Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0046

Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.0005 mg/ml
45,333	-		Dshi_0044	0.36	-3.4
45,360	-		Dshi_0044	0.42	-2.5
45,430	-		Dshi_0044	0.57	-4.8
45,444	-		Dshi_0044	0.60	-4.3
45,451	+		Dshi_0044	0.61	-2.9
45,473	-		Dshi_0044	0.66	-4.1
45,495	-		Dshi_0044	0.70	-3.6
45,540	+		Dshi_0044	0.80	-3.8
45,540	+		Dshi_0044	0.80	-3.8
45,673	+				-0.3
45,683	+		Dshi_0045	0.11	-0.1
45,691	-		Dshi_0045	0.14	-0.6
45,712	+		Dshi_0045	0.19	-0.8
45,760	-		Dshi_0045	0.32	-0.1
45,783	-		Dshi_0045	0.38	-1.2
45,881	+		Dshi_0045	0.64	+0.2
45,886	+		Dshi_0045	0.66	+1.9
45,971	-		Dshi_0045	0.88	+0.4
46,018	-				-0.7
46,050	-				-0.5
46,139	-				-0.8
46,146	+				-0.5
46,150	-				-1.1
46,172	-				-1.2
46,220	+				+0.1
46,290	-				+0.9
46,325	+				+0.4
46,348	-				+0.2
46,427	+		Dshi_0046	0.29	-0.3
46,427	-		Dshi_0046	0.29	-1.1
46,453	-		Dshi_0046	0.35	+1.2
46,460	+		Dshi_0046	0.37	+0.9
46,468	-		Dshi_0046	0.39	-0.7
46,512	-		Dshi_0046	0.51	-1.2
46,512	-		Dshi_0046	0.51	-0.2
46,550	-		Dshi_0046	0.60	+0.1
46,596	+		Dshi_0046	0.72	-0.4
46,596	+		Dshi_0046	0.72	+0.3
46,596	+		Dshi_0046	0.72	-0.1
46,596	+		Dshi_0046	0.72	+2.9
46,604	-		Dshi_0046	0.74	-0.4
46,604	-		Dshi_0046	0.74	-0.3
46,604	-		Dshi_0046	0.74	-0.1
46,604	-		Dshi_0046	0.74	-0.6
46,609	+		Dshi_0046	0.75	-1.1
46,617	-		Dshi_0046	0.77	+0.5
46,617	-		Dshi_0046	0.77	-1.1
46,641	+		Dshi_0046	0.84	-2.4
46,641	+		Dshi_0046	0.84	-1.2
46,649	-		Dshi_0046	0.86	-0.2
46,673	-				-0.1
46,673	-				-0.2
46,683	-				-0.1
46,699	+				-0.7
46,699	+				+0.7
46,714	-				+0.1
46,846	-				-0.1
46,879	+				-0.4
46,887	-				-0.2
46,887	-				-0.6
46,887	-				-0.3
46,893	-				-0.1
46,901	+				+0.5
46,924	-				-0.3
46,952	+				-0.9
46,969	+				-1.3
46,970	-				+0.7
46,980	+				-0.3
47,042	+		Dshi_0047	0.14	+0.5
47,069	-		Dshi_0047	0.20	-0.8
47,074	+		Dshi_0047	0.21	-1.6
47,131	+		Dshi_0047	0.35	-0.1
47,131	+		Dshi_0047	0.35	-0.5
47,139	-		Dshi_0047	0.37	+1.1
47,147	-		Dshi_0047	0.39	-0.4
47,153	-		Dshi_0047	0.40	-0.3
47,155	-		Dshi_0047	0.40	-0.6
47,163	-		Dshi_0047	0.42	-0.9
47,163	-		Dshi_0047	0.42	+0.4
47,164	-		Dshi_0047	0.43	-0.6
47,167	+		Dshi_0047	0.43	-1.3
47,175	-				+2.9
47,182	+		Dshi_0047	0.47	-1.1
47,221	-		Dshi_0047	0.56	-0.9
47,237	+		Dshi_0047	0.60	-0.0
47,280	+		Dshi_0047	0.70	+0.1
47,280	+		Dshi_0047	0.70	-0.6
47,280	+		Dshi_0047	0.70	-0.6
47,280	+		Dshi_0047	0.70	+1.6
47,288	-		Dshi_0047	0.72	-0.2
47,288	-		Dshi_0047	0.72	-2.5
47,298	-		Dshi_0047	0.74	-0.7
47,298	-		Dshi_0047	0.74	-0.3
47,315	-		Dshi_0047	0.78	-0.2
47,328	+		Dshi_0047	0.81	+0.3
47,328	+		Dshi_0047	0.81	-0.5
47,328	+		Dshi_0047	0.81	+0.4
47,328	+		Dshi_0047	0.81	+0.1
47,328	+		Dshi_0047	0.81	+0.1
47,328	+		Dshi_0047	0.81	+0.4
47,375	-				-1.5
47,427	+				+0.4
47,427	+				-0.1
47,427	+				-2.2
47,427	+				+0.0
47,427	+				-0.2
47,435	-				+0.1
47,435	-				+0.1
47,435	-				+0.1
47,464	+				-1.3
47,470	+				-1.5
47,497	+				-0.6
47,505	-				-1.2
47,506	-				-1.2
47,525	-				-0.4
47,525	-				-0.6
47,525	-				-0.9
47,532	+				-1.1
47,541	+				+0.5
47,559	-				-0.7
47,568	+				-0.4
47,590	+		Dshi_0048	0.11	-0.9
47,618	+		Dshi_0048	0.14	-0.6
47,628	-		Dshi_0048	0.15	-0.7
47,654	+		Dshi_0048	0.18	-0.8
47,662	-		Dshi_0048	0.19	-0.1
47,662	-		Dshi_0048	0.19	-0.9