Experiment: Growth at 10C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS20660 and PFLU_RS20665 are separated by 306 nucleotides PFLU_RS20665 and PFLU_RS20670 are separated by 17 nucleotides PFLU_RS20670 and PFLU_RS20675 are separated by 103 nucleotides
PFLU_RS20660: PFLU_RS20660 - aspartate/tyrosine/aromatic aminotransferase, at 4,653,397 to 4,654,593
_RS20660
PFLU_RS20665: PFLU_RS20665 - hypothetical protein, at 4,654,900 to 4,655,109
_RS20665
PFLU_RS20670: PFLU_RS20670 - LysR family transcriptional regulator, at 4,655,127 to 4,655,999
_RS20670
PFLU_RS20675: PFLU_RS20675 - aldehyde dehydrogenase family protein, at 4,656,103 to 4,657,494
_RS20675
Position (kb) 4655
4656 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.249 kb on + strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.250 kb on - strand, within PFLU_RS20660 at 4654.451 kb on - strand, within PFLU_RS20660 at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.504 kb on + strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.505 kb on - strand at 4654.524 kb on + strand at 4654.524 kb on + strand at 4654.524 kb on + strand at 4654.524 kb on + strand at 4654.524 kb on + strand at 4654.525 kb on - strand at 4654.525 kb on - strand at 4654.525 kb on - strand at 4654.525 kb on - strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.591 kb on + strand at 4654.592 kb on - strand at 4654.592 kb on - strand at 4654.592 kb on - strand at 4654.899 kb on + strand at 4654.899 kb on + strand at 4654.899 kb on + strand at 4654.899 kb on + strand at 4654.900 kb on - strand at 4654.900 kb on - strand at 4655.110 kb on + strand at 4655.110 kb on + strand at 4655.111 kb on - strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.122 kb on + strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.123 kb on - strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.128 kb on + strand at 4655.129 kb on - strand at 4655.129 kb on - strand at 4655.129 kb on - strand at 4655.129 kb on - strand at 4655.163 kb on + strand at 4655.216 kb on + strand, within PFLU_RS20670 at 4655.216 kb on + strand, within PFLU_RS20670 at 4655.216 kb on + strand, within PFLU_RS20670 at 4655.216 kb on + strand, within PFLU_RS20670 at 4655.217 kb on - strand, within PFLU_RS20670 at 4655.217 kb on - strand, within PFLU_RS20670 at 4655.217 kb on - strand, within PFLU_RS20670 at 4655.217 kb on - strand, within PFLU_RS20670 at 4655.217 kb on - strand, within PFLU_RS20670 at 4655.264 kb on + strand, within PFLU_RS20670 at 4655.347 kb on + strand, within PFLU_RS20670 at 4655.348 kb on - strand, within PFLU_RS20670 at 4655.348 kb on - strand, within PFLU_RS20670 at 4655.348 kb on - strand, within PFLU_RS20670 at 4655.348 kb on - strand, within PFLU_RS20670 at 4655.419 kb on + strand, within