Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2195

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,321,715	+				-0.9
2,321,736	+				-0.2
2,321,758	+				+0.0
2,321,868	+				-0.2
2,321,936	+		Dshi_2194	0.21	-0.7
2,321,936	+		Dshi_2194	0.21	-0.8
2,321,954	-		Dshi_2194	0.26	+0.4
2,321,959	-		Dshi_2194	0.27	+0.7
2,322,065	+		Dshi_2194	0.55	-0.1
2,322,197	+		Dshi_2194	0.89	-0.2
2,322,197	+		Dshi_2194	0.89	-0.3
2,322,231	+				-0.3
2,322,236	+				-0.4
2,322,239	-				+1.7
2,322,257	-				+1.7
2,322,267	+				+0.1
2,322,277	+				+0.1
2,322,301	+				-0.0
2,322,301	+				-0.1
2,322,309	-				+0.3
2,322,390	+				+0.0
2,322,429	-				+0.4
2,322,458	+				-0.2
2,322,494	-				+0.4
2,322,566	-		Dshi_2195	0.43	-0.5
2,322,635	-				-0.5
2,322,658	-				-0.7
2,322,670	-				-0.3
2,322,684	-				-0.2
2,322,723	+				-0.2
2,322,736	-				+0.5
2,322,751	+				+0.4
2,322,797	-				+0.1
2,322,802	-				-0.2
2,322,805	+				+0.8
2,322,805	+				+0.4
2,322,805	+				+1.0
2,322,805	+				-0.2
2,322,813	-				+0.4
2,322,813	-				-0.3
2,322,813	-				+0.4
2,322,813	-				-0.5
2,322,818	-				+0.7
2,322,850	-				-0.2
2,322,880	-				-0.0
2,322,907	-				+0.6
2,322,911	+				-0.0
2,322,919	-				-0.4
2,322,919	-				-0.8
2,322,923	+				+0.5
2,322,923	+				+0.7
2,322,923	+				-0.2
2,322,923	+				-0.7
2,322,923	+				+0.0
2,322,923	+				-0.6
2,322,931	-				+0.2
2,322,931	-				-1.5
2,322,931	-				-0.4
2,322,931	-				+0.2
2,322,931	-				-0.7
2,322,931	-				+1.4
2,322,931	-				-1.3
2,322,931	-				-0.2
2,322,931	-				-0.2
2,322,931	-				+1.3
2,322,931	-				+0.1
2,322,934	+				-0.6
2,322,942	-				-1.0
2,322,948	+				+1.0
2,322,951	+				+0.3
2,322,951	-				-0.2
2,322,951	-				+1.3
2,322,956	-				+0.8
2,322,961	+				-0.4
2,322,961	+				+0.1
2,322,962	+				-0.1
2,322,962	+				+0.3
2,322,970	+				-1.0
2,322,970	+				+0.1
2,322,988	+				+0.4
2,323,005	+				+0.5
2,323,005	+				-0.5
2,323,022	+				+0.1
2,323,022	+				+0.4
2,323,022	+				+0.5
2,323,022	+				-1.0
2,323,022	+				-0.7
2,323,022	+				-0.3
2,323,022	+				+0.4
2,323,025	-				+0.6
2,323,029	-				+0.4
2,323,030	-				-0.2
2,323,030	-				+0.3
2,323,030	-				+0.1
2,323,030	-				-0.0
2,323,030	-				-0.5
2,323,032	+				-0.5
2,323,032	+				+0.4
2,323,032	+				+0.8
2,323,032	+				+1.7
2,323,037	-				+0.2
2,323,054	+				+0.3
2,323,054	+				-1.0
2,323,054	+				+0.9
2,323,054	+				+0.1
2,323,056	-				-0.5
2,323,062	-				+0.5
2,323,066	-				+0.2
2,323,096	+				-1.0
2,323,138	+		Dshi_2196	0.13	-0.4
2,323,147	+		Dshi_2196	0.14	-0.1
2,323,147	+		Dshi_2196	0.14	+0.1
2,323,155	-		Dshi_2196	0.14	+0.5
2,323,155	-		Dshi_2196	0.14	+0.2
2,323,155	-		Dshi_2196	0.14	-0.7
2,323,155	-				+0.3
2,323,157	+		Dshi_2196	0.15	-0.1
2,323,157	+		Dshi_2196	0.15	+0.7
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	+0.4
2,323,157	+		Dshi_2196	0.15	-0.5
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	-0.7
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	-0.7
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	+0.1
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-0.1
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-0.4
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-0.3
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,165	-		Dshi_2196	0.15	+0.5
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	+0.4
2,323,165	-		Dshi_2196	0.15	+0.1
2,323,165	-		Dshi_2196	0.15	-0.5
2,323,165	-		Dshi_2196	0.15	-1.0
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	-0.7
2,323,165	-		Dshi_2196	0.15	-0.1
2,323,165	-		Dshi_2196	0.15	-0.2
