Experiment: Vanillyl Alcohol 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4312 and Pf6N2E2_4313 are separated by 209 nucleotides Pf6N2E2_4313 and Pf6N2E2_4314 are separated by 546 nucleotides
Pf6N2E2_4312 - Serine/threonine protein kinase (EC 2.7.11.1), at 5,029,914 to 5,030,846
_4312
Pf6N2E2_4313 - hypothetical protein, at 5,031,056 to 5,031,415
_4313
Pf6N2E2_4314 - hypothetical protein, at 5,031,962 to 5,032,627
_4314
Position (kb) 5031
5032 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5030.118 kb on + strand, within Pf6N2E2_4312 at 5030.119 kb on - strand, within Pf6N2E2_4312 at 5030.223 kb on - strand, within Pf6N2E2_4312 at 5030.235 kb on + strand, within Pf6N2E2_4312 at 5030.235 kb on + strand, within Pf6N2E2_4312 at 5030.236 kb on - strand, within Pf6N2E2_4312 at 5030.391 kb on + strand, within Pf6N2E2_4312 at 5030.392 kb on - strand, within Pf6N2E2_4312 at 5030.410 kb on + strand, within Pf6N2E2_4312 at 5030.410 kb on + strand, within Pf6N2E2_4312 at 5030.410 kb on + strand, within Pf6N2E2_4312 at 5030.614 kb on - strand, within Pf6N2E2_4312 at 5030.614 kb on - strand, within Pf6N2E2_4312 at 5030.634 kb on + strand, within Pf6N2E2_4312 at 5030.634 kb on + strand, within Pf6N2E2_4312 at 5030.634 kb on + strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.671 kb on + strand, within Pf6N2E2_4312 at 5030.793 kb on - strand at 5030.883 kb on + strand at 5030.883 kb on + strand at 5030.884 kb on - strand at 5030.884 kb on - strand at 5030.884 kb on - strand at 5030.974 kb on + strand at 5030.974 kb on + strand at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.312 kb on + strand, within Pf6N2E2_4313 at 5031.312 kb on + strand, within Pf6N2E2_4313 at 5031.403 kb on + strand at 5031.404 kb on - strand at 5031.479 kb on + strand at 5031.480 kb on - strand at 5031.480 kb on - strand at 5031.548 kb on + strand at 5031.548 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.586 kb on - strand at 5031.660 kb on + strand at 5031.702 kb on + strand at 5031.708 kb on + strand at 5031.708 kb on + strand at 5031.730 kb on + strand at 5031.730 kb on + strand at 5031.730 kb on + strand at 5031.730 kb on + strand at 5031.731 kb on - strand at 5031.731 kb on - strand at 5031.731 kb on - strand at 5031.775 kb on - strand at 5031.775 kb on - strand at 5031.940 kb on + strand at 5031.980 kb on - strand at 5031.996 kb on + strand at 5031.996 kb on + strand at 5031.996 kb on + strand at 5031.997 kb on - strand at 5031.997 kb on - strand at 5031.997 kb on - strand at 5031.997 kb on - strand at 5031.997 kb on - strand at 5032.076 kb on + strand, within Pf6N2E2_4314 at 5032.077 kb on - strand, within Pf6N2E2_4314 at 5032.077 kb on - strand, within Pf6N2E2_4314 at 5032.077 kb on - strand, within Pf6N2E2_4314 at 5032.142 kb on - strand, within Pf6N2E2_4314 at 5032.169 kb on + strand, within Pf6N2E2_4314 at 5032.194 kb on + strand, within Pf6N2E2_4314 at 5032.194 kb on + strand, within Pf6N2E2_4314 at 5032.195 kb on - strand, within Pf6N2E2_4314 at 5032.240 kb on + strand, within Pf6N2E2_4314 at 5032.240 kb on + strand, within Pf6N2E2_4314 at 5032.241 kb on - strand, within Pf6N2E2_4314 at 5032.241 kb on - strand, within Pf6N2E2_4314 at 5032.241 kb on - strand, within Pf6N2E2_4314 at 5032.241 kb on - strand, within Pf6N2E2_4314 at 5032.242 kb on + strand, within Pf6N2E2_4314 at 5032.243 kb on - strand, within Pf6N2E2_4314 at 5032.384 kb on - strand, within Pf6N2E2_4314
