Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3819

Experiment: LB, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, pH7
3,918,315	+		Ga0059261_3815	0.65	-1.0
3,918,316	-		Ga0059261_3815	0.66	-0.1
3,918,687	+		Ga0059261_3817	0.34	+0.3
3,918,687	+		Ga0059261_3817	0.34	+0.5
3,918,688	-		Ga0059261_3817	0.34	-1.9
3,918,688	-		Ga0059261_3817	0.34	+0.3
3,918,688	-		Ga0059261_3817	0.34	-0.3
3,918,688	-		Ga0059261_3817	0.34	+0.1
3,918,688	-		Ga0059261_3817	0.34	+1.3
3,918,897	+		Ga0059261_3817	0.79	+0.1
3,918,898	-		Ga0059261_3817	0.79	-0.1
3,918,898	-		Ga0059261_3817	0.79	-0.2
3,918,898	-		Ga0059261_3817	0.79	+0.3
3,918,946	+		Ga0059261_3817	0.90	+0.1
3,918,946	+		Ga0059261_3817	0.90	-0.3
3,918,946	+		Ga0059261_3817	0.90	+0.9
3,918,946	+		Ga0059261_3817	0.90	-0.1
3,918,946	+		Ga0059261_3817	0.90	+0.1
3,918,946	+		Ga0059261_3817	0.90	-0.1
3,918,947	-				+0.3
3,918,947	-				+0.6
3,918,947	-				+0.1
3,918,947	-				-1.4
3,918,948	+				+1.1
3,918,948	+				+0.1
3,918,948	+				+1.1
3,918,948	+				-0.7
3,918,948	+				-0.8
3,918,949	-				-0.5
3,918,949	-				-0.1
3,918,949	-				-0.0
3,918,962	+				-0.2
3,918,963	-				+0.9
3,919,035	+				-0.4
3,919,036	-				+0.1
3,919,036	-				-0.3
3,919,266	+				+0.0
3,919,277	+				-0.3
3,919,278	-				+1.1
3,919,278	-				+0.7
3,919,278	-				-0.4
3,919,278	-				-0.5
3,919,391	+		Ga0059261_3819	0.18	-0.2
3,919,392	-		Ga0059261_3819	0.18	-0.8
3,919,392	-		Ga0059261_3819	0.18	-1.4
3,919,392	-		Ga0059261_3819	0.18	-0.9
3,919,470	-		Ga0059261_3819	0.30	+0.3
3,919,470	-		Ga0059261_3819	0.30	-0.1
3,919,470	-		Ga0059261_3819	0.30	+0.1
3,919,555	+		Ga0059261_3819	0.43	-2.1
3,919,601	+		Ga0059261_3819	0.50	+0.5
3,919,601	+		Ga0059261_3819	0.50	-0.5
3,919,602	-		Ga0059261_3819	0.50	+0.3
3,919,602	-		Ga0059261_3819	0.50	+1.9
3,919,640	+		Ga0059261_3819	0.56	-0.1
3,919,641	-		Ga0059261_3819	0.56	-0.0
3,919,683	-		Ga0059261_3819	0.63	-0.1
3,919,762	+		Ga0059261_3819	0.75	-0.3
3,919,762	+		Ga0059261_3819	0.75	+0.5
3,919,787	+		Ga0059261_3819	0.78	-0.5
3,919,787	+		Ga0059261_3819	0.78	-1.1
3,919,787	+		Ga0059261_3819	0.78	-0.7
3,919,787	+		Ga0059261_3819	0.78	-1.2
3,919,788	-		Ga0059261_3819	0.79	+0.5
3,919,788	-		Ga0059261_3819	0.79	+0.1
3,919,788	-		Ga0059261_3819	0.79	-0.9
3,919,788	-		Ga0059261_3819	0.79	+0.0
3,919,788	-		Ga0059261_3819	0.79	-2.1
3,919,788	-		Ga0059261_3819	0.79	-0.1
3,919,788	-		Ga0059261_3819	0.79	-0.6
3,919,838	+		Ga0059261_3819	0.86	+0.0
3,919,838	+		Ga0059261_3819	0.86	-2.1
3,919,839	-		Ga0059261_3819	0.86	-0.1
3,919,839	-		Ga0059261_3819	0.86	+0.6
3,919,981	-				+0.3
3,919,981	-				-0.8
3,920,048	+		Ga0059261_3820	0.14	-0.1
3,920,048	+		Ga0059261_3820	0.14	-0.4
3,920,048	+		Ga0059261_3820	0.14	+0.8
3,920,048	+		Ga0059261_3820	0.14	+0.1
3,920,048	+		Ga0059261_3820	0.14	-0.4
3,920,049	-		Ga0059261_3820	0.14	-0.1
3,920,153	+		Ga0059261_3820	0.27	+0.1
3,920,153	+		Ga0059261_3820	0.27	+0.0
3,920,153	+		Ga0059261_3820	0.27	+0.3
3,920,153	+		Ga0059261_3820	0.27	-0.6
3,920,154	-		Ga0059261_3820	0.27	-0.1
3,920,154	-		Ga0059261_3820	0.27	+1.2
3,920,154	-		Ga0059261_3820	0.27	-0.2
3,920,154	-		Ga0059261_3820	0.27	-0.6
3,920,233	+		Ga0059261_3820	0.37	-0.9
