Experiment: LB_0.5%bileacids_Anaerobic_18HR_ZN21A
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_18245 and CSW01_18250 are separated by 184 nucleotides CSW01_18250 and CSW01_18255 are separated by 28 nucleotides
CSW01_18245: CSW01_18245 - magnesium transporter MgtE, at 762,457 to 763,820
_18245
CSW01_18250: CSW01_18250 - co-chaperone GroES, at 764,005 to 764,295
_18250
CSW01_18255: CSW01_18255 - molecular chaperone GroEL, at 764,324 to 765,916
_18255
Position (kb) 764
765 Strain fitness (log2 ratio) -2
-1
0
1
2 at 763.088 kb on + strand, within CSW01_18245 at 763.093 kb on + strand, within CSW01_18245 at 763.096 kb on - strand, within CSW01_18245 at 763.234 kb on + strand, within CSW01_18245 at 763.275 kb on + strand, within CSW01_18245 at 763.322 kb on + strand, within CSW01_18245 at 763.322 kb on + strand, within CSW01_18245 at 763.322 kb on + strand, within CSW01_18245 at 763.322 kb on + strand, within CSW01_18245 at 763.322 kb on + strand, within CSW01_18245 at 763.322 kb on + strand, within CSW01_18245 at 763.330 kb on - strand, within CSW01_18245 at 763.398 kb on - strand, within CSW01_18245 at 763.454 kb on + strand, within CSW01_18245 at 763.456 kb on - strand, within CSW01_18245 at 763.506 kb on + strand, within CSW01_18245 at 763.560 kb on - strand, within CSW01_18245 at 763.732 kb on + strand at 763.753 kb on - strand at 763.839 kb on + strand at 763.913 kb on + strand at 763.951 kb on + strand at 763.959 kb on - strand at 764.134 kb on + strand, within CSW01_18250 at 764.134 kb on + strand, within CSW01_18250 at 764.134 kb on + strand, within CSW01_18250 at 764.141 kb on - strand, within CSW01_18250 at 764.142 kb on - strand, within CSW01_18250 at 764.142 kb on - strand, within CSW01_18250 at 764.142 kb on - strand, within CSW01_18250 at 764.219 kb on - strand, within CSW01_18250 at 764.260 kb on - strand, within CSW01_18250 at 764.352 kb on - strand at 764.418 kb on + strand at 764.449 kb on + strand at 764.449 kb on + strand at 764.457 kb on - strand at 764.603 kb on + strand, within CSW01_18255 at 764.615 kb on + strand, within CSW01_18255 at 764.631 kb on + strand, within CSW01_18255 at 764.632 kb on + strand, within CSW01_18255 at 764.651 kb on + strand, within CSW01_18255 at 764.651 kb on + strand, within CSW01_18255 at 764.659 kb on - strand, within CSW01_18255 at 764.659 kb on - strand, within CSW01_18255 at 764.683 kb on + strand, within CSW01_18255 at 764.739 kb on - strand, within CSW01_18255 at 764.756 kb on + strand, within CSW01_18255 at 764.821 kb on + strand, within CSW01_18255 at 764.840 kb on + strand, within CSW01_18255 at 764.852 kb on + strand, within CSW01_18255 at 764.861 kb on + strand, within CSW01_18255 at 764.898 kb on - strand, within CSW01_18255 at 764.903 kb on - strand, within CSW01_18255 at 764.966 kb on - strand, within CSW01_18255 at 764.971 kb on - strand, within CSW01_18255 at 764.973 kb on - strand, within CSW01_18255 at 765.043 kb on + strand, within CSW01_18255 at 765.070 kb on - strand, within CSW01_18255 at 765.155 kb on + strand, within CSW01_18255 at 765.175 kb on + strand, within CSW01_18255 at 765.175 kb on + strand, within CSW01_18255 at 765.175 kb on + strand, within CSW01_18255 at 765.269 kb on + strand, within CSW01_18255
Per-strain Table
Position Strand Gene LocusTag Fraction LB_0.5%bileacids_Anaerobic_18HR_ZN21A remove 763,088 + CSW01_18245 0.46 +0.0 763,093 + CSW01_18245 0.47 +0.6 763,096 - CSW01_18245 0.47 +0.0 763,234 + CSW01_18245 0.57 -0.9 763,275 + CSW01_18245 0.60 -0.3 763,322 + CSW01_18245 0.63 +0.6 763,322 + CSW01_18245 0.63 +0.1 763,322 + CSW01_18245 0.63 -0.5 763,322 + CSW01_18245 0.63 +0.5 763,322 + CSW01_18245 0.63 +0.9 763,322 + CSW01_18245 0.63 -0.6 763,330 - CSW01_18245 0.64 +0.5 763,398 - CSW01_18245 0.69 -1.0 763,454 + CSW01_18245 0.73 +0.4 763,456 - CSW01_18245 0.73 -0.9 763,506 + CSW01_18245 0.77 +0.3 763,560 - CSW01_18245 0.81 -0.5 763,732 + -2.4 763,753 - -0.1 763,839 + -0.0 763,913 + +0.8 763,951 + -0.2 763,959 - -0.3 764,134 + CSW01_18250 0.44 -1.3 764,134 + CSW01_18250 0.44 +1.1 764,134 + CSW01_18250 0.44 -1.6 764,141 - CSW01_18250 0.47 -0.5 764,142 - CSW01_18250 0.47 -0.9 764,142 - CSW01_18250 0.47 +0.6 764,142 - CSW01_18250 0.47 -0.7 764,219 - CSW01_18250 0.74 -0.1 764,260 - CSW01_18250 0.88 +1.0 764,352 - +1.9 764,418 + -0.3 764,449 + -0.1 764,449 + -0.5 764,457 - -1.3 764,603 + CSW01_18255 0.18 +0.8 764,615 + CSW01_18255 0.18 -0.3 764,631 + CSW01_18255 0.19 +0.5 764,632 + CSW01_18255 0.19 +0.6 764,651 + CSW01_18255 0.21 -0.1 764,651 + CSW01_18255 0.21 -1.1 764,659 - CSW01_18255 0.21 +0.8 764,659 - CSW01_18255 0.21 -0.8 764,683 + CSW01_18255 0.23 -0.2 764,739 - CSW01_18255 0.26 -0.9 764,756 + CSW01_18255 0.27 +0.4 764,821 + CSW01_18255 0.31 +0.7 764,840 + CSW01_18255 0.32 +1.0 764,852 + CSW01_18255 0.33 +0.8 764,861 + CSW01_18255 0.34 -0.7 764,898 - CSW01_18255 0.36 -0.3 764,903 - CSW01_18255 0.36 +0.5 764,966 - CSW01_18255 0.40 -1.7 764,971 - CSW01_18255 0.41 +0.5 764,973 - CSW01_18255 0.41 -0.2 765,043 + CSW01_18255 0.45 -0.1 765,070 - CSW01_18255 0.47 +0.1 765,155 + CSW01_18255 0.52 -0.3 765,175 + CSW01_18255 0.53 +0.2 765,175 + CSW01_18255 0.53 +0.5 765,175 + CSW01_18255 0.53 -1.4 765,269 + CSW01_18255 0.59 -0.2
Or see this region's nucleotide sequence