Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5280

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
6,070,534	+		Pf6N2E2_5278	0.51	-2.9
6,070,535	-		Pf6N2E2_5278	0.51	-0.6
6,070,535	-		Pf6N2E2_5278	0.51	+0.2
6,070,671	+		Pf6N2E2_5278	0.80	-0.1
6,070,671	+		Pf6N2E2_5278	0.80	-0.2
6,070,672	-		Pf6N2E2_5278	0.80	+0.9
6,070,682	-		Pf6N2E2_5278	0.82	-0.5
6,070,682	-		Pf6N2E2_5278	0.82	-2.1
6,070,791	+				-0.1
6,070,791	+				-1.1
6,070,791	+				+0.0
6,070,792	-				+0.3
6,070,792	-				+0.1
6,070,792	-				-1.0
6,070,792	-				-0.3
6,070,880	+				-0.7
6,070,880	+				-1.0
6,070,880	+				+0.3
6,070,880	+				-1.3
6,070,881	-				+0.4
6,070,881	-				-0.9
6,070,881	-				+1.2
6,070,881	-				+0.6
6,070,881	-				+1.3
6,070,883	+				-0.6
6,070,884	-				-0.5
6,070,884	-				-0.1
6,070,884	-				-0.9
6,070,949	+				-0.1
6,070,949	+				+1.8
6,070,949	+				-0.1
6,070,949	+				-0.2
6,070,950	-				-0.7
6,070,950	-				-0.1
6,070,950	-				+0.5
6,071,129	+		Pf6N2E2_5279	0.46	+0.9
6,071,130	-		Pf6N2E2_5279	0.46	+0.7
6,071,207	+		Pf6N2E2_5279	0.63	-0.2
6,071,207	+		Pf6N2E2_5279	0.63	-0.3
6,071,207	+		Pf6N2E2_5279	0.63	-0.5
6,071,208	-		Pf6N2E2_5279	0.63	-0.3
6,071,268	+		Pf6N2E2_5279	0.77	-0.4
6,071,269	-		Pf6N2E2_5279	0.77	+0.5
6,071,402	+				-0.5
6,071,402	+				-0.5
6,071,402	+				+1.1
6,071,423	+				-0.5
6,071,446	-				-0.7
6,071,446	-				-2.4
6,071,463	+				+0.3
6,071,463	+				-0.5
6,071,464	-				+1.5
6,071,464	-				-0.6
6,071,464	-				-0.0
6,071,464	-				+1.0
6,071,464	-				-1.1
6,071,484	+				-0.4
6,071,484	+				-0.2
6,071,484	+				+1.2
6,071,484	+				-0.4
6,071,484	+				-0.3
6,071,484	+				+0.6
6,071,484	+				-1.2
6,071,484	+				+0.1
6,071,484	+				-0.5
6,071,484	+				+0.0
6,071,484	+				-0.5
6,071,485	-				-0.5
6,071,485	-				+0.1
6,071,485	-				+0.7
6,071,486	+				-1.0
6,071,486	+				+0.3
6,071,486	+				+0.9
6,071,487	-				-1.2
6,071,487	-				-1.1
6,071,487	-				+1.0
6,071,648	+		Pf6N2E2_5280	0.17	+0.0
6,071,648	+		Pf6N2E2_5280	0.17	-0.9
6,071,649	-		Pf6N2E2_5280	0.18	+0.3
6,071,649	-		Pf6N2E2_5280	0.18	+0.5
6,071,649	-		Pf6N2E2_5280	0.18	-1.4
6,071,649	-		Pf6N2E2_5280	0.18	+0.1
6,071,797	-		Pf6N2E2_5280	0.37	-1.6
