Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25315 and AO356_25320 overlap by 29 nucleotides AO356_25320 and AO356_25325 overlap by 4 nucleotides
AO356_25315: AO356_25315 - cyclopropane-fatty-acyl-phospholipid synthase, at 5,728,132 to 5,729,394
_25315
AO356_25320: AO356_25320 - hypothetical protein, at 5,729,366 to 5,730,181
_25320
AO356_25325: AO356_25325 - FAD-dependent oxidoreductase, at 5,730,178 to 5,731,425
_25325
Position (kb)
5729
5730
5731 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5728.563 kb on - strand, within AO356_25315 at 5728.622 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.754 kb on + strand, within AO356_25315 at 5728.755 kb on - strand, within AO356_25315 at 5728.913 kb on + strand, within AO356_25315 at 5728.965 kb on - strand, within AO356_25315 at 5728.965 kb on - strand, within AO356_25315 at 5728.977 kb on + strand, within AO356_25315 at 5728.977 kb on + strand, within AO356_25315 at 5729.147 kb on + strand, within AO356_25315 at 5729.147 kb on + strand, within AO356_25315 at 5729.147 kb on + strand, within AO356_25315 at 5729.147 kb on + strand, within AO356_25315 at 5729.147 kb on + strand, within AO356_25315 at 5729.148 kb on - strand, within AO356_25315 at 5729.148 kb on - strand, within AO356_25315 at 5729.148 kb on - strand, within AO356_25315 at 5729.148 kb on - strand, within AO356_25315 at 5729.148 kb on - strand, within AO356_25315 at 5729.425 kb on + strand at 5729.499 kb on + strand, within AO356_25320 at 5729.499 kb on + strand, within AO356_25320 at 5729.679 kb on + strand, within AO356_25320 at 5729.769 kb on + strand, within AO356_25320 at 5729.769 kb on + strand, within AO356_25320 at 5729.769 kb on + strand, within AO356_25320 at 5729.770 kb on - strand, within AO356_25320 at 5729.770 kb on - strand, within AO356_25320 at 5729.770 kb on - strand, within AO356_25320 at 5729.794 kb on + strand, within AO356_25320 at 5729.794 kb on + strand, within AO356_25320 at 5729.794 kb on + strand, within AO356_25320 at 5729.795 kb on - strand, within AO356_25320 at 5729.797 kb on + strand, within AO356_25320 at 5729.797 kb on + strand, within AO356_25320 at 5730.093 kb on + strand, within AO356_25320 at 5730.269 kb on + strand at 5730.269 kb on + strand at 5730.270 kb on - strand at 5730.270 kb on - strand at 5730.333 kb on - strand, within AO356_25325 at 5730.333 kb on - strand, within AO356_25325 at 5730.452 kb on + strand, within AO356_25325 at 5730.453 kb on - strand, within AO356_25325 at 5730.453 kb on - strand, within AO356_25325 at 5730.494 kb on + strand, within AO356_25325 at 5730.494 kb on + strand, within AO356_25325 at 5730.783 kb on + strand, within AO356_25325 at 5730.783 kb on + strand, within AO356_25325 at 5730.784 kb on - strand, within AO356_25325 at 5730.784 kb on - strand, within AO356_25325 at 5730.784 kb on - strand, within AO356_25325 at 5730.784 kb on - strand, within AO356_25325 at 5730.784 kb on - strand, within AO356_25325 at 5730.785 kb on + strand, within AO356_25325 at 5730.786 kb on - strand, within AO356_25325 at 5730.930 kb on + strand, within AO356_25325 at 5730.930 