Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3960

Experiment: LB, pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, pH7
4,073,931	+				-0.0
4,073,934	+				+0.3
4,073,934	+				-0.2
4,073,935	-				+1.3
4,074,122	+		Ga0059261_3959	0.40	-0.8
4,074,122	+		Ga0059261_3959	0.40	+0.1
4,074,123	-		Ga0059261_3959	0.41	-0.5
4,074,123	-		Ga0059261_3959	0.41	-0.2
4,074,312	+				+1.1
4,074,312	+				-0.9
4,074,313	-				-0.2
4,074,313	-				-0.0
4,074,343	+				-1.4
4,074,343	+				-0.2
4,074,343	+				-0.0
4,074,343	+				-0.0
4,074,344	-				+0.4
4,074,344	-				+0.4
4,074,344	-				+0.5
4,074,344	-				+0.1
4,074,344	-				+0.5
4,074,344	-				+0.4
4,074,379	-				+0.4
4,074,425	-				+0.3
4,074,425	-				+0.3
4,074,425	-				-0.5
4,074,537	+				-1.0
4,074,537	+				-0.6
4,074,538	-				-0.2
4,074,538	-				-0.5
4,074,538	-				-0.4
4,074,538	-				-0.0
4,074,551	-				+1.1
4,074,567	+				-1.9
4,074,605	+				-1.4
4,074,605	+				+0.4
4,074,605	+				-1.0
4,074,605	+				-0.3
4,074,605	+				-0.9
4,074,605	+				-0.6
4,074,605	+				-0.9
4,074,605	+				+0.8
4,074,605	+				-1.3
4,074,606	-				-0.5
4,074,606	-				+0.1
4,074,606	-				+0.2
4,074,606	-				-0.5
4,074,606	-				-0.4
4,074,606	-				-0.4
4,074,606	-				-2.0
4,074,606	-				+0.1
4,074,606	-				-1.4
4,074,606	-				-0.9
4,074,606	-				-0.4
4,074,606	-				+2.0
4,074,708	+				-0.1
4,074,709	-				+0.8
4,074,770	+				+0.1
4,074,770	+				-0.1
4,074,770	+				-0.4
4,074,770	+				-0.2
4,074,771	-				+0.3
4,074,772	+				-0.3
4,074,773	-				-1.6
4,074,782	+				+0.1
4,074,782	+				+0.3
4,074,782	+				-0.8
4,074,783	-				-0.2
4,074,783	-				-0.5
4,074,783	-				-2.2
4,074,810	+				-0.5
4,074,811	-				+0.5
4,074,811	-				+0.0
4,074,811	-				-1.2
4,074,857	+				+0.9
4,074,857	+				-0.1
4,074,857	+				-1.1
4,074,857	+				-0.9
4,074,858	-				+0.3
4,074,858	-				-0.2
4,074,858	-				-0.9
4,074,858	-				+0.3
4,074,858	-				-1.3
4,074,858	-				-0.8
4,074,858	-				+0.9
4,074,901	+				-0.3
4,074,902	-				-0.1
4,074,910	+				-0.1
4,074,910	+				-0.2
4,074,910	+				+0.3
4,074,910	+				-1.3
4,075,028	+		Ga0059261_3960	0.25	+0.8
4,075,028	+		Ga0059261_3960	0.25	-0.6
4,075,028	+		Ga0059261_3960	0.25	-0.4
4,075,028	+		Ga0059261_3960	0.25	-0.6
4,075,028	+				-0.1
4,075,028	+		Ga0059261_3960	0.25	-0.6
4,075,029	-		Ga0059261_3960	0.25	-0.1
4,075,029	-		Ga0059261_3960	0.25	+0.2
4,075,029	-		Ga0059261_3960	0.25	+0.4
4,075,029	-		Ga0059261_3960	0.25	-0.5
4,075,032	-		Ga0059261_3960	0.25	+0.6
4,075,052	+		Ga0059261_3960	0.28	-0.9
4,075,052	+		Ga0059261_3960	0.28	-0.4
4,075,052	+		Ga0059261_3960	0.28	-0.3
4,075,052	+				+0.9
4,075,053	-		Ga0059261_3960	0.28	+0.5
