Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29135 and AO356_29140 are separated by 4 nucleotides AO356_29140 and AO356_29145 are separated by 69 nucleotides
AO356_29135: AO356_29135 - RND transporter, at 6,772,572 to 6,775,103
_29135
AO356_29140: AO356_29140 - BNR domain-containing protein, at 6,775,108 to 6,776,211
_29140
AO356_29145: AO356_29145 - hypothetical protein, at 6,776,281 to 6,777,645
_29145
Position (kb)
6775
6776
6777 Strain fitness (log2 ratio)
-1
0
1 at 6774.306 kb on + strand, within AO356_29135 at 6774.325 kb on + strand, within AO356_29135 at 6774.452 kb on - strand, within AO356_29135 at 6774.534 kb on + strand, within AO356_29135 at 6774.534 kb on + strand, within AO356_29135 at 6774.640 kb on + strand, within AO356_29135 at 6774.727 kb on + strand, within AO356_29135 at 6774.727 kb on + strand, within AO356_29135 at 6774.728 kb on - strand, within AO356_29135 at 6774.728 kb on - strand, within AO356_29135 at 6774.755 kb on - strand, within AO356_29135 at 6774.802 kb on + strand, within AO356_29135 at 6774.803 kb on - strand, within AO356_29135 at 6774.881 kb on - strand at 6774.881 kb on - strand at 6774.881 kb on - strand at 6774.892 kb on + strand at 6774.893 kb on - strand at 6776.068 kb on + strand, within AO356_29140 at 6776.169 kb on - strand at 6776.211 kb on + strand at 6776.216 kb on + strand at 6776.217 kb on - strand at 6776.351 kb on + strand at 6776.411 kb on + strand at 6776.455 kb on + strand, within AO356_29145 at 6776.549 kb on + strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.618 kb on - strand, within AO356_29145 at 6776.634 kb on - strand, within AO356_29145 at 6776.705 kb on + strand, within AO356_29145 at 6776.706 kb on - strand, within AO356_29145 at 6776.714 kb on + strand, within AO356_29145 at 6776.714 kb on + strand, within AO356_29145 at 6776.715 kb on - strand, within AO356_29145 at 6776.715 kb on - strand, within AO356_29145 at 6777.011 kb on + strand, within AO356_29145 at 6777.080 kb on + strand, within AO356_29145 at 6777.081 kb on - strand, within AO356_29145
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 6,774,306 + AO356_29135 0.68 +0.8 6,774,325 + AO356_29135 0.69 -0.4 6,774,452 - AO356_29135 0.74 +0.7 6,774,534 + AO356_29135 0.77 +0.6 6,774,534 + AO356_29135 0.77 +0.5 6,774,640 + AO356_29135 0.82 +0.2 6,774,727 + AO356_29135 0.85 +1.3 6,774,727 + AO356_29135 0.85 +1.1 6,774,728 - AO356_29135 0.85 +0.3 6,774,728 - AO356_29135 0.85 -0.3 6,774,755 - AO356_29135 0.86 +0.1 6,774,802 + AO356_29135 0.88 +0.0 6,774,803 - AO356_29135 0.88 +0.0 6,774,881 - -0.3 6,774,881 - +0.9 6,774,881 - +0.5 6,774,892 + -0.1 6,774,893 - -0.1 6,776,068 + AO356_29140 0.87 +0.6 6,776,169 - +0.0 6,776,211 + +0.8 6,776,216 + -0.0 6,776,217 - +0.1 6,776,351 + -0.4 6,776,411 + +0.6 6,776,455 + AO356_29145 0.13 +0.5 6,776,549 + AO356_29145 0.20 +0.4 6,776,618 - AO356_29145 0.25 +0.8 6,776,618 - AO356_29145 0.25 +0.9 6,776,618 - AO356_29145 0.25 +0.1 6,776,618 - AO356_29145 0.25 +0.3 6,776,634 - AO356_29145 0.26 +0.4 6,776,705 + AO356_29145 0.31 -0.3 6,776,706 - AO356_29145 0.31 +0.8 6,776,714 + AO356_29145 0.32 +0.2 6,776,714 + AO356_29145 0.32 +0.3 6,776,715 - AO356_29145 0.32 +1.3 6,776,715 - AO356_29145 0.32 -0.2 6,777,011 + AO356_29145 0.53 -0.4 6,777,080 + AO356_29145 0.59 -0.5 6,777,081 - AO356_29145 0.59 +1.0
Or see this region's nucleotide sequence