Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_13595

Experiment: LB_0.5%bileacids_aerobic_18HR_ZN19A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB_0.5%bileacids_aerobic_18HR_ZN19A
2,890,935	+		CSW01_13585	0.79	+0.4
2,890,940	+		CSW01_13585	0.80	+0.2
2,890,948	-		CSW01_13585	0.82	+0.2
2,890,950	+		CSW01_13585	0.82	+0.6
2,890,950	+		CSW01_13585	0.82	+0.3
2,890,953	-		CSW01_13585	0.83	-0.8
2,890,958	-		CSW01_13585	0.84	+0.7
2,890,958	-		CSW01_13585	0.84	+0.2
2,890,960	+		CSW01_13585	0.84	+0.3
2,890,960	+		CSW01_13585	0.84	-0.5
2,890,960	+		CSW01_13585	0.84	+0.8
2,890,960	+		CSW01_13585	0.84	+0.5
2,890,965	+		CSW01_13585	0.85	-0.1
2,890,968	-		CSW01_13585	0.86	+0.7
2,890,968	-		CSW01_13585	0.86	+1.5
2,890,968	-		CSW01_13585	0.86	-0.2
2,890,968	-		CSW01_13585	0.86	+0.6
2,890,968	-		CSW01_13585	0.86	-0.6
2,890,968	-		CSW01_13585	0.86	+0.2
2,890,968	-		CSW01_13585	0.86	+0.1
2,890,968	-		CSW01_13585	0.86	-1.0
2,891,056	-				-0.0
2,891,078	-				-0.6
2,891,080	+				+2.2
2,891,080	+				-0.8
2,891,080	+				+0.2
2,891,088	-				-0.4
2,891,088	-				-0.3
2,891,101	+				+0.1
2,891,109	-				-0.5
2,891,126	+				-0.2
2,891,126	+				+0.1
2,891,134	-				+0.5
2,891,136	+				+0.6
2,891,161	-				+0.4
2,891,161	-				-0.5
2,891,192	+				+0.3
2,891,193	+				+2.4
2,891,217	-				+1.5
2,891,224	+				+1.4
2,891,260	+				+0.2
2,891,292	-				+0.5
2,891,371	-		CSW01_13590	0.21	+0.8
2,891,387	+		CSW01_13590	0.23	+0.1
2,891,388	+		CSW01_13590	0.23	+0.3
2,891,390	-		CSW01_13590	0.24	+0.1
2,891,394	+		CSW01_13590	0.24	-0.3
2,891,394	+		CSW01_13590	0.24	+0.2
2,891,395	-		CSW01_13590	0.24	+0.2
2,891,395	-		CSW01_13590	0.24	+1.0
2,891,402	-		CSW01_13590	0.25	-0.3
2,891,402	-		CSW01_13590	0.25	-0.3
2,891,402	-		CSW01_13590	0.25	-0.8
2,891,402	-		CSW01_13590	0.25	+3.3
2,891,402	-		CSW01_13590	0.25	+0.1
2,891,402	-		CSW01_13590	0.25	-0.0
2,891,418	-		CSW01_13590	0.28	+0.3
2,891,420	-		CSW01_13590	0.28	+0.2
2,891,484	+		CSW01_13590	0.37	+0.2
2,891,492	+		CSW01_13590	0.39	-0.1
2,891,492	+		CSW01_13590	0.39	+0.3
2,891,500	-		CSW01_13590	0.40	+0.4
2,891,500	-		CSW01_13590	0.40	-0.2
2,891,500	-		CSW01_13590	0.40	+0.2
2,891,500	-		CSW01_13590	0.40	+0.2
2,891,520	+		CSW01_13590	0.43	-0.3
2,891,536	-		CSW01_13590	0.45	-0.3
2,891,566	+		CSW01_13590	0.49	+0.5
2,891,611	+		CSW01_13590	0.56	+0.6
2,891,642	-		CSW01_13590	0.60	-0.2
2,891,664	-		CSW01_13590	0.64	+0.8
2,891,698	-		CSW01_13590	0.69	+0.5
2,891,735	-		CSW01_13590	0.74	+0.3
