Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1959

Experiment: LB, pH8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, pH8
2,064,509	+				+0.2
2,064,509	+				-0.1
2,064,509	+				+0.3
2,064,509	+				-0.1
2,064,588	+		Ga0059261_1957	0.20	-0.1
2,064,589	-		Ga0059261_1957	0.21	+0.3
2,064,589	-		Ga0059261_1957	0.21	+0.3
2,064,589	-		Ga0059261_1957	0.21	+0.9
2,064,602	-		Ga0059261_1957	0.24	-0.7
2,064,645	+		Ga0059261_1957	0.36	+0.3
2,064,645	+		Ga0059261_1957	0.36	+1.2
2,064,666	+		Ga0059261_1957	0.42	+0.1
2,064,667	-				-1.7
2,064,982	-		Ga0059261_1958	0.22	+0.2
2,064,982	-		Ga0059261_1958	0.22	+0.7
2,064,982	-		Ga0059261_1958	0.22	-1.9
2,064,982	-		Ga0059261_1958	0.22	+0.3
2,064,982	-		Ga0059261_1958	0.22	-0.4
2,064,989	+		Ga0059261_1958	0.24	+0.3
2,064,989	+		Ga0059261_1958	0.24	+0.3
2,064,990	-		Ga0059261_1958	0.24	-0.7
2,064,990	-		Ga0059261_1958	0.24	+0.2
2,065,232	+		Ga0059261_1958	0.75	-0.7
2,065,387	+				-0.5
2,065,427	-				-0.7
2,065,427	-				+0.3
2,065,427	-				-0.4
2,065,734	+		Ga0059261_1959	0.31	-1.0
2,065,734	+		Ga0059261_1959	0.31	+0.1
2,065,734	+		Ga0059261_1959	0.31	-0.2
2,065,734	+		Ga0059261_1959	0.31	-0.1
2,065,734	+		Ga0059261_1959	0.31	-0.3
2,065,734	+		Ga0059261_1959	0.31	-0.8
2,065,735	-		Ga0059261_1959	0.31	+0.2
2,065,735	-		Ga0059261_1959	0.31	+0.6
2,065,735	-		Ga0059261_1959	0.31	+0.0
2,065,735	-		Ga0059261_1959	0.31	-0.2
2,065,735	-		Ga0059261_1959	0.31	+0.0
2,065,735	-		Ga0059261_1959	0.31	+1.0
2,065,735	-		Ga0059261_1959	0.31	-1.7
2,065,956	+		Ga0059261_1959	0.55	-0.2
2,065,956	+		Ga0059261_1959	0.55	+0.0
2,065,956	+		Ga0059261_1959	0.55	-0.5
2,065,956	+		Ga0059261_1959	0.55	+0.3
2,065,956	+		Ga0059261_1959	0.55	-0.5
2,065,956	+		Ga0059261_1959	0.55	+0.3
2,065,957	-		Ga0059261_1959	0.55	-1.0
2,065,957	-		Ga0059261_1959	0.55	-0.7
2,065,957	-		Ga0059261_1959	0.55	-0.1
2,065,957	-		Ga0059261_1959	0.55	-0.5
2,065,957	-		Ga0059261_1959	0.55	+0.0
2,065,957	-		Ga0059261_1959	0.55	-0.8
2,065,957	-		Ga0059261_1959	0.55	-0.2
2,065,958	+		Ga0059261_1959	0.56	+0.1
2,065,958	+		Ga0059261_1959	0.56	-2.0
2,065,958	+		Ga0059261_1959	0.56	-1.0
2,065,959	-		Ga0059261_1959	0.56	-0.3
2,065,959	-		Ga0059261_1959	0.56	-0.5
2,065,959	-		Ga0059261_1959	0.56	-0.7
2,065,959	-		Ga0059261_1959	0.56	-0.4
2,065,959	-		Ga0059261_1959	0.56	-0.5
2,065,959	-		Ga0059261_1959	0.56	-0.8
2,066,350	+				+0.2
2,066,350	+				-1.6
2,066,351	-				-0.3
2,066,351	-				-0.1
2,066,378	+				+0.1
2,066,378	+				+0.6
2,066,378	+				-0.7
2,066,379	-				+2.0
2,066,379	-				+0.5
2,066,379	-				+0.1
2,066,392	+				-0.7
2,066,392	+				-0.3
2,066,394	+				+0.0
2,066,429	+				-0.5
2,066,429	+				-0.2
2,066,429	+				+0.3