4,075,053	-		Ga0059261_3960	0.28	-0.8
4,075,069	+		Ga0059261_3960	0.30	-1.5
4,075,069	+		Ga0059261_3960	0.30	-0.1
4,075,069	+		Ga0059261_3960	0.30	-0.6
4,075,069	+		Ga0059261_3960	0.30	-0.3
4,075,069	+		Ga0059261_3960	0.30	-1.9
4,075,070	-		Ga0059261_3960	0.30	+1.1
4,075,070	-		Ga0059261_3960	0.30	-0.4
4,075,070	-		Ga0059261_3960	0.30	+0.2
4,075,070	-		Ga0059261_3960	0.30	+0.2
4,075,070	-		Ga0059261_3960	0.30	+0.7
4,075,127	+		Ga0059261_3960	0.38	-0.4
4,075,127	+		Ga0059261_3960	0.38	+0.7
4,075,127	+		Ga0059261_3960	0.38	+0.5
4,075,127	+		Ga0059261_3960	0.38	-0.4
4,075,127	+		Ga0059261_3960	0.38	-0.3
4,075,127	+		Ga0059261_3960	0.38	-0.3
4,075,127	+		Ga0059261_3960	0.38	-1.1
4,075,127	+		Ga0059261_3960	0.38	-0.1
4,075,128	-		Ga0059261_3960	0.38	+0.3
4,075,128	-		Ga0059261_3960	0.38	+0.3
4,075,128	-		Ga0059261_3960	0.38	-2.4
4,075,128	-		Ga0059261_3960	0.38	-1.4
4,075,128	-				+0.9
4,075,128	-		Ga0059261_3960	0.38	-0.8
4,075,128	-		Ga0059261_3960	0.38	+0.1
4,075,128	-		Ga0059261_3960	0.38	-0.4
4,075,128	-		Ga0059261_3960	0.38	-0.6
4,075,128	-		Ga0059261_3960	0.38	-1.5
4,075,145	+		Ga0059261_3960	0.40	-0.1
4,075,145	+		Ga0059261_3960	0.40	-0.9
4,075,145	+		Ga0059261_3960	0.40	-0.1
4,075,145	+		Ga0059261_3960	0.40	+0.9
4,075,146	-		Ga0059261_3960	0.41	+0.9
4,075,146	-		Ga0059261_3960	0.41	-0.5
4,075,146	-		Ga0059261_3960	0.41	+0.1
4,075,146	-		Ga0059261_3960	0.41	-0.1
4,075,146	-		Ga0059261_3960	0.41	-0.7
4,075,150	+		Ga0059261_3960	0.41	+0.3
4,075,150	+		Ga0059261_3960	0.41	-0.8
4,075,198	+		Ga0059261_3960	0.48	-0.2
4,075,199	-		Ga0059261_3960	0.48	-0.3
4,075,246	+		Ga0059261_3960	0.54	-2.6
4,075,247	-		Ga0059261_3960	0.54	-1.9
4,075,277	+		Ga0059261_3960	0.58	-2.1
4,075,277	+		Ga0059261_3960	0.58	+0.5
4,075,277	+		Ga0059261_3960	0.58	+0.1
4,075,277	+		Ga0059261_3960	0.58	-1.1
4,075,277	+		Ga0059261_3960	0.58	+0.6
4,075,277	+		Ga0059261_3960	0.58	-0.1
4,075,277	+		Ga0059261_3960	0.58	+0.3
4,075,278	-		Ga0059261_3960	0.58	-0.3
4,075,278	-		Ga0059261_3960	0.58	+0.2
4,075,278	-		Ga0059261_3960	0.58	+0.5
4,075,278	-		Ga0059261_3960	0.58	-0.7
4,075,278	-		Ga0059261_3960	0.58	+0.9
4,075,278	-		Ga0059261_3960	0.58	-0.6
4,075,278	-		Ga0059261_3960	0.58	-0.9
4,075,278	-		Ga0059261_3960	0.58	-0.3
4,075,279	+		Ga0059261_3960	0.59	+0.5
4,075,279	+		Ga0059261_3960	0.59	+0.5
4,075,279	+		Ga0059261_3960	0.59	+0.2
4,075,279	+		Ga0059261_3960	0.59	+0.7
4,075,279	+		Ga0059261_3960	0.59	-0.5
4,075,279	+		Ga0059261_3960	0.59	+0.2
4,075,279	+		Ga0059261_3960	0.59	+0.0
4,075,279	+		Ga0059261_3960	0.59	-0.6
4,075,279	+		Ga0059261_3960	0.59	-0.2
