Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13935

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
3,162,512	+		AO356_13930	0.76	+0.3
3,162,512	+		AO356_13930	0.76	-0.6
3,162,512	+		AO356_13930	0.76	-0.3
3,162,512	+		AO356_13930	0.76	-0.4
3,162,564	+		AO356_13930	0.78	+1.8
3,162,564	+		AO356_13930	0.78	+0.4
3,162,564	+		AO356_13930	0.78	+0.6
3,162,564	+		AO356_13930	0.78	+0.2
3,162,565	-		AO356_13930	0.78	+0.8
3,162,847	-		AO356_13930	0.86	+0.0
3,162,847	-		AO356_13930	0.86	-0.3
3,162,868	-		AO356_13930	0.87	+0.0
3,162,891	+		AO356_13930	0.87	+0.2
3,162,892	-		AO356_13930	0.87	+1.3
3,162,930	+		AO356_13930	0.89	+0.3
3,162,930	+		AO356_13930	0.89	-0.4
3,162,930	+		AO356_13930	0.89	+1.3
3,162,930	+		AO356_13930	0.89	+0.6
3,162,930	+		AO356_13930	0.89	-0.4
3,162,930	+		AO356_13930	0.89	-1.1
3,162,930	+		AO356_13930	0.89	+0.0
3,162,930	+		AO356_13930	0.89	-0.1
3,162,930	+		AO356_13930	0.89	+0.1
3,162,930	+		AO356_13930	0.89	+1.1
3,162,931	-		AO356_13930	0.89	+0.6
3,162,931	-		AO356_13930	0.89	-0.3
3,162,931	-		AO356_13930	0.89	-0.6
3,162,931	-		AO356_13930	0.89	+2.8
3,162,931	-		AO356_13930	0.89	+0.3
3,162,931	-		AO356_13930	0.89	+0.4
3,162,931	-		AO356_13930	0.89	+0.3
3,162,931	-		AO356_13930	0.89	+1.2
3,162,931	-		AO356_13930	0.89	+0.1
3,162,931	-		AO356_13930	0.89	-0.1
3,162,931	-		AO356_13930	0.89	+0.2
3,162,931	-		AO356_13930	0.89	+0.9
3,162,942	+		AO356_13930	0.89	-0.4
3,163,080	+				+0.8
3,163,080	+				+0.6
3,163,080	+				+0.7
3,163,080	+				+0.4
3,163,080	+				-0.5
3,163,080	+				-0.9
3,163,081	-				+0.4
3,163,081	-				-0.3
3,163,081	-				+0.5
3,163,146	+				-0.1
3,163,146	+				+0.2
3,163,147	-				-0.2
3,163,147	-				-0.1
3,163,147	-				-0.2
3,163,147	-				-0.2
3,163,147	-				-0.2
3,163,147	-				-0.3
3,163,173	+				+0.5
3,163,173	+				+0.3
3,163,173	+				-0.0
3,163,233	+				+0.4
3,163,281	+				+0.5
3,163,281	+				+1.2
3,163,281	+				+0.6
3,163,457	-				-0.2
3,163,472	+				+0.8
3,163,497	+				+0.3
3,163,497	+				-0.3
3,163,497	+				+0.1
3,163,498	-				+0.1
3,163,498	-				-0.2
3,163,498	-				+0.7
3,163,498	-				+0.7
3,163,671	+				+0.4
3,163,671	+				+0.5
3,163,672	-				-1.4
3,163,778	+		AO356_13935	0.16	+1.1
3,163,851	+		AO356_13935	0.19	+0.3
3,164,010	+		AO356_13935	0.28	-1.0
3,164,010	+		AO356_13935	0.28	+0.1
3,164,011	-		AO356_13935	0.28	-2.1
3,164,030	-		AO356_13935	0.29	+2.3
3,164,030	-		AO356_13935	0.29	+0.7
3,164,065	-		AO356_13935	0.31	+0.4
3,164,070	+		AO356_13935	0.31	+0.7
3,164,070	+		AO356_13935	0.31	-0.5
3,164,070	+		AO356_13935	0.31	-0.1
3,164,071	-		AO356_13935	0.31	-0.0
3,164,110	-		AO356_13935	0.33	+0.1
3,164,112	+		AO356_13935	0.33	+0.8
3,164,112	+		AO356_13935	0.33	-0.2
3,164,112	+		AO356_13935	0.33	-0.5
3,164,112	+		AO356_13935	0.33	-0.1
