Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3335

Experiment: m.b. Sisomicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.002 mg/ml
3,501,539	-		Dshi_3334	0.59	+1.8
3,501,649	-		Dshi_3334	0.64	-0.4
3,501,651	-		Dshi_3334	0.64	-1.1
3,501,669	-		Dshi_3334	0.65	-0.4
3,501,678	+		Dshi_3334	0.66	+0.2
3,501,701	-		Dshi_3334	0.67	+0.1
3,501,752	-		Dshi_3334	0.69	+0.2
3,501,752	-		Dshi_3334	0.69	-3.0
3,501,950	+		Dshi_3334	0.79	-1.2
3,502,156	+		Dshi_3334	0.89	-0.7
3,502,156	+		Dshi_3334	0.89	-1.8
3,502,164	-		Dshi_3334	0.89	-0.3
3,502,164	-		Dshi_3334	0.89	-0.2
3,502,300	+				+1.7
3,502,366	-				+1.0
3,502,374	+				-2.0
3,502,542	-		Dshi_3335	0.28	-0.1
3,502,566	-		Dshi_3335	0.36	-0.2
3,502,608	+		Dshi_3335	0.51	-0.7
3,502,613	+		Dshi_3335	0.52	+0.7
3,502,618	+		Dshi_3335	0.54	+0.0
3,502,621	-		Dshi_3335	0.55	-0.4
3,502,626	-		Dshi_3335	0.57	-0.0
3,502,661	-		Dshi_3335	0.69	+0.7
3,502,788	+				-1.1
3,502,788	+				+0.7
3,502,793	+				+0.5
3,502,796	-				+0.9
3,502,905	-				+0.3
3,502,914	+				+1.6
3,503,049	-		Dshi_3336	0.33	+0.3
3,503,101	+		Dshi_3336	0.42	-0.3
3,503,229	-		Dshi_3336	0.66	-0.3
3,503,249	-		Dshi_3336	0.70	+1.5
3,503,261	+		Dshi_3336	0.72	-0.5
3,503,359	-				-0.3
3,503,364	-				+1.0
3,503,383	-				+0.4
3,503,391	-				+0.1
3,503,391	-				-0.1
3,503,428	+				-0.1
3,503,428	+				-0.4
3,503,429	-				-0.1
3,503,436	-				+0.0
3,503,440	+				+0.7
3,503,459	+				+0.1
3,503,459	+				+0.6
3,503,460	+				+0.4
3,503,467	+				-0.7
3,503,467	-				-0.1
3,503,467	-				-0.4
3,503,621	+		Dshi_3337	0.11	-0.4
3,503,734	-		Dshi_3337	0.20	-1.6