Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5485

Experiment: Vanillyl Alcohol 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillyl Alcohol 0.005 M
6,301,194	+				-2.1
6,301,194	+				-0.3
6,301,194	+				+0.5
6,301,195	-				-0.6
6,301,195	-				-1.3
6,301,242	+				-0.2
6,301,293	+		Pf6N2E2_5484	0.16	+0.2
6,301,293	+		Pf6N2E2_5484	0.16	+0.6
6,301,294	-		Pf6N2E2_5484	0.16	-0.2
6,301,325	-		Pf6N2E2_5484	0.21	-1.0
6,301,396	+		Pf6N2E2_5484	0.33	+0.2
6,301,397	-		Pf6N2E2_5484	0.33	+0.2
6,301,650	+		Pf6N2E2_5484	0.74	+0.1
6,301,650	+		Pf6N2E2_5484	0.74	+0.2
6,301,651	-		Pf6N2E2_5484	0.74	+0.4
6,301,651	-		Pf6N2E2_5484	0.74	-1.1
6,301,651	-		Pf6N2E2_5484	0.74	-0.0
6,301,651	-		Pf6N2E2_5484	0.74	-0.2
6,301,651	-		Pf6N2E2_5484	0.74	-0.2
6,301,651	-		Pf6N2E2_5484	0.74	-0.1
6,301,674	+		Pf6N2E2_5484	0.77	+0.3
6,301,791	+				+0.5
6,301,791	+				+0.3
6,301,791	+				+0.4
6,301,792	-				-1.5
6,301,792	-				-1.1
6,301,792	-				-0.3
6,301,792	-				-0.8
6,301,858	+				+0.9
6,301,859	-				-1.2
6,301,859	-				+1.0
6,301,936	+				-0.8
6,301,936	+				+1.3
6,301,936	+				-1.5
6,301,936	+				-0.2
6,301,937	-				-0.3
6,301,937	-				-0.1
6,301,937	-				+1.2
6,301,940	+				-0.0
6,301,940	+				+1.0
6,301,940	+				-0.3
6,301,940	+				-0.8
6,301,940	+				-1.5
6,301,940	+				-0.1
6,301,940	+				-0.2
6,301,940	+				-1.3
6,301,940	+				-0.0
6,301,940	+				-0.5
6,301,940	+				+0.3
6,301,940	+				+1.3
6,301,940	+				+0.6
6,301,940	+				-0.1
6,301,940	+				-0.3
6,301,940	+				+1.2
6,301,940	+				-0.1
6,301,940	+				-0.3
6,301,940	+				+0.7
6,301,940	+				-0.8
6,301,940	+				+0.5
6,301,940	+				-3.1
6,301,940	+				-0.6
6,301,940	+				+1.1
6,301,940	+				-0.1
6,301,941	-				-0.6
6,301,941	-				+0.3
6,301,941	-				-1.1
6,301,941	-				+1.2
6,301,941	-				-0.8
6,301,941	-				-0.6
6,301,941	-				+0.7
6,301,941	-				-1.2
6,301,941	-				+0.7
6,301,941	-				-0.6
6,301,956	+				-0.3
6,301,956	+				-0.7
6,301,956	+				+0.8
6,301,956	+				+0.7
6,301,956	+				+0.7
6,301,956	+				+1.2
6,301,957	-				-0.5
6,301,957	-				+0.2
6,301,957	-				-0.7
6,301,957	-				-0.9
6,301,957	-				-0.2
6,302,046	+				-0.2
6,302,046	+				-1.2
6,302,046	+				-0.5
6,302,046	+				-0.2
6,302,046	+				+0.1
6,302,046	+				+0.2
6,302,046	+				-0.6
6,302,046	+				+1.0
6,302,046	+				-0.1
6,302,046	+				+0.4
6,302,047	-				-0.1
6,302,047	-				+0.9
6,302,050	+				-0.1
6,302,050	+				+0.3
6,302,050	+				+1.2
6,302,050	+				+0.7
6,302,051	-				-0.5
6,302,051	-				+0.2
6,302,051	-				+0.2
6,302,051	-				-0.8
6,302,051	-				+0.8
6,302,093	+				-2.3
6,302,094	-				+0.9
6,302,113	-				+1.0
6,302,152	-		Pf6N2E2_5485	0.12	+1.2
