Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_09430

Experiment: LB_0.5%bileacids_aerobic_18HR_ZN19A

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCSW01_09425 and CSW01_09430 are separated by 0 nucleotidesCSW01_09430 and CSW01_09435 overlap by 8 nucleotides CSW01_09425: CSW01_09425 - lipoprotein-releasing system transmembrane subunit LolE, at 2,025,320 to 2,026,564 _09425 CSW01_09430: CSW01_09430 - lipoprotein-releasing system ATP-binding protein LolD, at 2,026,565 to 2,027,251 _09430 CSW01_09435: CSW01_09435 - lipoprotein-releasing system transmembrane subunit LolC, at 2,027,244 to 2,028,464 _09435 Position (kb) 2026 2027 2028Strain fitness (log2 ratio) -1 0 1at 2026.604 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_0.5%bileacids_aerobic_18HR_ZN19A
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2,026,604 - -0.6

Or see this region's nucleotide sequence