothetical protein (RefSeq), at 769,384 to 769,752
_0759
Dshi_0760: Dshi_0760 - hypothetical protein (RefSeq), at 770,254 to 770,736
_0760
Position (kb) 768
769
770 Strain fitness (log2 ratio) -2
-1
0
1
2 at 767.820 kb on + strand, within Dshi_0757 at 767.868 kb on + strand, within Dshi_0757 at 767.868 kb on + strand, within Dshi_0757 at 767.869 kb on + strand, within Dshi_0757 at 767.869 kb on + strand, within Dshi_0757 at 768.000 kb on - strand, within Dshi_0757 at 768.034 kb on - strand, within Dshi_0757 at 768.044 kb on - strand, within Dshi_0757 at 768.054 kb on - strand, within Dshi_0757 at 768.196 kb on + strand, within Dshi_0757 at 768.219 kb on + strand, within Dshi_0757 at 768.383 kb on + strand, within Dshi_0757 at 768.456 kb on - strand, within Dshi_0757 at 768.458 kb on + strand, within Dshi_0757 at 768.497 kb on - strand, within Dshi_0757 at 768.510 kb on + strand at 768.549 kb on + strand at 768.605 kb on + strand at 768.646 kb on + strand at 768.714 kb on - strand at 768.836 kb on - strand at 768.858 kb on - strand at 768.877 kb on - strand, within Dshi_0758 at 768.951 kb on + strand, within Dshi_0758 at 769.007 kb on - strand, within Dshi_0758 at 769.118 kb on - strand, within Dshi_0758 at 769.118 kb on - strand, within Dshi_0758 at 769.158 kb on + strand, within Dshi_0758 at 769.166 kb on - strand, within Dshi_0758 at 769.172 kb on + strand, within Dshi_0758 at 769.312 kb on + strand at 769.339 kb on + strand at 769.349 kb on + strand at 769.368 kb on - strand at 769.541 kb on + strand, within Dshi_0759 at 769.551 kb on - strand, within Dshi_0759 at 769.551 kb on - strand, within Dshi_0759 at 769.556 kb on + strand, within Dshi_0759 at 769.568 kb on + strand, within Dshi_0759 at 769.618 kb on - strand, within Dshi_0759 at 769.699 kb on + strand, within Dshi_0759
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 767,820 + Dshi_0757 0.41 -0.2 767,868 + Dshi_0757 0.44 +0.1 767,868 + Dshi_0757 0.44 -0.3 767,869 + Dshi_0757 0.44 +0.0 767,869 + Dshi_0757 0.44 +0.1 768,000 - Dshi_0757 0.54 -0.6 768,034 - Dshi_0757 0.56 +0.3 768,044 - Dshi_0757 0.57 -0.1 768,054 - Dshi_0757 0.58 -0.4 768,196 + Dshi_0757 0.68 +0.5 768,219 + Dshi_0757 0.69 -0.1 768,383 + Dshi_0757 0.81 -0.2 768,456 - Dshi_0757 0.86 -1.7 768,458 + Dshi_0757 0.86 -0.2 768,497 - Dshi_0757 0.89 +0.2 768,510 + +0.5 768,549 + +0.3 768,605 + -0.7 768,646 + +1.9 768,714 - -0.1 768,836 - -0.1 768,858 - +0.1 768,877 - Dshi_0758 0.13 -0.5 768,951 + Dshi_0758 0.28 -0.3 769,007 - Dshi_0758 0.40 -1.8 769,118 - Dshi_0758 0.62 -0.5 769,118 - Dshi_0758 0.62 -0.8 769,158 + Dshi_0758 0.71 +0.2 769,166 - Dshi_0758 0.72 -0.4 769,172 + Dshi_0758 0.73 -0.6 769,312 + -0.1 769,339 + +0.9 769,349 + -1.9 769,368 - -0.1 769,541 + Dshi_0759 0.43 -1.4 769,551 - Dshi_0759 0.45 -0.7 769,551 - Dshi_0759 0.45 -0.2 769,556 + Dshi_0759 0.47 +0.2 769,568 + Dshi_0759 0.50 -0.2 769,618 - Dshi_0759 0.63 +0.3 769,699 + Dshi_0759 0.85 -1.5
Or see this region's nucleotide sequence