Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3792

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
4,416,635	+		Pf6N2E2_3791	0.64	-0.3
4,416,705	+		Pf6N2E2_3791	0.67	-1.1
4,416,717	+		Pf6N2E2_3791	0.68	+1.0
4,416,718	-		Pf6N2E2_3791	0.68	+0.9
4,416,811	+		Pf6N2E2_3791	0.71	-3.1
4,416,812	-		Pf6N2E2_3791	0.71	-0.5
4,416,900	-		Pf6N2E2_3791	0.75	-1.4
4,417,091	+		Pf6N2E2_3791	0.82	-0.0
4,417,113	-		Pf6N2E2_3791	0.83	+0.3
4,417,160	+		Pf6N2E2_3791	0.85	+0.2
4,417,182	+		Pf6N2E2_3791	0.86	+1.2
4,417,183	-		Pf6N2E2_3791	0.86	-0.4
4,417,547	+				-0.1
4,417,547	+				-1.0
4,417,547	+				+0.2
4,417,548	-				-0.5
4,417,548	-				+1.0
4,417,578	+				-0.7
4,417,578	+				-0.9
4,417,578	+				-1.7
4,417,578	+				-0.9
4,417,578	+				+0.6
4,417,578	+				-0.4
4,417,578	+				+0.1
4,417,578	+				+0.1
4,417,579	-				-1.6
4,417,579	-				-1.3
4,417,579	-				-0.3
4,417,579	-				-1.5
4,417,579	-				-1.0
4,417,579	-				-0.2
4,417,579	-				-1.9
4,417,579	-				-0.4
4,417,581	+				-1.1
4,417,581	+				+0.1
4,417,581	+				-1.0
4,417,581	+				-0.5
4,417,582	-				-0.7
4,417,582	-				-1.0
4,417,582	-				-0.5
4,417,603	-				-1.2
4,417,603	-				-0.7
4,417,917	+		Pf6N2E2_3792	0.19	-2.2
4,417,918	-		Pf6N2E2_3792	0.19	-0.6
4,418,029	-		Pf6N2E2_3792	0.26	-1.5
4,418,029	-		Pf6N2E2_3792	0.26	-0.7
4,418,029	-		Pf6N2E2_3792	0.26	+0.3
4,418,029	-		Pf6N2E2_3792	0.26	-0.2
4,418,344	-		Pf6N2E2_3792	0.44	+0.5
4,418,509	-		Pf6N2E2_3792	0.53	-0.0
4,418,509	-		Pf6N2E2_3792	0.53	-0.4
4,418,509	-		Pf6N2E2_3792	0.53	-0.0
4,418,841	+		Pf6N2E2_3792	0.72	-1.5
4,418,842	-		Pf6N2E2_3792	0.72	-1.5
4,418,985	+		Pf6N2E2_3792	0.81	-0.8
4,418,985	+		Pf6N2E2_3792	0.81	-0.0
4,418,985	+		Pf6N2E2_3792	0.81	-0.2
4,418,986	-		Pf6N2E2_3792	0.81	-1.1
4,418,986	-		Pf6N2E2_3792	0.81	+0.2
4,418,986	-		Pf6N2E2_3792	0.81	-0.1
4,419,060	+		Pf6N2E2_3792	0.85	-0.4
4,419,060	+		Pf6N2E2_3792	0.85	-0.9
4,419,224	+				+1.1
4,419,335	-				-0.2
4,419,397	-				+1.9
4,419,401	+				-1.3
4,419,401	+				-1.8
4,419,401	+				-0.7
4,419,402	-				+1.1
4,419,402	-				+1.1
4,419,402	-				-1.5
4,419,402	-				-0.8
4,419,520	+				-0.9
4,419,521	-				+1.1
4,419,521	-				-1.8
4,419,524	+				-1.4
4,419,524	+				-2.6
4,419,525	-				+0.0
4,419,525	-				+1.3
4,419,569	+				-1.0
4,419,569	+				-1.0
4,419,574	-				+1.3
4,419,574	-				-1.2
4,419,574	-				+0.4
4,419,576	+				-1.9
4,419,577	-				-0.5
4,419,610	+				-2.4
4,419,610	+				-1.2
4,419,610	+				-1.2
4,419,610	+				-1.4
4,419,611	-				+0.6
4,419,682	+				-1.0
4,419,742	-		Pf6N2E2_3793	0.16	-0.5
4,419,788	+		Pf6N2E2_3793	0.26	+0.4
4,419,788	+		Pf6N2E2_3793	0.26	-2.0
4,419,788	+		Pf6N2E2_3793	0.26	+0.6
4,419,789	-		Pf6N2E2_3793	0.26	+0.5
4,419,789	-		Pf6N2E2_3793	0.26	+0.9
4,419,789	-		Pf6N2E2_3793	0.26	+0.7
4,419,789	-		Pf6N2E2_3793	0.26	+1.2
4,419,956	+		Pf6N2E2_3793	0.65	+0.2
4,419,957	-		Pf6N2E2_3793	0.65	-0.1
4,419,960	+		Pf6N2E2_3793	0.66	-0.7
4,419,960	+		Pf6N2E2_3793	0.66	-0.1
4,419,961	-		Pf6N2E2_3793	0.66	+1.3
4,419,961	-		Pf6N2E2_3793	0.66	-0.7
4,419,969	+		Pf6N2E2_3793	0.68	-0.7
4,419,969	+		Pf6N2E2_3793	0.68	-0.7
4,419,969	+		Pf6N2E2_3793	0.68	+0.3
4,419,970	-		Pf6N2E2_3793	0.68	+1.6
4,419,970	-		Pf6N2E2_3793	0.68	-0.2
4,420,066	+		Pf6N2E2_3793	0.90	-1.0
4,420,067	-				+0.2