6,071,824	+		Pf6N2E2_5280	0.40	-0.3
6,071,946	+		Pf6N2E2_5280	0.56	-1.0
6,071,946	+		Pf6N2E2_5280	0.56	-0.2
6,071,946	+		Pf6N2E2_5280	0.56	-0.1
6,071,947	-		Pf6N2E2_5280	0.56	-2.0
6,071,947	-		Pf6N2E2_5280	0.56	-0.4
6,071,947	-		Pf6N2E2_5280	0.56	-1.8
6,071,956	-		Pf6N2E2_5280	0.57	+0.0
6,071,956	-		Pf6N2E2_5280	0.57	-0.7
6,072,319	+				+0.6
6,072,320	-				+0.1
6,072,320	-				-0.3
6,072,443	+		Pf6N2E2_5281	0.17	+0.5
6,072,443	+		Pf6N2E2_5281	0.17	+0.3
6,072,443	+		Pf6N2E2_5281	0.17	+0.3
6,072,444	-		Pf6N2E2_5281	0.17	+1.8
6,072,444	-		Pf6N2E2_5281	0.17	+0.0
6,072,444	-		Pf6N2E2_5281	0.17	-0.1
6,072,444	-		Pf6N2E2_5281	0.17	+1.2
6,072,533	+		Pf6N2E2_5281	0.27	+0.6
6,072,533	+		Pf6N2E2_5281	0.27	+0.2
6,072,534	-		Pf6N2E2_5281	0.27	-0.7
6,072,620	+		Pf6N2E2_5281	0.36	+0.2
6,072,620	+		Pf6N2E2_5281	0.36	+0.4
6,072,628	+		Pf6N2E2_5281	0.37	-1.1
6,072,660	-		Pf6N2E2_5281	0.41	-0.1
6,072,660	-		Pf6N2E2_5281	0.41	-0.2
6,072,845	-		Pf6N2E2_5281	0.61	+0.9
6,072,858	+		Pf6N2E2_5281	0.63	-0.2
6,072,858	+		Pf6N2E2_5281	0.63	+0.1
6,072,858	+		Pf6N2E2_5281	0.63	+0.2
6,072,858	+		Pf6N2E2_5281	0.63	+2.1
6,072,859	-		Pf6N2E2_5281	0.63	-1.0
6,072,859	-		Pf6N2E2_5281	0.63	+0.8
6,072,923	+		Pf6N2E2_5281	0.70	-0.1
6,072,923	+		Pf6N2E2_5281	0.70	-0.3
6,072,923	+		Pf6N2E2_5281	0.70	+0.2
6,072,923	+		Pf6N2E2_5281	0.70	-0.3
6,072,923	+		Pf6N2E2_5281	0.70	+2.7
6,072,923	+		Pf6N2E2_5281	0.70	-0.0
6,072,923	+		Pf6N2E2_5281	0.70	-0.5
6,072,923	+		Pf6N2E2_5281	0.70	+0.0
6,072,924	-		Pf6N2E2_5281	0.70	+0.4
6,072,924	-		Pf6N2E2_5281	0.70	-0.2
6,072,924	-		Pf6N2E2_5281	0.70	-0.5
6,072,924	-		Pf6N2E2_5281	0.70	+1.0
6,072,924	-		Pf6N2E2_5281	0.70	-1.0
6,072,924	-		Pf6N2E2_5281	0.70	-0.9
6,072,924	-		Pf6N2E2_5281	0.70	-0.5
6,072,924	-		Pf6N2E2_5281	0.70	+0.2
6,072,924	-		Pf6N2E2_5281	0.70	-0.2
6,072,924	-		Pf6N2E2_5281	0.70	+0.9
6,072,926	-		Pf6N2E2_5281	0.70	-0.3
6,073,139	+				-1.3
6,073,139	+				+0.6
6,073,140	-				+1.8
6,073,140	-				-0.2
6,073,140	-				-0.2
6,073,199	+				-0.5
6,073,200	-				+0.4
6,073,250	-				+0.2
6,073,250	-				+1.1
6,073,250	-				+0.4
6,073,250	-				+0.8
6,073,250	-				+0.6
6,073,250	-				-1.5