PFLU_RS20670 at 4655.443 kb on + strand, within PFLU_RS20670 at 4655.443 kb on + strand, within PFLU_RS20670 at 4655.443 kb on + strand, within PFLU_RS20670 at 4655.443 kb on + strand, within PFLU_RS20670 at 4655.443 kb on + strand, within PFLU_RS20670 at 4655.443 kb on + strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.444 kb on - strand, within PFLU_RS20670 at 4655.666 kb on + strand, within PFLU_RS20670 at 4655.668 kb on + strand, within PFLU_RS20670 at 4655.668 kb on + strand, within PFLU_RS20670 at 4655.668 kb on + strand, within PFLU_RS20670 at 4655.668 kb on + strand, within PFLU_RS20670 at 4655.669 kb on - strand, within PFLU_RS20670 at 4655.669 kb on - strand, within PFLU_RS20670 at 4655.669 kb on - strand, within PFLU_RS20670 at 4655.669 kb on - strand, within PFLU_RS20670 at 4655.669 kb on - strand, within PFLU_RS20670 at 4655.669 kb on - strand, within PFLU_RS20670 at 4655.690 kb on + strand, within PFLU_RS20670 at 4655.798 kb on + strand, within PFLU_RS20670 at 4655.798 kb on + strand, within PFLU_RS20670 at 4655.799 kb on - strand, within PFLU_RS20670 at 4655.799 kb on - strand, within PFLU_RS20670 at 4655.800 kb on + strand, within PFLU_RS20670 at 4655.801 kb on - strand, within PFLU_RS20670 at 4656.064 kb on + strand at 4656.071 kb on - strand at 4656.111 kb on + strand at 4656.111 kb on + strand at 4656.111 kb on + strand at 4656.112 kb on - strand at 4656.112 kb on - strand at 4656.112 kb on - strand at 4656.172 kb on + strand at 4656.172 kb on + strand at 4656.173 kb on - strand at 4656.173 kb on - strand at 4656.178 kb on + strand at 4656.403 kb on + strand, within PFLU_RS20675 at 4656.404 kb on - strand, within PFLU_RS20675 at 4656.404 kb on - strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.574 kb on + strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.575 kb on - strand, within PFLU_RS20675 at 4656.614 kb on - strand, within PFLU_RS20675 at 4656.717 kb on + strand, within PFLU_RS20675 at 4656.717 kb on + strand, within PFLU_RS20675 at 4656.717 kb on + strand, within PFLU_RS20675 at 4656.718 kb on - strand, within PFLU_RS20675 at 4656.718 kb on - strand, within PFLU_RS20675 at 4656.947 kb on + strand, within PFLU_RS20675 at 4656.947 kb on + strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675 at 4656.948 kb on - strand, within PFLU_RS20675
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 10C remove 4,654,249 + PFLU_RS20660 0.71 +0.0 4,654,249 + PFLU_RS20660 0.71 -1.5 4,654,249 + PFLU_RS20660 0.71 -0.9 4,654,249 + PFLU_RS20660 0.71 -1.0 4,654,249 + PFLU_RS20660 0.71 -0.3 4,654,249 + PFLU_RS20660 0.71 +0.1 4,654,249 + PFLU_RS20660 0.71 +0.1 4,654,249 + PFLU_RS20660 0.71 -1.0 4,654,249 + PFLU_RS20660 0.71 -1.2 4,654,249 + PFLU_RS20660 0.71 -0.1 4,654,249 + PFLU_RS20660 0.71 -1.3 4,654,249 + PFLU_RS20660 0.71 -0.0 4,654,249 + PFLU_RS20660 0.71 -1.5 4,654,250 - PFLU_RS20660 0.71 +1.5 4,654,250 - PFLU_RS20660 0.71 +0.1 4,654,250 - PFLU_RS20660 0.71 -1.7 4,654,250 - PFLU_RS20660 0.71 -0.3 4,654,250 - PFLU_RS20660 0.71 +0.9 4,654,250 - PFLU_RS20660 0.71 +0.7 4,654,250 - PFLU_RS20660 0.71 -1.0 4,654,250 - PFLU_RS20660 0.71 -0.7 4,654,451 - PFLU_RS20660 0.88 -0.4 4,654,504 + -0.7 4,654,504 + -0.9 4,654,504 + -0.7 4,654,504 + +0.6 4,654,504 + -1.0 4,654,504 + -0.4 4,654,504 + -1.5 4,654,504 + +1.3 4,654,504 + -0.3 4,654,505 - -0.8 4,654,505 - +1.3 4,654,505 - -2.0 4,654,505 - -2.8 4,654,505 - +0.4 4,654,505 - +0.7 4,654,505 - +1.0 4,654,505 - -1.4 4,654,505 - -1.6 4,654,505 - +1.0 4,654,505 - -0.3 4,654,505 - -2.0 4,654,505 - -0.3 4,654,524 + -0.4 4,654,524 + -0.2 4,654,524 + -0.9 4,654,524 + -0.6 4,654,524 + +1.3 4,654,525 - +1.3 4,654,525 - -1.9 4,654,525 - -0.0 4,654,525 - -0.8 4,654,591 + +0.3 4,654,591 + +0.2 4,654,591 + -0.1 4,654,591 + +0.9 4,654,591 + -0.5 4,654,591 + -0.3 4,654,591 + +0.6 4,654,591 + -0.9 4,654,592 - +1.3 4,654,592 - +0.7 4,654,592 - +0.3 4,654,899 + -0.8 4,654,899 + +0.1 4,654,899 + -0.1 4,654,899 + -0.5 4,654,900 - +1.9 4,654,900 - -1.2 4,655,110 + +0.0 4,655,110 + -1.5 4,655,111 - -0.0 4,655,122 + -0.2 4,655,122 + +0.8 4,655,122 + +0.3 4,655,122 + -0.8 4,655,122 + -0.2 4,655,122 + -0.2 4,655,122 + -0.8 4,655,122 + -0.1 4,655,122 + +1.0 4,655,122 + -0.3 4,655,122 + -0.3 4,655,122 + -0.7 4,655,122 + +0.9 4,655,122 + +0.2 4,655,123 - +1.3 4,655,123 - -0.2 4,655,123 - +0.7 4,655,123 - -1.0 4,655,123 - -0.4 4,655,123 - -3.1 4,655,123 - -0.7 4,655,123 - -0.2 4,655,123 - -0.3 4,655,123 - -0.2 4,655,123 - -0.0 4,655,123 - -0.1 4,655,128 + -0.7 4,655,128 + -0.3 4,655,128 + -0.9 4,655,128 + -0.3 4,655,128 + -0.0 4,655,128 + +1.5 4,655,128 + +0.3 4,655,128 + -0.7 4,655,128 + -0.6 4,655,128 + -2.4 4,655,128 + -0.4 4,655,128 + +1.9 4,655,128 + -0.1 4,655,128 + -0.1 4,655,128 + +0.5 4,655,129 - +1.5 4,655,129 - +1.3 4,655,129 - -0.7 4,655,129 - +0.5 4,655,163 + +1.3 4,655,216 + PFLU_RS20670 0.10 +1.6 4,655,216 + PFLU_RS20670 0.10 -0.7 4,655,216 + PFLU_RS20670 0.10 +0.1 4,655,216 + PFLU_RS20670 0.10 +0.7 4,655,217 - PFLU_RS20670 0.10 +0.3 4,655,217 - PFLU_RS20670 0.10 -0.1 4,655,217 - PFLU_RS20670 0.10 -0.4 4,655,217 - PFLU_RS20670 0.10 +0.8 4,655,217 - PFLU_RS20670 0.10 -1.4 4,655,264 + PFLU_RS20670 0.16 -0.7 4,655,347 + PFLU_RS20670 0.25 +0.1 4,655,348 - PFLU_RS20670 0.25 -0.0 4,655,348 - PFLU_RS20670 0.25 +0.8 4,655,348 - PFLU_RS20670 0.25 +0.6 4,655,348 - PFLU_RS20670 0.25 +1.1 4,655,419 + PFLU_RS20670 0.33 +0.7 4,655,443 + PFLU_RS20670 0.36 -0.3 4,655,443 + PFLU_RS20670 0.36 +0.3 4,655,443 + PFLU_RS20670 0.36 +0.4 4,655,443 + PFLU_RS20670 0.36 +0.9 4,655,443 + PFLU_RS20670 0.36 +1.3 4,655,443 + PFLU_RS20670 0.36 -0.3 4,655,444 - PFLU_RS20670 0.36 +0.3 4,655,444 - PFLU_RS20670 0.36 +2.6 4,655,444 - PFLU_RS20670 0.36 +0.9 4,655,444 - PFLU_RS20670 0.36 +1.0 4,655,444 - PFLU_RS20670 0.36 +1.1 4,655,444 - PFLU_RS20670 0.36 +0.2 4,655,444 - PFLU_RS20670 0.36 -0.9 4,655,444 - PFLU_RS20670 0.36 +0.2 4,655,444 - PFLU_RS20670 0.36 +0.7 4,655,444 - PFLU_RS20670 0.36 -0.7 4,655,444 - PFLU_RS20670 0.36 -0.1 4,655,444 - PFLU_RS20670 0.36 -0.1 4,655,666 + PFLU_RS20670 0.62 +1.0 4,655,668 + PFLU_RS20670 0.62 +0.9 4,655,668 + PFLU_RS20670 0.62 +0.6 4,655,668 + PFLU_RS20670 0.62 +0.3 4,655,668 + PFLU_RS20670 0.62 +1.3 4,655,669 - PFLU_RS20670 0.62 -0.5 4,655,669 - PFLU_RS20670 0.62 +0.7 4,655,669 - PFLU_RS20670 0.62 +0.5 4,655,669 - PFLU_RS20670 0.62 -0.7 4,655,669 - PFLU_RS20670 0.62 +0.2 4,655,669 - PFLU_RS20670 0.62 +0.3 4,655,690 + PFLU_RS20670 0.64 -0.8 4,655,798 + PFLU_RS20670 0.77 +0.7 4,655,798 + PFLU_RS20670 0.77 -0.5 4,655,799 - PFLU_RS20670 0.77 -0.3 4,655,799 - PFLU_RS20670 0.77 +1.3 4,655,800 + PFLU_RS20670 0.77 -0.6 4,655,801 - PFLU_RS20670 0.77 -1.1 4,656,064 + -0.5 4,656,071 - +1.1 4,656,111 + +1.3 4,656,111 + +0.5 4,656,111 + +1.2 4,656,112 - +1.3 4,656,112 - +0.6 4,656,112 - +1.0 4,656,172 + -0.2 4,656,172 + -0.4 4,656,173 - -0.8 4,656,173 - -1.3 4,656,178 + +0.6 4,656,403 + PFLU_RS20675 0.22 +0.2 4,656,404 - PFLU_RS20675 0.22 -0.0 4,656,404 - PFLU_RS20675 0.22 +0.3 4,656,574 + PFLU_RS20675 0.34 +0.2 4,656,574 + PFLU_RS20675 0.34 -0.3 4,656,574 + PFLU_RS20675 0.34 -0.2 4,656,574 + PFLU_RS20675 0.34 -2.1 4,656,574 + PFLU_RS20675 0.34 +0.2 4,656,574 + PFLU_RS20675 0.34 -0.4 4,656,574 + PFLU_RS20675 0.34 -0.1 4,656,574 + PFLU_RS20675 0.34 -0.2 4,656,574 + PFLU_RS20675 0.34 +0.5 4,656,574 + PFLU_RS20675 0.34 -0.2 4,656,575 - PFLU_RS20675 0.34 -1.4 4,656,575 - PFLU_RS20675 0.34 +0.4 4,656,575 - PFLU_RS20675 0.34 -0.5 4,656,575 - PFLU_RS20675 0.34 +1.2 4,656,575 - PFLU_RS20675 0.34 -1.0 4,656,575 - PFLU_RS20675 0.34 -0.5 4,656,575 - PFLU_RS20675 0.34 +0.3 4,656,575 - PFLU_RS20675 0.34 +0.4 4,656,575 - PFLU_RS20675 0.34 +0.2 4,656,575 - PFLU_RS20675 0.34 -0.8 4,656,575 - PFLU_RS20675 0.34 +1.1 4,656,614 - PFLU_RS20675 0.37 +1.0 4,656,717 + PFLU_RS20675 0.44 +0.3 4,656,717 + PFLU_RS20675 0.44 +0.6 4,656,717 + PFLU_RS20675 0.44 -0.3 4,656,718 - PFLU_RS20675 0.44 -1.3 4,656,718 - PFLU_RS20675 0.44 -0.1 4,656,947 + PFLU_RS20675 0.61 -0.6 4,656,947 + PFLU_RS20675 0.61 +0.1 4,656,948 - PFLU_RS20675 0.61 +0.6 4,656,948 - PFLU_RS20675 0.61 -0.6 4,656,948 - PFLU_RS20675 0.61 -1.5 4,656,948 - PFLU_RS20675 0.61 +0.3 4,656,948 - PFLU_RS20675 0.61 -2.2 4,656,948 - PFLU_RS20675 0.61 -0.3 4,656,948 - PFLU_RS20675 0.61 +0.7 4,656,948 - PFLU_RS20675 0.61 -0.0
Or see this region's nucleotide sequence