Experiment: Vanillyl Alcohol 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1 and Pf6N2E2_2 are separated by 145 nucleotides
Pf6N2E2_1 - Trans-aconitate 2-methyltransferase (EC 2.1.1.144), at 90 to 860
_1
Pf6N2E2_2 - FIG057993:Thioesterase involved in non-ribosomal peptide biosynthesis, at 1,006 to 1,740
_2
Position (kb) 0
1 Strain fitness (log2 ratio) -1
0
1 at 0.027 kb on + strand at 0.028 kb on - strand at 0.035 kb on - strand at 0.035 kb on - strand at 0.158 kb on - strand at 0.181 kb on + strand, within Pf6N2E2_1 at 0.182 kb on - strand, within Pf6N2E2_1 at 0.193 kb on + strand, within Pf6N2E2_1 at 0.298 kb on + strand, within Pf6N2E2_1 at 0.349 kb on + strand, within Pf6N2E2_1 at 0.353 kb on - strand, within Pf6N2E2_1 at 0.353 kb on - strand, within Pf6N2E2_1 at 0.369 kb on + strand, within Pf6N2E2_1 at 0.370 kb on - strand, within Pf6N2E2_1 at 0.370 kb on - strand, within Pf6N2E2_1 at 0.838 kb on + strand at 0.839 kb on - strand at 0.839 kb on - strand at 0.839 kb on - strand at 0.902 kb on + strand at 0.902 kb on + strand at 0.902 kb on + strand at 0.903 kb on - strand at 0.904 kb on + strand at 0.904 kb on + strand at 0.904 kb on + strand at 0.904 kb on + strand at 0.905 kb on - strand at 0.905 kb on - strand at 0.948 kb on - strand at 0.955 kb on + strand at 0.955 kb on + strand at 1.037 kb on - strand at 1.060 kb on + strand at 1.060 kb on + strand at 1.060 kb on + strand at 1.061 kb on - strand at 1.349 kb on - strand, within Pf6N2E2_2 at 1.430 kb on + strand, within Pf6N2E2_2 at 1.431 kb on - strand, within Pf6N2E2_2 at 1.431 kb on - strand, within Pf6N2E2_2 at 1.431 kb on - strand, within Pf6N2E2_2
Per-strain Table
Position Strand Gene LocusTag Fraction Vanillyl Alcohol 0.005 M remove 27 + -0.4 28 - -0.4 35 - +0.5 35 - -1.4 158 - +0.2 181 + Pf6N2E2_1 0.12 -0.9 182 - Pf6N2E2_1 0.12 +0.2 193 + Pf6N2E2_1 0.13 -0.4 298 + Pf6N2E2_1 0.27 -1.0 349 + Pf6N2E2_1 0.34 -1.7 353 - Pf6N2E2_1 0.34 -0.8 353 - Pf6N2E2_1 0.34 -0.4 369 + Pf6N2E2_1 0.36 -0.9 370 - Pf6N2E2_1 0.36 -0.6 370 - Pf6N2E2_1 0.36 -0.2 838 + -0.1 839 - +0.7 839 - -0.8 839 - -0.2 902 + +0.3 902 + +0.2 902 + +0.6 903 - +0.7 904 + -0.4 904 + +1.0 904 + -0.7 904 + -0.6 905 - +0.6 905 - -0.5 948 - -0.3 955 + +0.5 955 + -1.6 1,037 - +0.4 1,060 + +0.1 1,060 + -0.2 1,060 + -0.7 1,061 - +0.5 1,349 - Pf6N2E2_2 0.47 +0.1 1,430 + Pf6N2E2_2 0.58 -0.0 1,431 - Pf6N2E2_2 0.58 -0.4 1,431 - Pf6N2E2_2 0.58 +1.4 1,431 - Pf6N2E2_2 0.58 +0.8
Or see this region's nucleotide sequence