Experiment: Vanillyl Alcohol 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6093 and Pf6N2E2_6094 are separated by 174 nucleotides
Pf6N2E2_6093 - hypothetical protein, at 6,916,870 to 6,917,235
_6093
Pf6N2E2_6094 - Glucoamylase (EC 3.2.1.3), at 6,917,410 to 6,918,999
_6094
Position (kb)
6917
6918
6919 Strain fitness (log2 ratio)
-1
0
1
2 at 6916.466 kb on + strand at 6916.477 kb on - strand at 6916.523 kb on + strand at 6916.523 kb on + strand at 6916.524 kb on - strand at 6916.524 kb on - strand at 6916.542 kb on + strand at 6916.573 kb on + strand at 6916.694 kb on + strand at 6916.694 kb on + strand at 6916.694 kb on + strand at 6916.733 kb on + strand at 6916.734 kb on - strand at 6916.802 kb on + strand at 6916.802 kb on + strand at 6916.803 kb on - strand at 6916.867 kb on - strand at 6916.867 kb on - strand at 6916.918 kb on + strand, within Pf6N2E2_6093 at 6916.918 kb on + strand, within Pf6N2E2_6093 at 6916.919 kb on - strand, within Pf6N2E2_6093 at 6916.919 kb on - strand, within Pf6N2E2_6093 at 6917.221 kb on + strand at 6917.544 kb on - strand at 6917.897 kb on + strand, within Pf6N2E2_6094 at 6917.898 kb on - strand, within Pf6N2E2_6094 at 6917.898 kb on - strand, within Pf6N2E2_6094 at 6917.898 kb on - strand, within Pf6N2E2_6094 at 6918.042 kb on + strand, within Pf6N2E2_6094 at 6918.132 kb on - strand, within Pf6N2E2_6094 at 6918.146 kb on + strand, within Pf6N2E2_6094 at 6918.356 kb on + strand, within Pf6N2E2_6094 at 6918.356 kb on + strand, within Pf6N2E2_6094 at 6918.398 kb on + strand, within Pf6N2E2_6094 at 6918.437 kb on + strand, within Pf6N2E2_6094 at 6918.575 kb on + strand, within Pf6N2E2_6094 at 6918.760 kb on + strand, within Pf6N2E2_6094 at 6918.760 kb on + strand, within Pf6N2E2_6094 at 6918.760 kb on + strand, within Pf6N2E2_6094 at 6918.840 kb on - strand, within Pf6N2E2_6094 at 6918.840 kb on - strand, within Pf6N2E2_6094 at 6918.917 kb on - strand at 6918.917 kb on - strand at 6919.016 kb on + strand at 6919.016 kb on + strand at 6919.016 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vanillyl Alcohol 0.005 M remove 6,916,466 + +0.7 6,916,477 - +1.0 6,916,523 + +0.1 6,916,523 + +0.7 6,916,524 - -1.5 6,916,524 - +0.4 6,916,542 + -1.2 6,916,573 + -0.5 6,916,694 + -0.4 6,916,694 + +1.0 6,916,694 + -0.6 6,916,733 + -0.2 6,916,734 - -0.8 6,916,802 + +0.4 6,916,802 + +0.6 6,916,803 - -0.9 6,916,867 - +0.6 6,916,867 - +0.4 6,916,918 + Pf6N2E2_6093 0.13 -1.2 6,916,918 + Pf6N2E2_6093 0.13 -0.2 6,916,919 - Pf6N2E2_6093 0.13 -0.2 6,916,919 - Pf6N2E2_6093 0.13 +0.2 6,917,221 + -0.6 6,917,544 - -1.2 6,917,897 + Pf6N2E2_6094 0.31 +1.6 6,917,898 - Pf6N2E2_6094 0.31 -0.6 6,917,898 - Pf6N2E2_6094 0.31 -0.1 6,917,898 - Pf6N2E2_6094 0.31 +1.3 6,918,042 + Pf6N2E2_6094 0.40 +0.2 6,918,132 - Pf6N2E2_6094 0.45 +1.3 6,918,146 + Pf6N2E2_6094 0.46 +0.0 6,918,356 + Pf6N2E2_6094 0.59 +0.7 6,918,356 + Pf6N2E2_6094 0.59 +0.2 6,918,398 + Pf6N2E2_6094 0.62 -0.2 6,918,437 + Pf6N2E2_6094 0.65 +0.5 6,918,575 + Pf6N2E2_6094 0.73 +0.8 6,918,760 + Pf6N2E2_6094 0.85 +0.9 6,918,760 + Pf6N2E2_6094 0.85 -0.2 6,918,760 + Pf6N2E2_6094 0.85 +0.9 6,918,840 - Pf6N2E2_6094 0.90 +1.0 6,918,840 - Pf6N2E2_6094 0.90 +0.8 6,918,917 - +2.6 6,918,917 - +0.5 6,919,016 + -0.3 6,919,016 + -1.1 6,919,016 + -0.4
Or see this region's nucleotide sequence