Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2997

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
3,487,219	-				-0.3
3,487,280	+		Pf6N2E2_2996	0.14	-0.3
3,487,436	+		Pf6N2E2_2996	0.42	+1.0
3,487,436	+		Pf6N2E2_2996	0.42	-0.6
3,487,436	+		Pf6N2E2_2996	0.42	-0.9
3,487,436	+		Pf6N2E2_2996	0.42	-1.9
3,487,437	-		Pf6N2E2_2996	0.42	-0.2
3,487,437	-		Pf6N2E2_2996	0.42	+0.6
3,487,447	+		Pf6N2E2_2996	0.44	-1.6
3,487,448	-		Pf6N2E2_2996	0.44	-1.3
3,487,448	-		Pf6N2E2_2996	0.44	+0.6
3,487,448	-		Pf6N2E2_2996	0.44	+0.6
3,487,490	-		Pf6N2E2_2996	0.51	+0.6
3,487,555	+		Pf6N2E2_2996	0.63	-1.4
3,487,555	+		Pf6N2E2_2996	0.63	-0.5
3,487,555	+		Pf6N2E2_2996	0.63	+0.7
3,487,555	+		Pf6N2E2_2996	0.63	+1.1
3,487,556	-		Pf6N2E2_2996	0.63	-1.2
3,487,556	-		Pf6N2E2_2996	0.63	+0.2
3,487,556	-		Pf6N2E2_2996	0.63	-0.6
3,487,567	+		Pf6N2E2_2996	0.65	+0.2
3,487,567	+		Pf6N2E2_2996	0.65	-0.4
3,487,594	+		Pf6N2E2_2996	0.70	-0.6
3,487,595	-		Pf6N2E2_2996	0.70	-1.4
3,487,739	+				+0.3
3,487,739	+				+0.7
3,487,740	-				-0.0
3,487,740	-				-0.3
3,487,740	-				+0.5
3,487,755	-				+0.6
3,487,763	+				+0.7
3,487,764	-				-0.3
3,487,833	-				+0.4
3,487,883	-				-0.8
3,487,900	+				+0.2
3,487,900	+				+1.8
3,487,901	-				+0.7
3,487,901	-				-0.2
3,487,901	-				+0.4
3,487,901	-				+0.6
3,487,901	-				-0.1
3,487,901	-				+0.2
3,487,901	-				+0.4
3,487,901	-				+0.4
3,487,901	-				+1.5
3,488,014	+				-1.0
3,488,014	+				-0.3
3,488,014	+				+0.2
3,488,015	-				-0.8
3,488,015	-				+0.5
3,488,019	-				+0.6
3,488,019	-				+0.1
3,488,019	-				-0.2
3,488,083	-		Pf6N2E2_2997	0.17	+0.2
3,488,100	+		Pf6N2E2_2997	0.21	+1.6
3,488,102	+		Pf6N2E2_2997	0.22	-1.0
3,488,102	+		Pf6N2E2_2997	0.22	-0.2
3,488,102	+		Pf6N2E2_2997	0.22	+0.8
3,488,102	+		Pf6N2E2_2997	0.22	+1.1
3,488,103	-		Pf6N2E2_2997	0.22	+0.5
3,488,103	-		Pf6N2E2_2997	0.22	+0.4
3,488,103	-		Pf6N2E2_2997	0.22	+1.2
3,488,166	-		Pf6N2E2_2997	0.38	-0.4
3,488,166	-		Pf6N2E2_2997	0.38	+2.4
3,488,179	+		Pf6N2E2_2997	0.42	+0.7
3,488,182	-		Pf6N2E2_2997	0.42	+0.2
3,488,182	-		Pf6N2E2_2997	0.42	+0.0
3,488,182	-		Pf6N2E2_2997	0.42	+1.3
3,488,290	-		Pf6N2E2_2997	0.70	+0.3
3,488,290	-		Pf6N2E2_2997	0.70	+0.8
3,488,294	+		Pf6N2E2_2997	0.71	-1.7
