Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0739 and Dshi_0740 are separated by 93 nucleotides Dshi_0740 and Dshi_0741 are separated by 39 nucleotides Dshi_0741 and Dshi_0742 overlap by 4 nucleotides
Dshi_0739: Dshi_0739 - Ppx/GppA phosphatase (RefSeq), at 744,912 to 746,432
_0739
Dshi_0740: Dshi_0740 - Polyphosphate kinase (RefSeq), at 746,526 to 748,700
_0740
Dshi_0741: Dshi_0741 - chromosomal replication initiator, DnaA (RefSeq), at 748,740 to 749,429
_0741
Dshi_0742: Dshi_0742 - protein of unknown function UPF0118 (RefSeq), at 749,426 to 750,511
_0742
Position (kb) 746
747
748
749 Strain fitness (log2 ratio) -1
0
1
2 at 745.643 kb on + strand, within Dshi_0739 at 745.683 kb on - strand, within Dshi_0739 at 745.990 kb on + strand, within Dshi_0739 at 746.185 kb on - strand, within Dshi_0739 at 746.309 kb on + strand at 746.455 kb on - strand at 746.524 kb on + strand at 746.617 kb on - strand at 746.642 kb on + strand at 746.680 kb on + strand at 746.688 kb on - strand at 746.872 kb on + strand, within Dshi_0740 at 746.939 kb on - strand, within Dshi_0740 at 746.939 kb on - strand, within Dshi_0740 at 747.060 kb on - strand, within Dshi_0740 at 747.152 kb on + strand, within Dshi_0740 at 747.205 kb on - strand, within Dshi_0740 at 747.250 kb on + strand, within Dshi_0740 at 747.250 kb on + strand, within Dshi_0740 at 747.258 kb on - strand, within Dshi_0740 at 747.265 kb on + strand, within Dshi_0740 at 747.296 kb on + strand, within Dshi_0740 at 747.386 kb on - strand, within Dshi_0740 at 747.474 kb on - strand, within Dshi_0740 at 747.585 kb on - strand, within Dshi_0740 at 747.611 kb on - strand, within Dshi_0740 at 747.620 kb on - strand, within Dshi_0740 at 748.116 kb on - strand, within Dshi_0740 at 748.197 kb on + strand, within Dshi_0740 at 748.222 kb on + strand, within Dshi_0740 at 748.390 kb on - strand, within Dshi_0740 at 748.576 kb on - strand at 748.604 kb on + strand at 748.650 kb on - strand at 748.674 kb on - strand at 749.487 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 745,643 + Dshi_0739 0.48 +1.5 745,683 - Dshi_0739 0.51 +0.1 745,990 + Dshi_0739 0.71 +0.1 746,185 - Dshi_0739 0.84 +0.3 746,309 + -0.7 746,455 - +0.3 746,524 + -1.2 746,617 - -0.1 746,642 + +0.4 746,680 + +2.2 746,688 - +0.5 746,872 + Dshi_0740 0.16 +1.4 746,939 - Dshi_0740 0.19 +1.1 746,939 - Dshi_0740 0.19 +0.8 747,060 - Dshi_0740 0.25 +1.5 747,152 + Dshi_0740 0.29 +0.4 747,205 - Dshi_0740 0.31 +0.8 747,250 + Dshi_0740 0.33 +0.5 747,250 + Dshi_0740 0.33 +0.6 747,258 - Dshi_0740 0.34 +1.8 747,265 + Dshi_0740 0.34 +0.3 747,296 + Dshi_0740 0.35 +1.0 747,386 - Dshi_0740 0.40 -0.0 747,474 - Dshi_0740 0.44 +0.7 747,585 - Dshi_0740 0.49 -0.0 747,611 - Dshi_0740 0.50 +0.8 747,620 - Dshi_0740 0.50 +0.7 748,116 - Dshi_0740 0.73 +0.4 748,197 + Dshi_0740 0.77 +0.4 748,222 + Dshi_0740 0.78 +0.4 748,390 - Dshi_0740 0.86 +0.8 748,576 - +2.7 748,604 + +1.0 748,650 - +0.1 748,674 - +1.0 749,487 + -0.5
Or see this region's nucleotide sequence