2,891,737	+		CSW01_13590	0.74	-0.6
2,891,737	+		CSW01_13590	0.74	+0.0
2,891,737	+		CSW01_13590	0.74	+1.2
2,891,740	-		CSW01_13590	0.75	+1.2
2,891,745	-		CSW01_13590	0.75	+0.3
2,891,745	-		CSW01_13590	0.75	-0.0
2,891,745	-		CSW01_13590	0.75	-0.1
2,891,745	-		CSW01_13590	0.75	+0.4
2,891,745	-		CSW01_13590	0.75	-1.2
2,891,755	-		CSW01_13590	0.77	+1.0
2,891,759	+		CSW01_13590	0.77	-0.2
2,891,759	+		CSW01_13590	0.77	+0.4
2,891,759	+		CSW01_13590	0.77	+0.4
2,891,759	+		CSW01_13590	0.77	+0.3
2,891,759	+		CSW01_13590	0.77	-0.1
2,891,759	+		CSW01_13590	0.77	+1.1
2,891,759	+		CSW01_13590	0.77	+0.8
2,891,759	+		CSW01_13590	0.77	+0.4
2,891,767	-		CSW01_13590	0.79	-1.2
2,891,767	-		CSW01_13590	0.79	+0.0
2,891,767	-		CSW01_13590	0.79	+0.6
2,891,767	-		CSW01_13590	0.79	+0.1
2,891,767	-		CSW01_13590	0.79	+0.9
2,891,767	-		CSW01_13590	0.79	-0.3
2,891,767	-		CSW01_13590	0.79	+1.4
2,891,767	-		CSW01_13590	0.79	+1.4
2,891,767	-		CSW01_13590	0.79	-0.1
2,891,767	-		CSW01_13590	0.79	+0.6
2,891,767	-		CSW01_13590	0.79	-1.2
2,891,767	-		CSW01_13590	0.79	+0.0
2,891,767	-		CSW01_13590	0.79	-0.1
2,891,807	+		CSW01_13590	0.84	+0.2
2,891,815	-		CSW01_13590	0.86	+0.9
2,891,816	+		CSW01_13590	0.86	+0.5
2,891,816	+		CSW01_13590	0.86	+1.2
2,891,816	+		CSW01_13590	0.86	+1.2
2,891,816	+		CSW01_13590	0.86	+0.5
2,891,816	+		CSW01_13590	0.86	+0.0
2,891,816	+		CSW01_13590	0.86	+0.6
2,891,816	+		CSW01_13590	0.86	-0.1
2,891,816	+		CSW01_13590	0.86	-0.3
2,891,816	+		CSW01_13590	0.86	-0.1
2,891,816	+		CSW01_13590	0.86	+1.0
2,891,816	+		CSW01_13590	0.86	+0.8
2,891,816	+		CSW01_13590	0.86	+0.5
2,891,816	+		CSW01_13590	0.86	+0.1
2,891,816	+		CSW01_13590	0.86	-0.6
2,891,816	+		CSW01_13590	0.86	+0.5
2,891,816	+		CSW01_13590	0.86	-0.1
2,891,816	+		CSW01_13590	0.86	+0.0
2,891,816	+		CSW01_13590	0.86	+0.1
2,891,816	+		CSW01_13590	0.86	-0.8
2,891,816	+		CSW01_13590	0.86	+0.5
2,891,816	+		CSW01_13590	0.86	+0.0
2,891,816	+		CSW01_13590	0.86	+0.3
2,891,816	+		CSW01_13590	0.86	+0.3
2,891,816	+		CSW01_13590	0.86	+0.5
2,891,816	+		CSW01_13590	0.86	-0.5
2,891,816	+		CSW01_13590	0.86	-0.7
2,891,816	+		CSW01_13590	0.86	-0.0
2,891,816	+		CSW01_13590	0.86	+0.1
2,891,816	+		CSW01_13590	0.86	-1.7
2,891,817	+		CSW01_13590	0.86	+0.2
2,891,824	-		CSW01_13590	0.87	+0.2
2,891,824	-		CSW01_13590	0.87	-0.0
2,891,824	-		CSW01_13590	0.87	-0.5
2,891,824	-		CSW01_13590	0.87	-0.0
2,891,824	-		CSW01_13590	0.87	+0.3
2,891,824	-		CSW01_13590	0.87	-0.4
2,891,824	-		CSW01_13590	0.87	+1.6
