Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2706

Experiment: LB, pH8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, pH8
2,819,147	+		Ga0059261_2705	0.51	-0.2
2,819,147	+		Ga0059261_2705	0.51	+1.5
2,819,147	+		Ga0059261_2705	0.51	-0.2
2,819,148	-		Ga0059261_2705	0.51	-0.2
2,819,148	-		Ga0059261_2705	0.51	-1.1
2,819,148	-		Ga0059261_2705	0.51	-1.1
2,819,148	-		Ga0059261_2705	0.51	+0.0
2,819,264	+		Ga0059261_2705	0.57	+0.0
2,819,265	-				-1.3
2,819,265	-		Ga0059261_2705	0.57	-0.7
2,819,265	-				-0.3
2,819,363	+		Ga0059261_2705	0.63	+0.3
2,819,363	+		Ga0059261_2705	0.63	-0.7
2,819,363	+		Ga0059261_2705	0.63	-0.6
2,819,364	-		Ga0059261_2705	0.63	-1.0
2,819,364	-		Ga0059261_2705	0.63	-1.1
2,819,364	-		Ga0059261_2705	0.63	-0.2
2,819,364	-		Ga0059261_2705	0.63	+0.0
2,819,364	-		Ga0059261_2705	0.63	-0.3
2,819,396	+		Ga0059261_2705	0.64	+0.3
2,819,396	+		Ga0059261_2705	0.64	+1.3
2,819,397	-		Ga0059261_2705	0.65	+0.4
2,819,397	-		Ga0059261_2705	0.65	-0.3
2,819,397	-				-1.3
2,819,397	-		Ga0059261_2705	0.65	-0.6
2,819,435	+		Ga0059261_2705	0.67	-0.7
2,819,435	+		Ga0059261_2705	0.67	-0.3
2,819,436	-		Ga0059261_2705	0.67	+0.3
2,819,453	+		Ga0059261_2705	0.68	+0.7
2,819,453	+		Ga0059261_2705	0.68	+0.4
2,819,453	+		Ga0059261_2705	0.68	+0.3
2,819,453	+		Ga0059261_2705	0.68	+0.3
2,819,454	-				+0.3
2,819,454	-		Ga0059261_2705	0.68	-0.4
2,819,454	-		Ga0059261_2705	0.68	+0.8
2,819,454	-		Ga0059261_2705	0.68	-0.1
2,819,474	+		Ga0059261_2705	0.69	+0.9
2,819,574	+		Ga0059261_2705	0.74	-0.7
2,819,574	+		Ga0059261_2705	0.74	+1.1
2,819,574	+		Ga0059261_2705	0.74	-0.9
2,819,574	+		Ga0059261_2705	0.74	+0.5
2,819,574	+		Ga0059261_2705	0.74	-0.1
2,819,574	+		Ga0059261_2705	0.74	+0.3
2,819,575	-		Ga0059261_2705	0.74	-0.7
2,819,575	-		Ga0059261_2705	0.74	-0.7
2,819,575	-		Ga0059261_2705	0.74	-0.5
2,819,575	-		Ga0059261_2705	0.74	+0.9
2,819,575	-		Ga0059261_2705	0.74	-0.1
2,819,576	+		Ga0059261_2705	0.74	-0.7
2,819,576	+		Ga0059261_2705	0.74	+0.7
2,819,577	-		Ga0059261_2705	0.74	-0.3
2,819,577	-		Ga0059261_2705	0.74	-0.2
2,819,577	-		Ga0059261_2705	0.74	-0.1
2,819,585	+		Ga0059261_2705	0.75	+0.5
2,819,586	-		Ga0059261_2705	0.75	-0.3
2,819,657	+		Ga0059261_2705	0.78	+0.4
2,819,657	+		Ga0059261_2705	0.78	+0.0
2,819,657	+		Ga0059261_2705	0.78	-0.4
2,819,657	+		Ga0059261_2705	0.78	-0.8
2,819,657	+		Ga0059261_2705	0.78	-0.7
2,819,658	-		Ga0059261_2705	0.78	+0.3
2,819,658	-		Ga0059261_2705	0.78	+0.4
2,819,658	-		Ga0059261_2705	0.78	-1.1
