Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4455

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
5,187,350	+		Pf6N2E2_4454	0.62	-0.6
5,187,350	+		Pf6N2E2_4454	0.62	-1.1
5,187,350	+		Pf6N2E2_4454	0.62	-1.1
5,187,351	-		Pf6N2E2_4454	0.62	-0.5
5,187,351	-		Pf6N2E2_4454	0.62	+2.4
5,187,351	-		Pf6N2E2_4454	0.62	-0.5
5,187,352	+		Pf6N2E2_4454	0.62	-0.3
5,187,352	+		Pf6N2E2_4454	0.62	-1.8
5,187,352	+		Pf6N2E2_4454	0.62	+1.4
5,187,353	-		Pf6N2E2_4454	0.62	-0.1
5,187,353	-		Pf6N2E2_4454	0.62	-0.1
5,187,398	-		Pf6N2E2_4454	0.65	-1.0
5,187,409	+		Pf6N2E2_4454	0.66	-0.5
5,187,410	-		Pf6N2E2_4454	0.66	+1.5
5,187,692	+		Pf6N2E2_4454	0.85	-1.5
5,187,693	-		Pf6N2E2_4454	0.85	+0.7
5,188,109	+				-0.7
5,188,109	+				+0.6
5,188,180	+				+0.1
5,188,180	+				-1.1
5,188,591	+		Pf6N2E2_4455	0.57	-0.2
5,188,591	+		Pf6N2E2_4455	0.57	-0.5
5,188,591	+		Pf6N2E2_4455	0.57	-0.9
5,188,592	-		Pf6N2E2_4455	0.57	-0.5
5,188,592	-		Pf6N2E2_4455	0.57	-2.5
5,188,712	+		Pf6N2E2_4455	0.73	-0.2
5,188,712	+		Pf6N2E2_4455	0.73	+0.2
5,188,713	-		Pf6N2E2_4455	0.73	-0.1
5,188,872	-				-0.2
5,188,872	-				-0.4
5,188,874	+				-0.0
5,188,874	+				+1.4
5,188,874	+				-0.2
5,188,874	+				+1.5
5,188,875	-				-0.3
5,188,875	-				-0.1
5,188,875	-				-0.3
5,188,875	-				-0.3
5,188,875	-				-0.4
5,188,875	-				+1.3
5,188,878	+				-0.3
5,188,879	-				+0.6
5,188,879	-				+0.7
5,188,879	-				-0.7
5,188,879	-				+0.4
5,188,896	+				-0.1
5,188,896	+				+0.7
5,188,896	+				+0.3
5,188,897	-				-1.7
5,188,897	-				-0.9
5,188,897	-				-0.5
5,188,897	-				-0.3
5,188,965	+		Pf6N2E2_4456	0.11	+0.1
5,188,965	+		Pf6N2E2_4456	0.11	-0.8
5,188,966	-		Pf6N2E2_4456	0.11	+0.3
5,188,986	+		Pf6N2E2_4456	0.14	-0.8
5,188,987	-		Pf6N2E2_4456	0.14	+0.0
5,188,987	-		Pf6N2E2_4456	0.14	+0.8
5,188,987	-		Pf6N2E2_4456	0.14	-1.3
5,189,149	-		Pf6N2E2_4456	0.39	+0.9
5,189,248	-		Pf6N2E2_4456	0.54	-0.3
5,189,258	-		Pf6N2E2_4456	0.56	+0.9
5,189,258	-		Pf6N2E2_4456	0.56	-0.5
5,189,379	+		Pf6N2E2_4456	0.74	+0.4
5,189,379	+		Pf6N2E2_4456	0.74	-0.5
5,189,379	+		Pf6N2E2_4456	0.74	+0.4
5,189,379	+		Pf6N2E2_4456	0.74	+1.1
5,189,379	+		Pf6N2E2_4456	0.74	-1.1
5,189,380	-		Pf6N2E2_4456	0.75	+0.3
5,189,380	-		Pf6N2E2_4456	0.75	-0.6
5,189,570	+				-0.2
5,189,570	+				+0.8
5,189,570	+				+1.0
5,189,570	+				+0.3
5,189,571	-				+0.6
5,189,630	+		Pf6N2E2_4457	0.13	-1.0
5,189,630	+		Pf6N2E2_4457	0.13	-1.5
5,189,631	-		Pf6N2E2_4457	0.13	+1.1
5,189,651	+		Pf6N2E2_4457	0.16	-0.6
5,189,652	-		Pf6N2E2_4457	0.16	-0.0
5,189,652	-		Pf6N2E2_4457	0.16	+0.5
5,189,673	+		Pf6N2E2_4457	0.19	+0.2
5,189,673	+		Pf6N2E2_4457	0.19	-0.3
5,189,674	-		Pf6N2E2_4457	0.19	+0.4