2,891,824	-		CSW01_13590	0.87	+0.2
2,891,824	-		CSW01_13590	0.87	+0.1
2,891,824	-		CSW01_13590	0.87	-0.0
2,891,824	-		CSW01_13590	0.87	-1.4
2,891,824	-		CSW01_13590	0.87	-0.3
2,891,824	-		CSW01_13590	0.87	+0.8
2,891,824	-		CSW01_13590	0.87	+1.5
2,891,824	-		CSW01_13590	0.87	+0.7
2,891,824	-		CSW01_13590	0.87	-0.2
2,891,824	-		CSW01_13590	0.87	-0.2
2,891,824	-		CSW01_13590	0.87	+0.7
2,891,824	-		CSW01_13590	0.87	-0.5
2,891,824	-		CSW01_13590	0.87	+0.2
2,891,824	-		CSW01_13590	0.87	+0.3
2,891,824	-		CSW01_13590	0.87	+0.0
2,891,824	-		CSW01_13590	0.87	+0.6
2,891,824	-		CSW01_13590	0.87	+0.1
2,891,865	+				+1.1
2,891,865	+				-0.6
2,891,865	+				+0.3
2,891,865	+				+0.3
2,891,865	+				-0.2
2,891,865	+				+0.3
2,891,873	-				+1.1
2,891,891	+				-0.0
2,891,899	-				+0.2
2,891,899	-				+1.3
2,891,987	-				+0.3
2,892,000	+				+0.2
2,892,000	+				+0.8
2,892,008	-				+0.2
2,892,008	-				+0.3
2,892,008	-				+0.0
2,892,011	+				-0.8
2,892,016	+				-0.1
2,892,016	+				-0.2
2,892,024	-				-1.2
2,892,025	+				+0.2
2,892,093	-		CSW01_13595	0.13	+0.3
2,892,124	-		CSW01_13595	0.15	-0.8
2,892,152	-		CSW01_13595	0.17	+0.1
2,892,223	+		CSW01_13595	0.22	+0.1
2,892,223	+		CSW01_13595	0.22	-0.3
2,892,223	+		CSW01_13595	0.22	+0.4
2,892,223	+		CSW01_13595	0.22	-0.2
2,892,223	+		CSW01_13595	0.22	-1.2
2,892,231	-		CSW01_13595	0.23	+0.8
2,892,231	-		CSW01_13595	0.23	-0.6
2,892,263	-		CSW01_13595	0.25	+0.1
2,892,321	-		CSW01_13595	0.29	+0.6
2,892,339	-		CSW01_13595	0.31	-0.6
2,892,376	-		CSW01_13595	0.33	-0.2
2,892,376	-		CSW01_13595	0.33	-0.8
2,892,396	-		CSW01_13595	0.35	-1.0
2,892,422	+		CSW01_13595	0.36	-0.8
2,892,458	+		CSW01_13595	0.39	-0.1
2,892,466	-		CSW01_13595	0.40	-0.0
2,892,466	-		CSW01_13595	0.40	-0.7
2,892,466	-		CSW01_13595	0.40	-0.8
2,892,466	-		CSW01_13595	0.40	+0.5
2,892,471	+		CSW01_13595	0.40	-0.1
2,892,486	+		CSW01_13595	0.41	+0.3
2,892,487	+		CSW01_13595	0.41	-0.4
2,892,497	+		CSW01_13595	0.42	-0.2
2,892,500	-		CSW01_13595	0.42	+0.1
2,892,500	-		CSW01_13595	0.42	+0.2
2,892,610	+		CSW01_13595	0.50	+0.0
2,892,610	+		CSW01_13595	0.50	-0.4
2,892,610	+		CSW01_13595	0.50	+0.9
2,892,610	+		CSW01_13595	0.50	+1.1
2,892,610	+		CSW01_13595	0.50	-0.0
2,892,610	+		CSW01_13595	0.50	-0.3
2,892,610	+		CSW01_13595	0.50	-0.9
2,892,610	+		CSW01_13595	0.50	-0.5
2,892,610	+		CSW01_13595	0.50	+0.3
2,892,610	+		CSW01_13595	0.50	+0.8
2,892,610	+		CSW01_13595	0.50	+0.1
2,892,610	+		CSW01_13595	0.50	+0.2
2,892,610	+		CSW01_13595	0.50	+1.4