Per-strain Table
Position Strand Gene LocusTag Fraction Vanillyl Alcohol 0.005 M remove 5,030,118 + Pf6N2E2_4312 0.22 +0.2 5,030,119 - Pf6N2E2_4312 0.22 -0.2 5,030,223 - Pf6N2E2_4312 0.33 -0.0 5,030,235 + Pf6N2E2_4312 0.34 -0.9 5,030,235 + Pf6N2E2_4312 0.34 -1.3 5,030,236 - Pf6N2E2_4312 0.35 +2.8 5,030,391 + Pf6N2E2_4312 0.51 -0.5 5,030,392 - Pf6N2E2_4312 0.51 +0.2 5,030,410 + Pf6N2E2_4312 0.53 +0.0 5,030,410 + Pf6N2E2_4312 0.53 -0.0 5,030,410 + Pf6N2E2_4312 0.53 -0.4 5,030,614 - Pf6N2E2_4312 0.75 +0.1 5,030,614 - Pf6N2E2_4312 0.75 +0.8 5,030,634 + Pf6N2E2_4312 0.77 +0.8 5,030,634 + Pf6N2E2_4312 0.77 +1.5 5,030,634 + Pf6N2E2_4312 0.77 +0.3 5,030,635 - Pf6N2E2_4312 0.77 +1.3 5,030,635 - Pf6N2E2_4312 0.77 -1.0 5,030,635 - Pf6N2E2_4312 0.77 -0.1 5,030,635 - Pf6N2E2_4312 0.77 -1.1 5,030,671 + Pf6N2E2_4312 0.81 +0.1 5,030,793 - -0.4 5,030,883 + -1.1 5,030,883 + +0.2 5,030,884 - -0.1 5,030,884 - -0.2 5,030,884 - +0.6 5,030,974 + -0.2 5,030,974 + -1.2 5,031,309 + Pf6N2E2_4313 0.70 -0.2 5,031,309 + Pf6N2E2_4313 0.70 +0.7 5,031,309 + Pf6N2E2_4313 0.70 +0.7 5,031,309 + Pf6N2E2_4313 0.70 +0.4 5,031,309 + Pf6N2E2_4313 0.70 +1.4 5,031,309 + Pf6N2E2_4313 0.70 +1.0 5,031,309 + Pf6N2E2_4313 0.70 +0.2 5,031,309 + Pf6N2E2_4313 0.70 +0.2 5,031,309 + Pf6N2E2_4313 0.70 +0.3 5,031,309 + Pf6N2E2_4313 0.70 +0.4 5,031,309 + Pf6N2E2_4313 0.70 +0.6 5,031,310 - Pf6N2E2_4313 0.71 +0.5 5,031,310 - Pf6N2E2_4313 0.71 +1.2 5,031,310 - Pf6N2E2_4313 0.71 -0.1 5,031,310 - Pf6N2E2_4313 0.71 +0.4 5,031,310 - Pf6N2E2_4313 0.71 +1.0 5,031,310 - Pf6N2E2_4313 0.71 -2.1 5,031,310 - Pf6N2E2_4313 0.71 +0.9 5,031,310 - Pf6N2E2_4313 0.71 -2.8 5,031,312 + Pf6N2E2_4313 0.71 +0.8 5,031,312 + Pf6N2E2_4313 0.71 +1.6 5,031,403 + +0.2 5,031,404 - +0.0 5,031,479 + -0.0 5,031,480 - +0.2 5,031,480 - +0.9 5,031,548 + -0.1 5,031,548 + -0.5 5,031,553 + -2.6 5,031,553 + -0.0 5,031,553 + -0.8 5,031,553 + +0.7 5,031,553 + -1.4 5,031,553 + +0.8 5,031,553 + +0.2 5,031,553 + +0.2 5,031,553 + -0.1 5,031,554 - +1.4 5,031,554 - -2.4 5,031,554 - +1.1 5,031,554 - -1.1 5,031,554 - +0.5 5,031,554 - -1.3 5,031,554 - -0.4 5,031,554 - -0.2 5,031,554 - +0.7 5,031,554 - +1.2 5,031,585 + +0.5 5,031,585 + +0.8 5,031,585 + -0.4 5,031,585 + +1.2 5,031,585 + -0.2 5,031,585 + +0.6 5,031,585 + +0.4 5,031,585 + +0.9 5,031,586 - -0.6 5,031,660 + +1.1 5,031,702 + +1.0 5,031,708 + +0.9 5,031,708 + -0.3 5,031,730 + +0.8 5,031,730 + +1.0 5,031,730 + -1.7 5,031,730 + -0.2 5,031,731 - -0.5 5,031,731 - +0.8 5,031,731 - -1.2 5,031,775 - +0.9 5,031,775 - -0.1 5,031,940 + +0.9 5,031,980 - +0.1 5,031,996 + +0.4 5,031,996 + +1.2 5,031,996 + +0.1 5,031,997 - +0.4 5,031,997 - +0.6 5,031,997 - +0.5 5,031,997 - -0.2 5,031,997 - -0.9 5,032,076 + Pf6N2E2_4314 0.17 +0.1 5,032,077 - Pf6N2E2_4314 0.17 -0.1 5,032,077 - Pf6N2E2_4314 0.17 +0.3 5,032,077 - Pf6N2E2_4314 0.17 +0.0 5,032,142 - Pf6N2E2_4314 0.27 -0.7 5,032,169 + Pf6N2E2_4314 0.31 -1.1 5,032,194 + Pf6N2E2_4314 0.35 -0.3 5,032,194 + Pf6N2E2_4314 0.35 +0.9 5,032,195 - Pf6N2E2_4314 0.35 -2.2 5,032,240 + Pf6N2E2_4314 0.42 +1.0 5,032,240 + Pf6N2E2_4314 0.42 +1.4 5,032,241 - Pf6N2E2_4314 0.42 -0.5 5,032,241 - Pf6N2E2_4314 0.42 -0.2 5,032,241 - Pf6N2E2_4314 0.42 +0.3 5,032,241 - Pf6N2E2_4314 0.42 -0.0 5,032,242 + Pf6N2E2_4314 0.42 +0.1 5,032,243 - Pf6N2E2_4314 0.42 +0.6 5,032,384 - Pf6N2E2_4314 0.63 +0.4
Or see this region's nucleotide sequence