6,302,152	-		Pf6N2E2_5485	0.12	-0.7
6,302,425	-		Pf6N2E2_5485	0.68	-1.7
6,302,435	+		Pf6N2E2_5485	0.70	-0.1
6,302,436	-		Pf6N2E2_5485	0.70	-0.2
6,302,436	-		Pf6N2E2_5485	0.70	-0.2
6,302,436	-		Pf6N2E2_5485	0.70	-0.3
6,302,474	+		Pf6N2E2_5485	0.78	-2.1
6,302,474	+		Pf6N2E2_5485	0.78	-1.5
6,302,475	-		Pf6N2E2_5485	0.78	+0.2
6,302,737	+				-0.9
6,302,737	+				+0.7
6,302,737	+				+0.8
6,302,793	+				+0.2
6,302,793	+				-1.2
6,302,794	-				+0.8
6,302,928	+				-1.1
6,302,928	+				-0.9
6,302,928	+				-1.1
6,302,928	+				-0.0
6,302,928	+				+1.4
6,302,929	-				-0.3
6,302,929	-				-1.1
6,302,929	-				-0.6
6,302,929	-				+0.3
6,302,929	-				+0.6
6,302,929	-				-0.6
6,302,964	+				-0.3
6,302,965	-				+0.4
6,302,970	+				-0.3
6,302,970	+				-0.2
6,302,970	+				-0.7
6,302,971	-				+0.7
6,302,971	-				+0.1
6,302,971	-				-1.7
6,302,971	-				+2.5
6,302,971	-				+0.6
6,303,005	+				-0.6
6,303,005	+				+0.2
6,303,015	+		Pf6N2E2_5486	0.10	-1.8
6,303,015	+		Pf6N2E2_5486	0.10	-0.0
6,303,015	+		Pf6N2E2_5486	0.10	-0.1
6,303,015	+		Pf6N2E2_5486	0.10	+1.9
6,303,016	-		Pf6N2E2_5486	0.10	+1.0
6,303,016	-		Pf6N2E2_5486	0.10	-1.0
6,303,016	-		Pf6N2E2_5486	0.10	-0.6
6,303,016	-		Pf6N2E2_5486	0.10	-0.1
6,303,016	-		Pf6N2E2_5486	0.10	+1.2
6,303,016	-		Pf6N2E2_5486	0.10	-0.2
6,303,129	+		Pf6N2E2_5486	0.19	-0.7
6,303,393	+		Pf6N2E2_5486	0.39	-0.6
6,303,393	+		Pf6N2E2_5486	0.39	-0.7
6,303,393	+		Pf6N2E2_5486	0.39	-0.0
6,303,393	+		Pf6N2E2_5486	0.39	-0.3
6,303,393	+		Pf6N2E2_5486	0.39	+0.3
6,303,393	+		Pf6N2E2_5486	0.39	+0.5
6,303,393	+		Pf6N2E2_5486	0.39	+1.0
6,303,393	+		Pf6N2E2_5486	0.39	-0.1
6,303,393	+		Pf6N2E2_5486	0.39	+1.4
6,303,393	+		Pf6N2E2_5486	0.39	-0.4
6,303,393	+		Pf6N2E2_5486	0.39	+0.2
6,303,394	-		Pf6N2E2_5486	0.39	+0.5
6,303,394	-		Pf6N2E2_5486	0.39	+0.3
6,303,394	-		Pf6N2E2_5486	0.39	-1.6
6,303,394	-		Pf6N2E2_5486	0.39	+0.1
6,303,394	-		Pf6N2E2_5486	0.39	+1.4
6,303,394	-		Pf6N2E2_5486	0.39	+0.6
6,303,402	+		Pf6N2E2_5486	0.40	+0.5
6,303,402	+		Pf6N2E2_5486	0.40	-0.8
6,303,402	+		Pf6N2E2_5486	0.40	-0.2
6,303,402	+		Pf6N2E2_5486	0.40	-1.9
6,303,402	+		Pf6N2E2_5486	0.40	-0.3
6,303,403	-		Pf6N2E2_5486	0.40	-0.2
6,303,403	-		Pf6N2E2_5486	0.40	+0.3
6,303,403	-		Pf6N2E2_5486	0.40	-0.3
6,303,403	-		Pf6N2E2_5486	0.40	-1.1
6,303,403	-		Pf6N2E2_5486	0.40	+1.0
6,303,403	-		Pf6N2E2_5486	0.40	+0.2
6,303,403	-		Pf6N2E2_5486	0.40	+1.4
6,303,403	-		Pf6N2E2_5486	0.40	+0.1
6,303,408	+		Pf6N2E2_5486	0.40	+0.5
6,303,408	+		Pf6N2E2_5486	0.40	-0.7
6,303,409	-		Pf6N2E2_5486	0.40	-1.0
6,303,409	-		Pf6N2E2_5486	0.40	-1.0
6,303,409	-		Pf6N2E2_5486	0.40	-0.2
6,303,409	-		Pf6N2E2_5486	0.40	-2.1
6,303,549	+		Pf6N2E2_5486	0.51	+0.3