2,892,618	-		CSW01_13595	0.51	+0.5
2,892,618	-		CSW01_13595	0.51	+0.3
2,892,618	-		CSW01_13595	0.51	+0.7
2,892,618	-		CSW01_13595	0.51	+0.3
2,892,618	-		CSW01_13595	0.51	+1.3
2,892,618	-		CSW01_13595	0.51	+0.6
2,892,618	-		CSW01_13595	0.51	+2.1
2,892,618	-		CSW01_13595	0.51	+0.2
2,892,618	-		CSW01_13595	0.51	-0.7
2,892,618	-		CSW01_13595	0.51	+0.8
2,892,618	-		CSW01_13595	0.51	+0.2
2,892,654	-		CSW01_13595	0.53	+0.4
2,892,775	-		CSW01_13595	0.62	+1.2
2,892,780	+		CSW01_13595	0.62	+1.6
2,892,780	+		CSW01_13595	0.62	+1.1
2,892,780	-		CSW01_13595	0.62	-0.8
2,892,787	+		CSW01_13595	0.63	-0.1
2,892,787	+		CSW01_13595	0.63	+0.1
2,892,787	+		CSW01_13595	0.63	-0.8
2,892,795	-		CSW01_13595	0.63	-0.3
2,892,795	-		CSW01_13595	0.63	+0.1
2,892,890	+		CSW01_13595	0.70	-0.1
2,892,890	+		CSW01_13595	0.70	+0.5
2,892,890	+		CSW01_13595	0.70	+0.5
2,892,898	-		CSW01_13595	0.71	+1.6
2,892,898	-		CSW01_13595	0.71	-0.4
2,892,905	+		CSW01_13595	0.71	+1.5
2,892,913	-		CSW01_13595	0.72	-0.5
2,892,945	-		CSW01_13595	0.74	+0.3
2,892,945	-		CSW01_13595	0.74	+0.2
2,893,043	-		CSW01_13595	0.81	-0.4
2,893,050	+		CSW01_13595	0.82	+0.2
2,893,050	+		CSW01_13595	0.82	-0.6
2,893,085	+		CSW01_13595	0.84	-1.4
2,893,104	+		CSW01_13595	0.85	+0.1
2,893,104	+		CSW01_13595	0.85	+0.2
2,893,104	+		CSW01_13595	0.85	-0.6
2,893,151	+		CSW01_13595	0.89	+1.1
2,893,151	+		CSW01_13595	0.89	-0.2
2,893,159	-		CSW01_13595	0.89	+0.2
2,893,159	-		CSW01_13595	0.89	+2.6
2,893,159	-		CSW01_13595	0.89	+0.5
2,893,175	-				-0.2
2,893,188	+				-0.3
2,893,188	+				-0.0
2,893,188	+				-0.1
2,893,194	+				+0.7
2,893,196	-				+0.5
2,893,196	-				-0.4
2,893,196	-				-0.8
2,893,221	+				-0.4
2,893,221	+				-0.4
2,893,229	-				+0.8
2,893,233	+				-0.1
2,893,241	-				+0.2
2,893,241	-				-1.0
2,893,243	+				+0.5
2,893,266	+				+0.3
2,893,267	+				-1.0
2,893,267	+				+0.4
2,893,284	+				-0.6
2,893,295	+				+0.3
2,893,411	-				-0.0
2,893,433	+				-0.2
2,893,463	+		CSW01_13600	0.11	-0.2
2,893,463	+		CSW01_13600	0.11	-0.5
2,893,463	+		CSW01_13600	0.11	+1.3
2,893,471	-		CSW01_13600	0.12	-0.8
2,893,471	-		CSW01_13600	0.12	-2.4
2,893,471	-		CSW01_13600	0.12	-0.6
2,893,616	+		CSW01_13600	0.34	-0.3
2,893,625	-		CSW01_13600	0.35	-0.8
2,893,647	-		CSW01_13600	0.39	-0.3
2,893,682	-		CSW01_13600	0.44	+0.3
2,893,685	-		CSW01_13600	0.44	-0.6
2,893,687	+		CSW01_13600	0.45	-0.3
2,893,687	+		CSW01_13600	0.45	-1.9
2,893,687	+		CSW01_13600	0.45	+0.1
2,893,687	+		CSW01_13600	0.45	+0.5
2,893,687	+		CSW01_13600	0.45	-0.1