2,066,429	+				-0.3
2,066,429	+				-0.2
2,066,429	+				+3.1
2,066,430	-				+1.3
2,066,430	-				+0.4
2,066,430	-				+0.7
2,066,430	-				+1.3
2,066,430	-				-0.7
2,066,430	-				+0.2
2,066,430	-				+1.5
2,066,675	+		Ga0059261_1960	0.40	-0.6
2,066,675	+		Ga0059261_1960	0.40	-0.0
2,066,675	+		Ga0059261_1960	0.40	-0.1
2,066,675	+		Ga0059261_1960	0.40	-0.7
2,066,675	+		Ga0059261_1960	0.40	-1.3
2,066,675	+		Ga0059261_1960	0.40	+0.1
2,066,675	+		Ga0059261_1960	0.40	+0.5
2,066,675	+		Ga0059261_1960	0.40	+0.7
2,066,675	+		Ga0059261_1960	0.40	+0.9
2,066,676	-		Ga0059261_1960	0.40	+0.2
2,066,676	-		Ga0059261_1960	0.40	+2.6
2,066,676	-		Ga0059261_1960	0.40	+0.3
2,066,676	-		Ga0059261_1960	0.40	-0.8
2,066,676	-		Ga0059261_1960	0.40	-0.0
2,066,676	-		Ga0059261_1960	0.40	-0.3
2,066,676	-		Ga0059261_1960	0.40	-0.3
2,066,693	+		Ga0059261_1960	0.43	+0.4
2,066,694	-		Ga0059261_1960	0.43	-0.1
2,066,715	+		Ga0059261_1960	0.46	-0.2
2,066,738	+		Ga0059261_1960	0.50	+0.4
2,066,738	+		Ga0059261_1960	0.50	+0.0
2,066,738	+		Ga0059261_1960	0.50	+0.0
2,066,738	+		Ga0059261_1960	0.50	+0.2
2,066,738	+		Ga0059261_1960	0.50	-0.4
2,066,738	+		Ga0059261_1960	0.50	+1.0
2,066,738	+		Ga0059261_1960	0.50	+0.0
2,066,738	+		Ga0059261_1960	0.50	-1.0
2,066,738	+		Ga0059261_1960	0.50	+0.5
2,066,739	-		Ga0059261_1960	0.50	+0.6
2,066,739	-		Ga0059261_1960	0.50	+1.1
2,066,739	-		Ga0059261_1960	0.50	-0.8
2,066,739	-		Ga0059261_1960	0.50	+1.3
2,066,739	-		Ga0059261_1960	0.50	-0.1
2,066,739	-		Ga0059261_1960	0.50	+0.6
2,066,876	+		Ga0059261_1960	0.72	+0.3
2,066,876	+		Ga0059261_1960	0.72	-0.3
2,066,876	+		Ga0059261_1960	0.72	+0.2
2,066,876	+		Ga0059261_1960	0.72	+0.0
2,066,876	+		Ga0059261_1960	0.72	-0.2
2,066,876	+		Ga0059261_1960	0.72	+0.0
2,066,876	+		Ga0059261_1960	0.72	-0.4
2,066,876	+		Ga0059261_1960	0.72	+1.6
2,066,877	-		Ga0059261_1960	0.72	+0.8
2,066,877	-		Ga0059261_1960	0.72	+0.8
2,066,877	-		Ga0059261_1960	0.72	-0.3
2,066,877	-		Ga0059261_1960	0.72	+1.3
2,066,877	-		Ga0059261_1960	0.72	-0.5
2,067,047	+				-0.4
2,067,048	-				+0.3
2,067,048	-				+2.3
2,067,048	-				-0.7
2,067,266	+				+0.9
2,067,266	+				+0.3
2,067,266	+				-1.0
2,067,266	+				+0.7
2,067,266	+				-1.1
2,067,266	+				+0.3
2,067,266	+				+0.3
2,067,266	+				+0.4
2,067,267	-				-0.7
2,067,267	-				+0.1
2,067,267	-				-2.5
2,067,267	-				-1.5
2,067,267	-				-0.5
2,067,267	-				-0.6
2,067,267	-				-0.4
2,067,267	-				-1.1
2,067,267	-				-0.5
2,067,267	-				-1.2
2,067,267	-				-2.0
2,067,329	+				-1.0
2,067,329	+				-1.3
2,067,329	+				-0.7
2,067,329	+				+0.1
2,067,329	+				-0.4
2,067,330	-				-0.7
2,067,330	-				+0.8
2,067,330	-				-0.3
2,067,330	-				-2.2
2,067,330	-				-1.4