2,323,165	-		Dshi_2196	0.15	+0.3
2,323,165	-		Dshi_2196	0.15	+0.6
2,323,165	-		Dshi_2196	0.15	-0.4
2,323,165	-		Dshi_2196	0.15	+0.8
2,323,165	-		Dshi_2196	0.15	-0.0
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	+2.1
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	-0.1
2,323,165	-		Dshi_2196	0.15	-2.0
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,165	-		Dshi_2196	0.15	-1.4
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,165	-		Dshi_2196	0.15	+0.4
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	-0.0
2,323,165	-		Dshi_2196	0.15	+1.0
2,323,165	-		Dshi_2196	0.15	-0.9
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,167	+		Dshi_2196	0.16	+0.4
2,323,175	-		Dshi_2196	0.16	-1.3
2,323,175	-		Dshi_2196	0.16	+0.2
2,323,175	-		Dshi_2196	0.16	-2.1
2,323,175	-		Dshi_2196	0.16	-0.1
2,323,175	-		Dshi_2196	0.16	+0.2
2,323,234	+				-0.2
2,323,270	+		Dshi_2196	0.26	+0.3
2,323,277	-		Dshi_2196	0.26	+1.6
2,323,312	+		Dshi_2196	0.30	-0.6
2,323,315	+		Dshi_2196	0.30	-0.9
2,323,325	+		Dshi_2196	0.31	+0.3
2,323,355	+		Dshi_2196	0.34	-1.2
2,323,364	+		Dshi_2196	0.35	+0.1
2,323,387	-		Dshi_2196	0.37	+0.3
2,323,394	-		Dshi_2196	0.38	-0.0
2,323,400	+		Dshi_2196	0.38	+0.2
2,323,400	+		Dshi_2196	0.38	-2.2
2,323,400	+		Dshi_2196	0.38	+1.3
2,323,406	-		Dshi_2196	0.39	-0.8
2,323,408	-		Dshi_2196	0.39	-0.1
2,323,409	+		Dshi_2196	0.39	+0.4
2,323,409	+		Dshi_2196	0.39	+0.0
2,323,409	+		Dshi_2196	0.39	+0.1
2,323,409	+		Dshi_2196	0.39	+0.8
2,323,409	+		Dshi_2196	0.39	+0.3
2,323,417	-		Dshi_2196	0.40	-1.2
2,323,477	+		Dshi_2196	0.46	-0.4
2,323,487	+		Dshi_2196	0.47	+0.6
2,323,492	+		Dshi_2196	0.47	+0.6
2,323,495	-		Dshi_2196	0.48	+0.1
2,323,495	-		Dshi_2196	0.48	+0.4
2,323,497	+		Dshi_2196	0.48	-0.5
2,323,500	-		Dshi_2196	0.48	-0.8
2,323,501	+		Dshi_2196	0.48	-0.4
2,323,501	+		Dshi_2196	0.48	-0.2
2,323,502	+		Dshi_2196	0.48	+0.3
2,323,502	+		Dshi_2196	0.48	+0.1
2,323,502	+		Dshi_2196	0.48	-0.2
2,323,502	+		Dshi_2196	0.48	+0.1
2,323,502	+		Dshi_2196	0.48	+0.5
2,323,502	+		Dshi_2196	0.48	-0.1
2,323,502	+		Dshi_2196	0.48	-0.9
2,323,502	+		Dshi_2196	0.48	+0.1
2,323,502	+		Dshi_2196	0.48	+0.1
2,323,505	-		Dshi_2196	0.49	-1.4
2,323,506	+		Dshi_2196	0.49	-0.2
2,323,506	+		Dshi_2196	0.49	-0.4
2,323,506	+		Dshi_2196	0.49	+0.2
2,323,506	+		Dshi_2196	0.49	-0.1
2,323,506	+		Dshi_2196	0.49	+0.8
2,323,507	+		Dshi_2196	0.49	-0.2
2,323,507	+		Dshi_2196	0.49	-0.3
2,323,507	+		Dshi_2196	0.49	-0.3
2,323,509	-		Dshi_2196	0.49	-0.4
2,323,509	-		Dshi_2196	0.49	-0.3
2,323,510	-		Dshi_2196	0.49	+0.4
2,323,510	-		Dshi_2196	0.49	+1.1
2,323,510	-		Dshi_2196	0.49	+0.8
2,323,514	+		Dshi_2196	0.50	+0.4
2,323,514	-		Dshi_2196	0.50	-1.2
2,323,514	-		Dshi_2196	0.50	-0.3
2,323,515	-		Dshi_2196	0.50	+0.1
2,323,515	-		Dshi_2196	0.50	-0.7
2,323,520	-		Dshi_2196	0.50	+0.4
2,323,524	-		Dshi_2196	0.51	+0.3
2,323,536	-		Dshi_2196	0.52	-0.4
2,323,537	-		Dshi_2196	0.52	+0.7
2,323,542	-		Dshi_2196	0.52	+0.1
2,323,542	-		Dshi_2196	0.52	+0.4
2,323,545	-		Dshi_2196	0.53	+0.1
2,323,545	-		Dshi_2196	0.53	+1.2
2,323,545	-		Dshi_2196	0.53	-0.2
2,323,545	-		Dshi_2196	0.53	-0.0
2,323,546	-		Dshi_2196	0.53	-0.1
2,323,547	+		Dshi_2196	0.53	+0.3
2,323,555	-		Dshi_2196	0.54	-0.3
2,323,555	-		Dshi_2196	0.54	+0.1
2,323,555	-		Dshi_2196	0.54	+0.0
2,323,565	-		Dshi_2196	0.55	+0.0
2,323,592	-		Dshi_2196	0.57	-0.3
2,323,596	+		Dshi_2196	0.58	-1.2
2,323,614	-		Dshi_2196	0.59	+0.0
2,323,614	-		Dshi_2196	0.59	+0.1
2,323,621	+		Dshi_2196	0.60	+0.8
2,323,635	+		Dshi_2196	0.61	+0.0
2,323,640	+		Dshi_2196	0.62	-0.2