3,920,397	-		Ga0059261_3820	0.57	-0.8
3,920,483	-		Ga0059261_3820	0.68	+0.4
3,920,496	+		Ga0059261_3820	0.69	-0.1
3,920,496	+		Ga0059261_3820	0.69	+0.3
3,920,496	+		Ga0059261_3820	0.69	+0.4
3,920,496	+		Ga0059261_3820	0.69	+0.4
3,920,496	+		Ga0059261_3820	0.69	+0.0
3,920,496	+		Ga0059261_3820	0.69	-1.1
3,920,497	-		Ga0059261_3820	0.69	+0.1
3,920,497	-		Ga0059261_3820	0.69	-0.4
3,920,497	-		Ga0059261_3820	0.69	+0.0
3,920,497	-		Ga0059261_3820	0.69	-0.0
3,920,497	-		Ga0059261_3820	0.69	-0.5
3,920,498	+		Ga0059261_3820	0.70	-0.5
3,920,498	+		Ga0059261_3820	0.70	-0.3
3,920,498	+		Ga0059261_3820	0.70	-0.5
3,920,498	+		Ga0059261_3820	0.70	+0.4
3,920,498	+		Ga0059261_3820	0.70	-0.5
3,920,498	+		Ga0059261_3820	0.70	-0.8
3,920,498	+		Ga0059261_3820	0.70	-0.6
3,920,498	+		Ga0059261_3820	0.70	+0.0
3,920,499	-		Ga0059261_3820	0.70	-0.2
3,920,499	-		Ga0059261_3820	0.70	+0.8
3,920,574	+		Ga0059261_3820	0.79	-0.0
3,920,603	+		Ga0059261_3820	0.83	+0.1
3,920,603	+				-1.1
3,920,646	+		Ga0059261_3820	0.88	+0.1
3,920,646	+		Ga0059261_3820	0.88	-1.6
3,920,646	+		Ga0059261_3820	0.88	+0.0
3,920,646	+		Ga0059261_3820	0.88	+1.5
3,920,646	+		Ga0059261_3820	0.88	-0.1
3,920,646	+		Ga0059261_3820	0.88	-0.4
3,920,647	-		Ga0059261_3820	0.88	+0.0
3,920,647	-		Ga0059261_3820	0.88	+0.0
3,920,647	-		Ga0059261_3820	0.88	+0.2
3,920,776	+				-1.1
3,920,776	+				-1.0
3,920,776	+				-0.7
3,920,777	-				-0.5
3,920,777	-				-0.5
3,920,777	-				+0.0
3,920,807	+				+1.9
3,920,807	+				+0.3
3,920,807	+				-1.3
3,920,808	-				+0.1
3,920,808	-				-0.1
3,920,808	-				+0.3
3,920,809	+				+0.5
3,920,809	+				+0.5
3,920,809	+				+1.3
3,920,809	+				+0.5
3,920,809	+				+0.2
3,920,809	+				-0.1
3,920,809	+				+0.9
3,920,809	+				-0.6
3,920,809	+				+0.4
3,920,809	+				+0.6
3,920,809	+				+0.4
3,920,809	+				+0.1
3,920,809	+				-0.3
3,920,809	+				-0.4
3,920,809	+				+0.4
3,920,809	+				-0.1
3,920,809	+				-0.1
3,920,809	+				+0.4
3,920,809	+				-0.0
3,920,809	+				+0.6
3,920,809	+				+0.6
3,920,810	-				-0.1
3,920,810	-				+0.2
3,920,810	-				-0.4
3,920,810	-				-0.5
3,920,810	-				+0.1
3,920,810	-				+0.1
3,920,810	-				+0.5
3,920,810	-				+0.3
3,920,810	-				-0.1
3,920,810	-				+0.9
3,920,810	-				+0.1
3,920,810	-				+0.4
3,920,810	-				+0.3
3,920,810	-				+1.9
3,920,810	-				-0.6
3,920,810	-				-0.4
3,920,810	-				+0.9
3,920,810	-				+0.0
3,920,810	-				-1.1
3,920,810	-				-0.7
3,920,810	-				+0.5
3,920,810	-				+0.2
3,920,810	-				+0.0
3,920,810	-				-0.1
3,920,810	-				+0.1
3,920,811	+				-1.7
3,920,811	+				+0.6
3,920,811	+				+0.6
3,920,811	+				+0.4
3,920,811	+				-0.5
3,920,811	+				-1.8
3,920,811	+				-1.1
3,920,811	+				-0.7
3,920,811	+				+1.5
3,920,811	+				+0.3
3,920,811	+				-0.0
3,920,811	+				+0.8
3,920,811	+				-0.1
3,920,811	+				+0.9
3,920,812	-				-0.4
3,920,812	-				+0.4
3,920,812	-				+0.4
3,920,812	-				+0.0
3,920,812	-				+0.6
3,920,812	-				-0.4
3,920,812	-				+0.3
3,920,812	-				-1.4
3,920,812	-				-1.4
3,920,812	-				-0.8
3,920,812	-				-0.5
3,920,812	-				+0.9
3,920,812	-				+1.1
3,920,812	-				+0.6
3,920,815	+				+0.3
3,920,815	+				-0.1
3,920,816	-				+0.9
3,920,816	-				-0.8