4,075,279	+		Ga0059261_3960	0.59	+0.2
4,075,279	+		Ga0059261_3960	0.59	-0.6
4,075,279	+		Ga0059261_3960	0.59	+0.4
4,075,279	+		Ga0059261_3960	0.59	-0.7
4,075,279	+		Ga0059261_3960	0.59	+0.3
4,075,279	+		Ga0059261_3960	0.59	-0.1
4,075,280	-		Ga0059261_3960	0.59	-0.1
4,075,280	-		Ga0059261_3960	0.59	+0.9
4,075,280	-		Ga0059261_3960	0.59	+0.7
4,075,280	-		Ga0059261_3960	0.59	+0.9
4,075,280	-				-0.1
4,075,280	-		Ga0059261_3960	0.59	-0.1
4,075,280	-		Ga0059261_3960	0.59	-0.2
4,075,280	-		Ga0059261_3960	0.59	-2.1
4,075,329	+		Ga0059261_3960	0.65	+0.9
4,075,331	+		Ga0059261_3960	0.66	+0.8
4,075,331	+		Ga0059261_3960	0.66	-0.5
4,075,331	+		Ga0059261_3960	0.66	-0.5
4,075,331	+		Ga0059261_3960	0.66	+0.1
4,075,331	+		Ga0059261_3960	0.66	-0.4
4,075,331	+		Ga0059261_3960	0.66	-0.3
4,075,331	+		Ga0059261_3960	0.66	-0.5
4,075,331	+		Ga0059261_3960	0.66	-0.8
4,075,332	-		Ga0059261_3960	0.66	-0.1
4,075,332	-		Ga0059261_3960	0.66	+2.8
4,075,332	-		Ga0059261_3960	0.66	-1.1
4,075,332	-		Ga0059261_3960	0.66	-0.7
4,075,332	-		Ga0059261_3960	0.66	-0.4
4,075,332	-		Ga0059261_3960	0.66	+0.5
4,075,332	-		Ga0059261_3960	0.66	+0.5
4,075,332	-		Ga0059261_3960	0.66	+0.0
4,075,332	-		Ga0059261_3960	0.66	-1.4
4,075,332	-		Ga0059261_3960	0.66	-0.1
4,075,332	-		Ga0059261_3960	0.66	-0.1
4,075,332	-		Ga0059261_3960	0.66	-0.6
4,075,358	-		Ga0059261_3960	0.69	+0.6
4,075,364	+		Ga0059261_3960	0.70	+0.4
4,075,364	+		Ga0059261_3960	0.70	+0.3
4,075,365	-		Ga0059261_3960	0.70	-0.5
4,075,365	-		Ga0059261_3960	0.70	+0.9
4,075,450	+		Ga0059261_3960	0.82	-0.7
4,075,451	-				-0.6
4,075,451	-		Ga0059261_3960	0.82	+0.4
4,075,583	+				-1.6
4,075,583	+				-0.3
4,075,583	+				-0.2
4,075,584	-				-0.5
4,075,647	+				-0.5
4,075,647	+				+0.8
4,075,648	-				-0.8
4,075,673	+				+1.9
4,075,674	-				-1.1
4,075,730	+				+0.4
4,075,731	-				+0.9
4,075,731	-				+0.5
4,075,731	-				-0.8
4,075,731	-				-0.2
4,075,851	-		Ga0059261_3961	0.11	+0.0
4,076,295	+		Ga0059261_3961	0.37	-0.3
4,076,296	-		Ga0059261_3961	0.37	+1.0
4,076,296	-		Ga0059261_3961	0.37	+0.1
4,076,297	+		Ga0059261_3961	0.37	+0.2
4,076,297	+				-0.6
4,076,297	+		Ga0059261_3961	0.37	-0.1
4,076,297	+		Ga0059261_3961	0.37	-0.3
4,076,297	+		Ga0059261_3961	0.37	-0.3
4,076,297	+		Ga0059261_3961	0.37	-0.1
4,076,297	+		Ga0059261_3961	0.37	+0.4
4,076,297	+		Ga0059261_3961	0.37	+0.8
4,076,298	-		Ga0059261_3961	0.37	-1.8
4,076,298	-		Ga0059261_3961	0.37	+0.5
4,076,298	-		Ga0059261_3961	0.37	+0.5
4,076,298	-				-0.1
4,076,298	-		Ga0059261_3961	0.37	-0.6
4,076,298	-		Ga0059261_3961	0.37	-0.9
4,076,375	+		Ga0059261_3961	0.42	+0.9
4,076,522	+		Ga0059261_3961	0.51	-1.1