2,819,738	+		Ga0059261_2705	0.83	-0.1
2,819,739	-		Ga0059261_2705	0.83	-0.6
2,819,739	-		Ga0059261_2705	0.83	-0.2
2,819,769	+		Ga0059261_2705	0.84	-0.3
2,819,769	+		Ga0059261_2705	0.84	+0.7
2,819,769	+		Ga0059261_2705	0.84	-0.0
2,819,769	+		Ga0059261_2705	0.84	+0.4
2,819,769	+		Ga0059261_2705	0.84	-0.0
2,819,769	+		Ga0059261_2705	0.84	+1.3
2,819,769	+		Ga0059261_2705	0.84	-0.6
2,819,769	+		Ga0059261_2705	0.84	+0.8
2,819,770	-		Ga0059261_2705	0.84	+0.1
2,819,770	-		Ga0059261_2705	0.84	+1.0
2,819,770	-		Ga0059261_2705	0.84	-0.4
2,819,770	-		Ga0059261_2705	0.84	+0.0
2,819,770	-				+0.3
2,819,771	+		Ga0059261_2705	0.85	+0.3
2,819,771	+		Ga0059261_2705	0.85	-0.2
2,819,771	+		Ga0059261_2705	0.85	-0.2
2,819,771	+		Ga0059261_2705	0.85	+0.8
2,819,771	+		Ga0059261_2705	0.85	-0.2
2,819,771	+		Ga0059261_2705	0.85	-0.2
2,819,772	-		Ga0059261_2705	0.85	+0.8
2,819,772	-		Ga0059261_2705	0.85	+0.8
2,819,772	-		Ga0059261_2705	0.85	+0.8
2,819,772	-		Ga0059261_2705	0.85	+0.5
2,819,772	-		Ga0059261_2705	0.85	+0.0
2,819,772	-		Ga0059261_2705	0.85	+0.5
2,819,772	-		Ga0059261_2705	0.85	-0.6
2,819,772	-		Ga0059261_2705	0.85	+0.3
2,819,784	+		Ga0059261_2705	0.85	-1.3
2,819,784	+		Ga0059261_2705	0.85	-0.4
2,819,785	-		Ga0059261_2705	0.85	+0.4
2,819,785	-		Ga0059261_2705	0.85	-0.5
2,819,785	-		Ga0059261_2705	0.85	+0.8
2,819,785	-		Ga0059261_2705	0.85	-1.3
2,819,837	+		Ga0059261_2705	0.88	+0.1
2,819,837	+		Ga0059261_2705	0.88	+1.3
2,819,838	-		Ga0059261_2705	0.88	-0.3
2,820,056	+				+0.3
2,820,056	+				-0.4
2,820,056	+				+0.3
2,820,056	+				+0.4
2,820,056	+				+0.7
2,820,056	+				+0.8
2,820,056	+				-0.4
2,820,057	-				-0.1
2,820,057	-				-0.6
2,820,057	-				-1.1
2,820,088	+				-0.3
2,820,088	+				-0.1
2,820,088	+				-1.1
2,820,088	+				-0.3
2,820,089	-				+0.3
2,820,089	-				-0.1
2,820,089	-				-1.5
2,820,214	+		Ga0059261_2706	0.15	-0.5
2,820,214	+		Ga0059261_2706	0.15	-0.1
2,820,214	+		Ga0059261_2706	0.15	-0.6
2,820,215	-		Ga0059261_2706	0.15	-0.6
2,820,215	-		Ga0059261_2706	0.15	+0.9
2,820,215	-		Ga0059261_2706	0.15	-0.9
2,820,275	-		Ga0059261_2706	0.23	+0.3
2,820,311	+		Ga0059261_2706	0.28	-0.4
2,820,311	+		Ga0059261_2706	0.28	+0.7
2,820,312	-		Ga0059261_2706	0.28	+1.1
2,820,312	-		Ga0059261_2706	0.28	-0.8
2,820,449	+		Ga0059261_2706	0.48	-1.2
2,820,449	+		Ga0059261_2706	0.48	-2.1
2,820,450	-		Ga0059261_2706	0.48	-0.4
2,820,450	-		Ga0059261_2706	0.48	+0.3
2,820,450	-		Ga0059261_2706	0.48	-0.2
2,820,450	-		Ga0059261_2706	0.48	-0.0
2,820,721	+		Ga0059261_2706	0.86	-0.3