3,488,294	+		Pf6N2E2_2997	0.71	+0.6
3,488,294	+		Pf6N2E2_2997	0.71	-0.0
3,488,294	+		Pf6N2E2_2997	0.71	+0.5
3,488,294	+		Pf6N2E2_2997	0.71	+0.4
3,488,294	+		Pf6N2E2_2997	0.71	+0.5
3,488,294	+		Pf6N2E2_2997	0.71	-0.6
3,488,295	-		Pf6N2E2_2997	0.71	+2.0
3,488,295	-		Pf6N2E2_2997	0.71	+0.3
3,488,295	-		Pf6N2E2_2997	0.71	+1.8
3,488,295	-		Pf6N2E2_2997	0.71	-0.7
3,488,295	-		Pf6N2E2_2997	0.71	+3.0
3,488,295	-		Pf6N2E2_2997	0.71	+0.4
3,488,295	-		Pf6N2E2_2997	0.71	+0.0
3,488,295	-		Pf6N2E2_2997	0.71	+0.9
3,488,323	+		Pf6N2E2_2997	0.78	+0.7
3,488,323	+		Pf6N2E2_2997	0.78	+0.5
3,488,324	-		Pf6N2E2_2997	0.79	+0.7
3,488,324	-		Pf6N2E2_2997	0.79	+1.6
3,488,324	-		Pf6N2E2_2997	0.79	-0.1
3,488,421	+				+0.8
3,488,421	+				-1.3
3,488,422	-				+0.2
3,488,422	-				+0.6
3,488,439	+				-0.6
3,488,439	+				-0.1
3,488,440	-				+0.6
3,488,440	-				+0.0
3,488,440	-				-0.1
3,488,440	-				-0.2
3,488,487	+				-1.2
3,488,488	-				-0.3
3,488,563	+				+0.4
3,488,563	+				-0.3
3,488,563	+				-0.4
3,488,563	+				+0.9
3,488,563	+				+1.0
3,488,564	-				+0.9
3,488,570	+				+0.1
3,488,571	-				+0.3
3,488,571	-				+0.2
3,488,597	+				-0.4
3,488,597	+				-1.6
3,488,644	-				+0.8
3,488,653	+				+1.0
3,488,654	-				+0.5
3,488,654	-				-0.4
3,488,654	-				+0.6
3,488,827	+		Pf6N2E2_2998	0.22	-0.4
3,488,828	-		Pf6N2E2_2998	0.22	+1.3
3,488,934	-		Pf6N2E2_2998	0.32	+0.4
3,489,124	+		Pf6N2E2_2998	0.49	-0.1
3,489,124	+		Pf6N2E2_2998	0.49	+0.1
3,489,124	+		Pf6N2E2_2998	0.49	-0.4
3,489,125	-		Pf6N2E2_2998	0.49	-0.6
3,489,125	-		Pf6N2E2_2998	0.49	-0.2
3,489,200	+		Pf6N2E2_2998	0.56	+0.3
3,489,200	+		Pf6N2E2_2998	0.56	-0.8
3,489,200	+		Pf6N2E2_2998	0.56	-0.4
3,489,200	+		Pf6N2E2_2998	0.56	+1.0
3,489,201	-		Pf6N2E2_2998	0.56	-2.4
3,489,203	+		Pf6N2E2_2998	0.56	+0.6
3,489,203	+		Pf6N2E2_2998	0.56	+1.3
3,489,203	+		Pf6N2E2_2998	0.56	+0.8
3,489,204	-		Pf6N2E2_2998	0.57	+0.4
3,489,204	-		Pf6N2E2_2998	0.57	+0.2
3,489,204	-		Pf6N2E2_2998	0.57	+0.9
3,489,208	+		Pf6N2E2_2998	0.57	+0.5
3,489,208	+		Pf6N2E2_2998	0.57	+0.8
3,489,208	+		Pf6N2E2_2998	0.57	+0.1
3,489,209	-		Pf6N2E2_2998	0.57	-0.0
3,489,209	-		Pf6N2E2_2998	0.57	-0.2
3,489,389	+		Pf6N2E2_2998	0.73	+0.0
3,489,390	-		Pf6N2E2_2998	0.74	-1.7