3,164,113	-		AO356_13935	0.33	+0.1
3,164,191	-		AO356_13935	0.38	-0.1
3,164,340	-		AO356_13935	0.46	+1.0
3,164,340	-		AO356_13935	0.46	+0.1
3,164,374	-		AO356_13935	0.47	+1.0
3,164,464	-		AO356_13935	0.52	-0.6
3,164,472	+		AO356_13935	0.53	+0.4
3,164,473	-		AO356_13935	0.53	-0.5
3,164,473	-		AO356_13935	0.53	+0.6
3,164,524	-		AO356_13935	0.55	+0.4
3,164,524	-		AO356_13935	0.55	+0.3
3,164,676	+		AO356_13935	0.64	+0.9
3,164,676	+		AO356_13935	0.64	-0.7
3,164,677	-		AO356_13935	0.64	+0.1
3,164,677	-		AO356_13935	0.64	+0.8
3,164,677	-		AO356_13935	0.64	+0.9
3,164,721	+		AO356_13935	0.66	-0.7
3,164,722	-		AO356_13935	0.66	+0.5
3,164,722	-		AO356_13935	0.66	+0.2
3,164,722	-		AO356_13935	0.66	+0.6
3,165,054	+		AO356_13935	0.84	+0.7
3,165,054	+		AO356_13935	0.84	+0.7
3,165,055	-		AO356_13935	0.84	+0.8
3,165,055	-		AO356_13935	0.84	-0.4
3,165,096	+		AO356_13935	0.86	+0.4
3,165,168	+		AO356_13935	0.90	-2.3
3,165,186	+				+0.6
3,165,186	+				+0.2
3,165,187	-				+0.9
3,165,253	-				+0.5
3,165,253	-				-0.3
3,165,294	+				+0.9
3,165,294	+				-1.3
3,165,391	+				-0.3
3,165,391	+				-0.1
3,165,392	-				+0.1
3,165,392	-				-0.5
3,165,954	+		AO356_13940	0.46	+0.3
3,165,954	+		AO356_13940	0.46	-0.0
3,165,954	+		AO356_13940	0.46	-0.2
3,165,954	+		AO356_13940	0.46	-0.2
3,165,954	+		AO356_13940	0.46	+0.8
3,165,955	-		AO356_13940	0.46	-0.0
3,165,955	-		AO356_13940	0.46	+1.7
3,165,955	-		AO356_13940	0.46	+0.6
3,165,955	-		AO356_13940	0.46	-0.6
3,165,955	-		AO356_13940	0.46	+0.1
3,166,050	+		AO356_13940	0.53	-1.1
3,166,050	+		AO356_13940	0.53	+0.2
3,166,050	+		AO356_13940	0.53	+1.1
3,166,050	+		AO356_13940	0.53	-0.9
3,166,050	+		AO356_13940	0.53	-0.0
3,166,050	+		AO356_13940	0.53	+0.1
3,166,050	+		AO356_13940	0.53	-1.2
3,166,051	-		AO356_13940	0.54	-1.2
3,166,051	-		AO356_13940	0.54	+0.7
3,166,051	-		AO356_13940	0.54	-0.3
3,166,051	-		AO356_13940	0.54	+0.8
3,166,068	+		AO356_13940	0.55	-0.7
3,166,116	+		AO356_13940	0.59	+0.0
3,166,116	+		AO356_13940	0.59	+0.9
3,166,117	-		AO356_13940	0.59	+0.5
3,166,117	-		AO356_13940	0.59	+0.2
3,166,117	-		AO356_13940	0.59	+0.6
3,166,117	-		AO356_13940	0.59	-0.3
3,166,128	+		AO356_13940	0.60	+1.1
3,166,128	+		AO356_13940	0.60	-1.4
3,166,128	+		AO356_13940	0.60	-0.6
3,166,128	+		AO356_13940	0.60	+1.6
3,166,129	-		AO356_13940	0.60	-0.4
3,166,129	-		AO356_13940	0.60	+0.7
3,166,129	-		AO356_13940	0.60	+0.2
3,166,168	-		AO356_13940	0.63	+1.4
3,166,191	+		AO356_13940	0.65	-0.1
3,166,191	+		AO356_13940	0.65	-0.4
3,166,191	+		AO356_13940	0.65	+0.7
3,166,192	-		AO356_13940	0.65	-0.9
3,166,192	-		AO356_13940	0.65	+0.4
3,166,192	-		AO356_13940	0.65	+0.2
3,166,289	+		AO356_13940	0.73	+0.1
3,166,290	-		AO356_13940	0.73	-0.8
3,166,317	+		AO356_13940	0.75	+0.9
3,166,317	+		AO356_13940	0.75	-1.5