2,820,770	-				-0.4
2,820,770	-				+1.7
2,820,770	-				+0.8
2,820,778	+				+2.3
2,820,778	+				-0.6
2,820,778	+				-0.5
2,820,779	-				-1.0
2,820,779	-				+0.2
2,820,779	-				-2.1
2,820,779	-				+0.3
2,820,779	-				-0.7
2,821,007	+		Ga0059261_2707	0.18	-0.4
2,821,008	-		Ga0059261_2707	0.18	+1.2
2,821,008	-		Ga0059261_2707	0.18	-1.3
2,821,008	-		Ga0059261_2707	0.18	-1.3
2,821,155	+		Ga0059261_2707	0.33	-1.6
2,821,155	+		Ga0059261_2707	0.33	-0.3
2,821,156	-		Ga0059261_2707	0.33	-1.9
2,821,156	-		Ga0059261_2707	0.33	-0.8
2,821,157	+		Ga0059261_2707	0.34	-1.6
2,821,157	+		Ga0059261_2707	0.34	-2.2
2,821,157	+		Ga0059261_2707	0.34	-0.8
2,821,157	+				-0.8
2,821,157	+				-0.3
2,821,157	+		Ga0059261_2707	0.34	-1.1
2,821,157	+				-2.1
2,821,157	+		Ga0059261_2707	0.34	-0.5
2,821,157	+		Ga0059261_2707	0.34	-0.8
2,821,157	+		Ga0059261_2707	0.34	-1.2
2,821,158	-		Ga0059261_2707	0.34	-1.3
2,821,158	-		Ga0059261_2707	0.34	-0.8
2,821,158	-		Ga0059261_2707	0.34	-1.5
2,821,158	-		Ga0059261_2707	0.34	-0.5
2,821,158	-		Ga0059261_2707	0.34	-2.1
2,821,416	+		Ga0059261_2707	0.60	+0.2
2,821,416	+		Ga0059261_2707	0.60	+0.1
2,821,416	+		Ga0059261_2707	0.60	-1.2
2,821,416	+		Ga0059261_2707	0.60	+0.2
2,821,416	+		Ga0059261_2707	0.60	-2.3
2,821,417	-		Ga0059261_2707	0.60	-0.2
2,821,418	+		Ga0059261_2707	0.60	+0.2
2,821,418	+		Ga0059261_2707	0.60	-2.3
2,821,418	+		Ga0059261_2707	0.60	+1.2
2,821,418	+		Ga0059261_2707	0.60	-0.8
2,821,418	+		Ga0059261_2707	0.60	+2.1
2,821,418	+		Ga0059261_2707	0.60	-0.8
2,821,418	+		Ga0059261_2707	0.60	-1.3
2,821,419	-		Ga0059261_2707	0.61	+0.2
2,821,419	-		Ga0059261_2707	0.61	-0.8
2,821,419	-		Ga0059261_2707	0.61	-1.8
2,821,419	-		Ga0059261_2707	0.61	-1.3
2,821,419	-				-0.8
2,821,419	-		Ga0059261_2707	0.61	-0.8
2,821,419	-		Ga0059261_2707	0.61	-0.3
2,821,419	-		Ga0059261_2707	0.61	-2.0
2,821,419	-		Ga0059261_2707	0.61	+1.0
2,821,580	+				-0.8
2,821,580	+		Ga0059261_2707	0.77	-0.9
2,821,580	+		Ga0059261_2707	0.77	-2.3
2,821,581	-		Ga0059261_2707	0.77	-0.9
2,821,581	-		Ga0059261_2707	0.77	-1.3
2,821,581	-		Ga0059261_2707	0.77	+0.7
2,821,581	-		Ga0059261_2707	0.77	-1.5
2,821,637	+		Ga0059261_2707	0.83	+0.2
2,821,637	+		Ga0059261_2707	0.83	-1.3
2,821,637	+		Ga0059261_2707	0.83	-2.1
2,821,638	-		Ga0059261_2707	0.83	-0.1
2,821,638	-		Ga0059261_2707	0.83	-1.8
2,821,638	-		Ga0059261_2707	0.83	-2.1
2,821,638	-		Ga0059261_2707	0.83	+0.2
2,821,638	-		Ga0059261_2707	0.83	+0.2
2,821,638	-		Ga0059261_2707	0.83	-1.1
2,821,638	-		Ga0059261_2707	0.83	-1.8