2,893,687	+		CSW01_13600	0.45	-0.2
2,893,687	+		CSW01_13600	0.45	-0.7
2,893,694	+		CSW01_13600	0.46	+0.3
2,893,694	+		CSW01_13600	0.46	+0.3
2,893,695	-		CSW01_13600	0.46	-0.1
2,893,702	-		CSW01_13600	0.47	+1.1
2,893,708	-		CSW01_13600	0.48	+0.2
2,893,734	+		CSW01_13600	0.52	-0.7
2,893,764	-		CSW01_13600	0.56	-0.1
2,893,766	+		CSW01_13600	0.56	-0.3
2,893,766	+		CSW01_13600	0.56	-0.0
2,893,766	+		CSW01_13600	0.56	+0.8
2,893,766	+		CSW01_13600	0.56	+1.4
2,893,766	+		CSW01_13600	0.56	+0.1
2,893,766	+		CSW01_13600	0.56	+1.0
2,893,766	+		CSW01_13600	0.56	-0.9
2,893,766	+		CSW01_13600	0.56	+0.3
2,893,766	+		CSW01_13600	0.56	+1.0
2,893,766	+		CSW01_13600	0.56	+0.3
2,893,766	+		CSW01_13600	0.56	+0.7
2,893,766	+		CSW01_13600	0.56	-0.0
2,893,774	-		CSW01_13600	0.58	-0.1
2,893,774	-		CSW01_13600	0.58	+0.7
2,893,774	-		CSW01_13600	0.58	-0.1
2,893,774	-		CSW01_13600	0.58	+0.6
2,893,774	-		CSW01_13600	0.58	+0.3
2,893,774	-		CSW01_13600	0.58	-0.3
2,893,774	-		CSW01_13600	0.58	+0.1
2,893,774	-		CSW01_13600	0.58	-0.2
2,893,774	-		CSW01_13600	0.58	-0.8
2,893,774	-		CSW01_13600	0.58	+1.4
2,893,774	-		CSW01_13600	0.58	-0.2
2,893,774	-		CSW01_13600	0.58	+0.8
2,893,774	-		CSW01_13600	0.58	+0.1
2,893,774	-		CSW01_13600	0.58	+0.2
2,893,774	-		CSW01_13600	0.58	-0.4
2,893,774	-		CSW01_13600	0.58	-0.4
2,893,774	-		CSW01_13600	0.58	+0.1
2,893,774	-		CSW01_13600	0.58	+1.2
2,893,791	+		CSW01_13600	0.60	+0.8
2,893,801	+		CSW01_13600	0.62	+0.1
2,893,804	-		CSW01_13600	0.62	+1.0
2,893,809	-		CSW01_13600	0.63	+0.4
2,893,822	+		CSW01_13600	0.65	-0.1
2,893,847	+		CSW01_13600	0.68	+1.0
2,893,855	-		CSW01_13600	0.70	-0.5
2,893,885	-		CSW01_13600	0.74	+0.1
2,893,899	-		CSW01_13600	0.76	+2.3
2,893,921	+		CSW01_13600	0.80	+0.4
2,893,921	+		CSW01_13600	0.80	-0.3
2,893,923	-		CSW01_13600	0.80	+0.3
2,893,964	+		CSW01_13600	0.86	+0.3
2,893,976	+		CSW01_13600	0.88	-0.6
2,893,998	+				-0.1
2,894,003	-				-0.7
2,894,008	+				+0.4
2,894,042	+				+0.1
2,894,042	+				+0.2
2,894,042	+				-0.7
2,894,042	+				+1.1
2,894,045	-				-0.1
2,894,050	-				-0.0
2,894,060	-				+0.4
2,894,060	-				+0.8
2,894,069	+				-0.1
2,894,069	+				+0.4
2,894,077	-				-0.4
2,894,077	-				+0.6
2,894,077	-				-0.9
2,894,077	-				+0.1
2,894,077	-				-0.4
2,894,077	-				+0.7
2,894,079	+				-0.0
2,894,134	+				+0.4
2,894,222	-		CSW01_13605	0.23	+0.5
2,894,224	-		CSW01_13605	0.24	+1.2
2,894,266	+		CSW01_13605	0.33	-0.8
2,894,274	-		CSW01_13605	0.34	-0.5
2,894,286	+		CSW01_13605	0.37	-0.0