Experiment: Motility M4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_R0095 and Shew_R0096 are separated by 132 nucleotides Shew_R0096 and Shew_R0097 are separated by 20 nucleotides Shew_R0097 and Shew_R0098 are separated by 25 nucleotides Shew_R0098 and Shew_R0099 are separated by 48 nucleotides Shew_R0099 and Shew_R0100 are separated by 69 nucleotides Shew_R0100 and Shew_2919 are separated by 266 nucleotides Shew_2919 and Shew_2920 are separated by 70 nucleotides Shew_2920 and Shew_2921 are separated by 103 nucleotides
Shew_R0095: Shew_R0095 - tRNA-Leu (RefSeq), at 3,456,763 to 3,456,847
_R0095
Shew_R0096: Shew_R0096 - tRNA-Met (RefSeq), at 3,456,980 to 3,457,056
_R0096
Shew_R0097: Shew_R0097 - tRNA-Gln (RefSeq), at 3,457,077 to 3,457,151
_R0097
Shew_R0098: Shew_R0098 - tRNA-Gln (RefSeq), at 3,457,177 to 3,457,251
_R0098
Shew_R0099: Shew_R0099 - tRNA-Leu (RefSeq), at 3,457,300 to 3,457,384
_R0099
Shew_R0100: Shew_R0100 - tRNA-Met (RefSeq), at 3,457,454 to 3,457,530
_R0100
Shew_2919: Shew_2919 - translation-associated GTPase (RefSeq), at 3,457,797 to 3,458,888
_2919
Shew_2920: Shew_2920 - peptidyl-tRNA hydrolase (RefSeq), at 3,458,959 to 3,459,546
_2920
Shew_2921: Shew_2921 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq), at 3,459,650 to 3,460,843
_2921
Position (kb)
3457
3458
3459 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3458.088 kb on + strand, within Shew_2919 at 3458.500 kb on + strand, within Shew_2919 at 3458.828 kb on - strand
Per-strain Table
Or see this region's nucleotide sequence