Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0657 and Dshi_0658 overlap by 4 nucleotides Dshi_0658 and Dshi_0659 are separated by 177 nucleotides
Dshi_0657: Dshi_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 659,994 to 661,172
_0657
Dshi_0658: Dshi_0658 - ABC transporter related (RefSeq), at 661,169 to 662,770
_0658
Dshi_0659: Dshi_0659 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 662,948 to 664,309
_0659
Position (kb) 661
662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 660.316 kb on + strand, within Dshi_0657 at 660.334 kb on + strand, within Dshi_0657 at 660.342 kb on - strand, within Dshi_0657 at 660.368 kb on + strand, within Dshi_0657 at 660.416 kb on + strand, within Dshi_0657 at 660.433 kb on - strand, within Dshi_0657 at 660.633 kb on + strand, within Dshi_0657 at 660.756 kb on - strand, within Dshi_0657 at 660.772 kb on - strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.810 kb on - strand, within Dshi_0657 at 660.900 kb on + strand, within Dshi_0657 at 661.235 kb on - strand at 661.254 kb on + strand at 661.254 kb on + strand at 661.368 kb on - strand, within Dshi_0658 at 661.394 kb on - strand, within Dshi_0658 at 661.521 kb on + strand, within Dshi_0658 at 661.673 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.853 kb on - strand, within Dshi_0658 at 661.886 kb on + strand, within Dshi_0658 at 661.991 kb on - strand, within Dshi_0658 at 662.026 kb on + strand, within Dshi_0658 at 662.103 kb on + strand, within Dshi_0658 at 662.104 kb on - strand, within Dshi_0658 at 662.172 kb on + strand, within Dshi_0658 at 662.214 kb on - strand, within Dshi_0658 at 662.261 kb on - strand, within Dshi_0658 at 662.273 kb on + strand, within Dshi_0658 at 662.311 kb on + strand, within Dshi_0658 at 662.319 kb on - strand, within Dshi_0658 at 662.348 kb on - strand, within Dshi_0658 at 662.352 kb on + strand, within Dshi_0658 at 662.509 kb on - strand, within Dshi_0658 at 662.590 kb on + strand, within Dshi_0658 at 662.590 kb on + strand, within Dshi_0658 at 662.591 kb on + strand, within Dshi_0658 at 662.613 kb on + strand at 662.613 kb on + strand at 662.613 kb on + strand at 662.614 kb on + strand at 662.637 kb on + strand at 662.845 kb on + strand at 663.037 kb on + strand at 663.099 kb on - strand, within Dshi_0659 at 663.112 kb on - strand, within Dshi_0659 at 663.116 kb on + strand, within Dshi_0659 at 663.122 kb on - strand, within Dshi_0659 at 663.246 kb on - strand, within Dshi_0659 at 663.301 kb on + strand, within Dshi_0659 at 663.311 kb on - strand, within Dshi_0659 at 663.312 kb on + strand, within Dshi_0659 at 663.375 kb on - strand, within Dshi_0659 at 663.508 kb on + strand, within Dshi_0659 at 663.516 kb on - strand, within Dshi_0659 at 663.520 kb on + strand, within Dshi_0659 at 663.530 kb on + strand, within Dshi_0659
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 660,316 + Dshi_0657 0.27 -0.1 660,334 + Dshi_0657 0.29 -1.7 660,342 - Dshi_0657 0.30 -1.3 660,368 + Dshi_0657 0.32 -1.6 660,416 + Dshi_0657 0.36 -0.9 660,433 - Dshi_0657 0.37 +0.6 660,633 + Dshi_0657 0.54 -1.0 660,756 - Dshi_0657 0.65 -0.8 660,772 - Dshi_0657 0.66 -1.2 660,792 + Dshi_0657 0.68 -1.5 660,792 + Dshi_0657 0.68 -3.2 660,792 + Dshi_0657 0.68 -0.8 660,810 - Dshi_0657 0.69 -0.8 660,900 + Dshi_0657 0.77 -3.1 661,235 - -0.8 661,254 + -1.7 661,254 + -0.6 661,368 - Dshi_0658 0.12 -2.1 661,394 - Dshi_0658 0.14 -2.0 661,521 + Dshi_0658 0.22 -0.4 661,673 - Dshi_0658 0.31 -1.2 661,811 - Dshi_0658 0.40 +0.1 661,811 - Dshi_0658 0.40 -1.8 661,853 - Dshi_0658 0.43 -0.2 661,886 + Dshi_0658 0.45 -0.3 661,991 - Dshi_0658 0.51 -2.2 662,026 + Dshi_0658 0.53 +0.5 662,103 + Dshi_0658 0.58 -1.3 662,104 - Dshi_0658 0.58 -1.2 662,172 + Dshi_0658 0.63 -0.1 662,214 - Dshi_0658 0.65 -1.1 662,261 - Dshi_0658 0.68 -1.9 662,273 + Dshi_0658 0.69 -1.0 662,311 + Dshi_0658 0.71 -1.2 662,319 - Dshi_0658 0.72 -2.7 662,348 - Dshi_0658 0.74 -0.3 662,352 + Dshi_0658 0.74 -2.6 662,509 - Dshi_0658 0.84 -0.3 662,590 + Dshi_0658 0.89 -1.0 662,590 + Dshi_0658 0.89 -3.1 662,591 + Dshi_0658 0.89 -0.0 662,613 + -0.7 662,613 + -1.1 662,613 + -2.3 662,614 + -0.6 662,637 + -0.9 662,845 + -0.3 663,037 + -0.6 663,099 - Dshi_0659 0.11 -0.1 663,112 - Dshi_0659 0.12 -0.6 663,116 + Dshi_0659 0.12 +0.0 663,122 - Dshi_0659 0.13 +0.1 663,246 - Dshi_0659 0.22 -1.7 663,301 + Dshi_0659 0.26 -0.6 663,311 - Dshi_0659 0.27 -0.6 663,312 + Dshi_0659 0.27 +0.2 663,375 - Dshi_0659 0.31 -0.5 663,508 + Dshi_0659 0.41 +0.6 663,516 - Dshi_0659 0.42 -0.3 663,520 + Dshi_0659 0.42 -0.6 663,530 + Dshi_0659 0.43 -0.7
Or see this region's nucleotide sequence