Experiment: m.b. Aluminum chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3694 and Dshi_3695 are separated by 157 nucleotides Dshi_3695 and Dshi_3696 are separated by 38 nucleotides
Dshi_3694: Dshi_3694 - hypothetical protein (RefSeq), at 95,796 to 97,667
_3694
Dshi_3695: Dshi_3695 - type III restriction protein res subunit (RefSeq), at 97,825 to 100,266
_3695
Dshi_3696: Dshi_3696 - integrase family protein (RefSeq), at 100,305 to 101,309
_3696
Position (kb) 97
98
99
100
101 Strain fitness (log2 ratio) -2
-1
0
1 at 96.826 kb on - strand, within Dshi_3694 at 96.862 kb on - strand, within Dshi_3694 at 96.968 kb on + strand, within Dshi_3694 at 96.970 kb on + strand, within Dshi_3694 at 96.970 kb on + strand, within Dshi_3694 at 96.970 kb on + strand, within Dshi_3694 at 96.992 kb on + strand, within Dshi_3694 at 97.048 kb on + strand, within Dshi_3694 at 97.055 kb on + strand, within Dshi_3694 at 97.056 kb on - strand, within Dshi_3694 at 97.056 kb on - strand, within Dshi_3694 at 97.082 kb on - strand, within Dshi_3694 at 97.082 kb on - strand, within Dshi_3694 at 97.082 kb on - strand, within Dshi_3694 at 97.082 kb on - strand, within Dshi_3694 at 97.198 kb on - strand, within Dshi_3694 at 97.260 kb on + strand, within Dshi_3694 at 97.310 kb on - strand, within Dshi_3694 at 97.328 kb on - strand, within Dshi_3694 at 97.374 kb on + strand, within Dshi_3694 at 97.384 kb on + strand, within Dshi_3694 at 97.417 kb on - strand, within Dshi_3694 at 97.417 kb on - strand, within Dshi_3694 at 97.448 kb on + strand, within Dshi_3694 at 97.456 kb on - strand, within Dshi_3694 at 97.530 kb on - strand at 97.533 kb on + strand at 97.541 kb on - strand at 97.554 kb on + strand at 97.559 kb on + strand at 97.562 kb on - strand at 97.562 kb on - strand at 97.567 kb on - strand at 97.567 kb on - strand at 97.575 kb on - strand at 97.602 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 0.5 mM remove 96,826 - Dshi_3694 0.55 -0.4 96,862 - Dshi_3694 0.57 -1.1 96,968 + Dshi_3694 0.63 +1.3 96,970 + Dshi_3694 0.63 +0.4 96,970 + Dshi_3694 0.63 -0.2 96,970 + Dshi_3694 0.63 +0.5 96,992 + Dshi_3694 0.64 +0.1 97,048 + Dshi_3694 0.67 -0.1 97,055 + Dshi_3694 0.67 +1.3 97,056 - Dshi_3694 0.67 +0.3 97,056 - Dshi_3694 0.67 -0.4 97,082 - Dshi_3694 0.69 +0.0 97,082 - Dshi_3694 0.69 -1.0 97,082 - Dshi_3694 0.69 -1.1 97,082 - Dshi_3694 0.69 -0.6 97,198 - Dshi_3694 0.75 -0.4 97,260 + Dshi_3694 0.78 +1.3 97,310 - Dshi_3694 0.81 +0.2 97,328 - Dshi_3694 0.82 +0.2 97,374 + Dshi_3694 0.84 +0.7 97,384 + Dshi_3694 0.85 -1.3 97,417 - Dshi_3694 0.87 +0.1 97,417 - Dshi_3694 0.87 +0.6 97,448 + Dshi_3694 0.88 +0.5 97,456 - Dshi_3694 0.89 +0.5 97,530 - -0.5 97,533 + -0.2 97,541 - -0.2 97,554 + -0.4 97,559 + -0.0 97,562 - -0.2 97,562 - -0.5 97,567 - +0.8 97,567 - -1.0 97,575 - -1.8 97,602 - -0.8
Or see this region's nucleotide sequence