Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29035 and AO356_29040 are separated by 54 nucleotides AO356_29040 and AO356_29045 are separated by 342 nucleotides
AO356_29035: AO356_29035 - multidrug transporter CflA, at 6,748,640 to 6,749,860
_29035
AO356_29040: AO356_29040 - alanine racemase, at 6,749,915 to 6,751,189
_29040
AO356_29045: AO356_29045 - hypothetical protein, at 6,751,532 to 6,752,020
_29045
Position (kb)
6749
6750
6751
6752 Strain fitness (log2 ratio)
-1
0
1 at 6749.148 kb on + strand, within AO356_29035 at 6749.222 kb on + strand, within AO356_29035 at 6749.442 kb on - strand, within AO356_29035 at 6749.603 kb on + strand, within AO356_29035 at 6749.604 kb on - strand, within AO356_29035 at 6750.084 kb on + strand, within AO356_29040 at 6750.094 kb on + strand, within AO356_29040 at 6750.095 kb on - strand, within AO356_29040 at 6750.145 kb on - strand, within AO356_29040 at 6750.298 kb on - strand, within AO356_29040 at 6750.362 kb on + strand, within AO356_29040 at 6750.362 kb on + strand, within AO356_29040 at 6750.362 kb on + strand, within AO356_29040 at 6750.363 kb on - strand, within AO356_29040 at 6750.434 kb on + strand, within AO356_29040 at 6750.434 kb on + strand, within AO356_29040 at 6750.434 kb on + strand, within AO356_29040 at 6750.435 kb on - strand, within AO356_29040 at 6750.435 kb on - strand, within AO356_29040 at 6750.435 kb on - strand, within AO356_29040 at 6750.435 kb on - strand, within AO356_29040 at 6750.439 kb on - strand, within AO356_29040 at 6750.456 kb on + strand, within AO356_29040 at 6750.456 kb on + strand, within AO356_29040 at 6750.456 kb on + strand, within AO356_29040 at 6750.456 kb on + strand, within AO356_29040 at 6750.535 kb on - strand, within AO356_29040 at 6750.774 kb on + strand, within AO356_29040 at 6750.774 kb on + strand, within AO356_29040 at 6750.909 kb on + strand, within AO356_29040 at 6750.909 kb on + strand, within AO356_29040 at 6750.909 kb on + strand, within AO356_29040 at 6750.910 kb on - strand, within AO356_29040 at 6751.092 kb on + strand at 6751.092 kb on + strand at 6751.171 kb on + strand at 6751.171 kb on + strand at 6751.172 kb on - strand at 6751.172 kb on - strand at 6751.180 kb on + strand at 6751.181 kb on - strand at 6751.395 kb on + strand at 6751.395 kb on + strand at 6751.396 kb on - strand at 6751.396 kb on - strand at 6751.508 kb on - strand at 6751.985 kb on + strand at 6751.985 kb on + strand at 6752.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 6,749,148 + AO356_29035 0.42 -1.0 6,749,222 + AO356_29035 0.48 -0.7 6,749,442 - AO356_29035 0.66 +0.6 6,749,603 + AO356_29035 0.79 -1.2 6,749,604 - AO356_29035 0.79 -0.3 6,750,084 + AO356_29040 0.13 +1.5 6,750,094 + AO356_29040 0.14 -0.2 6,750,095 - AO356_29040 0.14 +0.9 6,750,145 - AO356_29040 0.18 -0.3 6,750,298 - AO356_29040 0.30 +0.1 6,750,362 + AO356_29040 0.35 +0.9 6,750,362 + AO356_29040 0.35 +1.7 6,750,362 + AO356_29040 0.35 -0.1 6,750,363 - AO356_29040 0.35 +0.3 6,750,434 + AO356_29040 0.41 -0.3 6,750,434 + AO356_29040 0.41 -0.2 6,750,434 + AO356_29040 0.41 -0.1 6,750,435 - AO356_29040 0.41 -1.2 6,750,435 - AO356_29040 0.41 -0.0 6,750,435 - AO356_29040 0.41 +1.0 6,750,435 - AO356_29040 0.41 +0.2 6,750,439 - AO356_29040 0.41 +0.4 6,750,456 + AO356_29040 0.42 -0.0 6,750,456 + AO356_29040 0.42 +0.2 6,750,456 + AO356_29040 0.42 -0.1 6,750,456 + AO356_29040 0.42 +0.1 6,750,535 - AO356_29040 0.49 +0.4 6,750,774 + AO356_29040 0.67 +0.1 6,750,774 + AO356_29040 0.67 +0.3 6,750,909 + AO356_29040 0.78 +0.3 6,750,909 + AO356_29040 0.78 +0.5 6,750,909 + AO356_29040 0.78 +0.8 6,750,910 - AO356_29040 0.78 +0.1 6,751,092 + +0.5 6,751,092 + -1.3 6,751,171 + +0.2 6,751,171 + -0.1 6,751,172 - -0.5 6,751,172 - +0.3 6,751,180 + +0.1 6,751,181 - +0.9 6,751,395 + -0.8 6,751,395 + +0.8 6,751,396 - +0.0 6,751,396 - -0.6 6,751,508 - +0.1 6,751,985 + -0.7 6,751,985 + -0.6 6,752,001 - -0.1
Or see this region's nucleotide sequence