kb on + strand, within AO356_25325 at 5730.931 kb on - strand, within AO356_25325 at 5730.941 kb on + strand, within AO356_25325 at 5730.941 kb on + strand, within AO356_25325 at 5730.942 kb on - strand, within AO356_25325 at 5730.942 kb on - strand, within AO356_25325 at 5730.983 kb on + strand, within AO356_25325 at 5730.984 kb on - strand, within AO356_25325 at 5731.139 kb on + strand, within AO356_25325 at 5731.140 kb on - strand, within AO356_25325 at 5731.140 kb on - strand, within AO356_25325 at 5731.140 kb on - strand, within AO356_25325
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 5,728,563 - AO356_25315 0.34 -0.5 5,728,622 + AO356_25315 0.39 +0.8 5,728,754 + AO356_25315 0.49 -0.1 5,728,754 + AO356_25315 0.49 -0.3 5,728,754 + AO356_25315 0.49 +0.4 5,728,754 + AO356_25315 0.49 +0.8 5,728,754 + AO356_25315 0.49 -0.9 5,728,754 + AO356_25315 0.49 +0.4 5,728,754 + AO356_25315 0.49 -0.1 5,728,755 - AO356_25315 0.49 +0.5 5,728,913 + AO356_25315 0.62 -1.9 5,728,965 - AO356_25315 0.66 +0.2 5,728,965 - AO356_25315 0.66 -0.2 5,728,977 + AO356_25315 0.67 +1.2 5,728,977 + AO356_25315 0.67 +1.0 5,729,147 + AO356_25315 0.80 -0.4 5,729,147 + AO356_25315 0.80 -0.0 5,729,147 + AO356_25315 0.80 -0.4 5,729,147 + AO356_25315 0.80 -0.4 5,729,147 + AO356_25315 0.80 -2.1 5,729,148 - AO356_25315 0.80 +0.2 5,729,148 - AO356_25315 0.80 +1.0 5,729,148 - AO356_25315 0.80 +0.5 5,729,148 - AO356_25315 0.80 +0.6 5,729,148 - AO356_25315 0.80 +0.1 5,729,425 + +0.4 5,729,499 + AO356_25320 0.16 +0.5 5,729,499 + AO356_25320 0.16 +0.3 5,729,679 + AO356_25320 0.38 -0.1 5,729,769 + AO356_25320 0.49 +1.8 5,729,769 + AO356_25320 0.49 -0.4 5,729,769 + AO356_25320 0.49 +1.0 5,729,770 - AO356_25320 0.50 +0.4 5,729,770 - AO356_25320 0.50 +0.3 5,729,770 - AO356_25320 0.50 -0.1 5,729,794 + AO356_25320 0.52 -0.4 5,729,794 + AO356_25320 0.52 +1.2 5,729,794 + AO356_25320 0.52 -0.1 5,729,795 - AO356_25320 0.53 +0.8 5,729,797 + AO356_25320 0.53 +0.4 5,729,797 + AO356_25320 0.53 +0.1 5,730,093 + AO356_25320 0.89 -1.0 5,730,269 + -0.8 5,730,269 + +0.6 5,730,270 - +0.8 5,730,270 - -1.1 5,730,333 - AO356_25325 0.12 -0.6 5,730,333 - AO356_25325 0.12 +0.6 5,730,452 + AO356_25325 0.22 +0.8 5,730,453 - AO356_25325 0.22 -0.7 5,730,453 - AO356_25325 0.22 -1.4 5,730,494 + AO356_25325 0.25 -0.2 5,730,494 + AO356_25325 0.25 -0.6 5,730,783 + AO356_25325 0.48 +0.6 5,730,783 + AO356_25325 0.48 -0.4 5,730,784 - AO356_25325 0.49 +0.2 5,730,784 - AO356_25325 0.49 -0.0 5,730,784 - AO356_25325 0.49 +0.8 5,730,784 - AO356_25325 0.49 -0.2 5,730,784 - AO356_25325 0.49 +0.9 5,730,785 + AO356_25325 0.49 -0.3 5,730,786 - AO356_25325 0.49 -0.5 5,730,930 + AO356_25325 0.60 -0.2 5,730,930 + AO356_25325 0.60 +1.9 5,730,931 - AO356_25325 0.60 +0.4 5,730,941 + AO356_25325 0.61 +0.7 5,730,941 + AO356_25325 0.61 -0.2 5,730,942 - AO356_25325 0.61 +0.9 5,730,942 - AO356_25325 0.61 +0.6 5,730,983 + AO356_25325 0.65 +0.6 5,730,984 - AO356_25325 0.65 -0.9 5,731,139 + AO356_25325 0.77 +0.4 5,731,140 - AO356_25325 0.77 +1.7 5,731,140 - AO356_25325 0.77 -2.1 5,731,140 - AO356_25325 0.77 -0.5
Or see this region's nucleotide sequence