Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1175

Experiment: Hydroxide 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxide 0.05 M
1,374,337	+		Pf6N2E2_1174	0.35	+0.5
1,374,456	+		Pf6N2E2_1174	0.46	+0.3
1,374,457	-		Pf6N2E2_1174	0.47	+0.1
1,374,469	+		Pf6N2E2_1174	0.48	+2.3
1,374,488	+		Pf6N2E2_1174	0.49	+0.8
1,374,488	+		Pf6N2E2_1174	0.49	+0.6
1,374,595	-		Pf6N2E2_1174	0.60	+0.5
1,374,681	-		Pf6N2E2_1174	0.68	+1.0
1,374,711	-		Pf6N2E2_1174	0.71	+0.1
1,374,711	-		Pf6N2E2_1174	0.71	-0.2
1,374,711	-		Pf6N2E2_1174	0.71	+0.6
1,374,711	-		Pf6N2E2_1174	0.71	-0.9
1,374,772	-		Pf6N2E2_1174	0.76	-0.1
1,374,794	+		Pf6N2E2_1174	0.78	-0.4
1,374,816	+		Pf6N2E2_1174	0.80	+0.9
1,374,817	-		Pf6N2E2_1174	0.81	+0.3
1,374,817	-		Pf6N2E2_1174	0.81	+1.0
1,374,861	+		Pf6N2E2_1174	0.85	+0.1
1,374,862	-		Pf6N2E2_1174	0.85	+1.5
1,374,862	-		Pf6N2E2_1174	0.85	+0.3
1,374,862	-		Pf6N2E2_1174	0.85	-1.6
1,374,946	+				+0.5
1,374,946	+				+1.5
1,374,947	-				-0.8
1,374,996	+				+1.8
1,374,997	-				+0.3
1,374,997	-				-0.6
1,374,997	-				+0.0
1,374,997	-				-0.7
1,375,056	-				-0.2
1,375,108	+				+0.6
1,375,136	+				-0.4
1,375,136	+				+0.6
1,375,136	+				-1.5
1,375,136	+				+0.0
1,375,167	+				-0.0
1,375,207	-				+1.9
1,375,207	-				+1.9
1,375,207	-				+1.8
1,375,281	+				+0.7
1,375,487	+				+1.2
1,375,487	+				-0.7
1,375,487	+				-0.3
1,375,727	+		Pf6N2E2_1175	0.20	-0.8
1,375,727	+		Pf6N2E2_1175	0.20	-1.6
1,375,793	+		Pf6N2E2_1175	0.23	+0.3
1,375,793	+		Pf6N2E2_1175	0.23	-0.3
1,375,793	+		Pf6N2E2_1175	0.23	-1.0
1,375,794	-		Pf6N2E2_1175	0.23	+0.4
1,375,794	-		Pf6N2E2_1175	0.23	-0.4
1,375,794	-		Pf6N2E2_1175	0.23	-0.2
1,375,794	-		Pf6N2E2_1175	0.23	-0.6
1,375,796	+		Pf6N2E2_1175	0.23	-0.9
1,375,848	-		Pf6N2E2_1175	0.25	-0.4
1,375,874	+		Pf6N2E2_1175	0.26	+1.7
1,375,875	-		Pf6N2E2_1175	0.26	+1.4
1,375,932	-		Pf6N2E2_1175	0.29	+1.3
1,375,932	-		Pf6N2E2_1175	0.29	-0.3
1,376,066	+		Pf6N2E2_1175	0.35	-0.3
1,376,084	+		Pf6N2E2_1175	0.36	-0.1
1,376,084	+		Pf6N2E2_1175	0.36	+0.7
1,376,112	-		Pf6N2E2_1175	0.37	+0.1
1,376,120	-		Pf6N2E2_1175	0.37	-1.0
1,376,216	+		Pf6N2E2_1175	0.42	-0.6
1,376,244	-		Pf6N2E2_1175	0.43	-0.5
1,376,244	-		Pf6N2E2_1175	0.43	+2.2
1,376,247	+		Pf6N2E2_1175	0.43	-1.0
1,376,247	+		Pf6N2E2_1175	0.43	+0.5
1,376,247	+		Pf6N2E2_1175	0.43	-0.5
1,376,247	+		Pf6N2E2_1175	0.43	-0.6
1,376,247	+		Pf6N2E2_1175	0.43	-1.3
1,376,248	-		Pf6N2E2_1175	0.43	-0.7
1,376,248	-		Pf6N2E2_1175	0.43	+0.2
1,376,286	-		Pf6N2E2_1175	0.45	+0.7
1,377,197	-		Pf6N2E2_1175	0.86	+0.2
1,377,395	-				+1.7
1,377,395	-				-0.5
1,377,515	+				-1.5
1,377,515	+				+1.2
1,377,534	-				+0.7
1,377,546	+				+0.1
1,377,683	+		Pf6N2E2_1176	0.23	-2.4
1,377,907	+		Pf6N2E2_1176	0.80	+0.1
1,377,907	+		Pf6N2E2_1176	0.80	-0.7
1,377,908	-		Pf6N2E2_1176	0.80	+1.3
1,377,908	-		Pf6N2E2_1176	0.80	+0.3
1,377,908	-		Pf6N2E2_1176	0.80	+1.3
1,377,908	-		Pf6N2E2_1176	0.80	+0.7
1,377,973	+				+0.8
1,378,037	+				+1.6
1,378,037	+				+0.3
1,378,038	-				+0.5
1,378,096	-				+0.6
1,378,169	-		Pf6N2E2_1177	0.15	-0.3
1,378,204	-		Pf6N2E2_1177	0.18	-0.7
1,378,356	+		Pf6N2E2_1177	0.31	-0.5
1,378,356	+		Pf6N2E2_1177	0.31	-1.3