Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1352
Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,403,282 | + | +0.5 | |||
1,403,485 | - | Dshi_1351 | 0.51 | -0.2 | |
1,403,553 | + | Dshi_1351 | 0.68 | -0.1 | |
1,403,755 | - | Dshi_1352 | 0.25 | +0.2 | |
1,403,755 | - | Dshi_1352 | 0.25 | -0.7 | |
1,403,937 | - | Dshi_1352 | 0.80 | +0.3 | |
1,404,089 | + | -0.1 | |||
1,404,089 | + | -0.3 | |||
1,404,101 | + | -0.1 | |||
1,404,180 | + | -0.3 | |||
1,404,188 | - | -1.0 | |||
1,404,471 | - | +0.4 | |||
1,404,480 | - | +0.0 | |||
1,404,595 | + | +0.3 | |||
1,404,711 | + | -0.4 | |||
1,404,746 | - | +0.5 |
Or see this region's nucleotide sequence