Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1903

Experiment: m.b. Sisomicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.002 mg/ml
1,985,393	-		Dshi_1902	0.32	+0.5
1,985,652	+		Dshi_1902	0.51	-0.1
1,985,687	-		Dshi_1902	0.53	+0.5
1,985,702	+		Dshi_1902	0.54	-0.3
1,985,741	+		Dshi_1902	0.57	+0.9
1,985,743	+		Dshi_1902	0.57	-0.3
1,985,751	+		Dshi_1902	0.58	-0.3
1,985,854	+		Dshi_1902	0.65	+0.1
1,985,854	+		Dshi_1902	0.65	+0.4
1,985,854	+		Dshi_1902	0.65	+0.5
1,985,854	+		Dshi_1902	0.65	+0.6
1,985,862	-		Dshi_1902	0.66	-0.3
1,985,862	-		Dshi_1902	0.66	-1.2
1,985,862	-		Dshi_1902	0.66	-0.4
1,985,862	-		Dshi_1902	0.66	-0.7
1,985,883	+		Dshi_1902	0.67	+0.7
1,985,979	+		Dshi_1902	0.74	-1.0
1,985,987	+		Dshi_1902	0.75	-0.0
1,986,036	+		Dshi_1902	0.79	+0.8
1,986,044	+		Dshi_1902	0.79	-1.1
1,986,044	+		Dshi_1902	0.79	-0.2
1,986,044	+		Dshi_1902	0.79	-0.0
1,986,052	-		Dshi_1902	0.80	-0.2
1,986,069	-		Dshi_1902	0.81	-0.4
1,986,177	+		Dshi_1902	0.89	+0.0
1,986,226	-				+0.0
1,986,232	+				+0.6
1,986,240	-				+0.2
1,986,240	-				-0.2
1,986,240	-				+0.7
1,986,287	+				-0.4
1,986,287	+				+0.1
1,986,295	-				+0.5
1,986,325	+				-0.7
1,986,354	-				+0.3
1,986,371	-				-0.7
1,986,469	-		Dshi_1903	0.12	-0.1
1,986,543	+		Dshi_1903	0.20	-0.0
1,986,551	-		Dshi_1903	0.21	+0.1
1,986,551	-		Dshi_1903	0.21	+0.5
1,986,601	-		Dshi_1903	0.25	-0.4
1,986,658	-		Dshi_1903	0.31	-0.5
1,986,678	-		Dshi_1903	0.33	-0.6
1,986,692	+		Dshi_1903	0.34	-2.6
1,986,692	+		Dshi_1903	0.34	-0.1
1,986,692	+		Dshi_1903	0.34	-0.1
1,986,770	+		Dshi_1903	0.42	+1.1
1,986,939	+		Dshi_1903	0.59	-0.9
1,986,991	-		Dshi_1903	0.64	+0.0
1,987,052	-		Dshi_1903	0.70	-0.5
1,987,055	+		Dshi_1903	0.70	-0.7
1,987,063	-		Dshi_1903	0.71	-1.7
1,987,137	+		Dshi_1903	0.78	+0.5
1,987,227	+		Dshi_1903	0.87	-0.3
1,987,308	-				+0.5
1,987,326	+				+0.6
1,987,334	-				-0.1
1,987,382	-				+0.1
1,987,406	+				-0.4
1,987,600	-		Dshi_1904	0.19	+0.2
1,987,639	+		Dshi_1904	0.22	-0.3
1,987,652	-		Dshi_1904	0.23	+0.1
1,987,706	-		Dshi_1904	0.27	+0.3
1,987,744	+		Dshi_1904	0.30	+0.6
1,987,783	+		Dshi_1904	0.33	+0.7
1,987,847	+		Dshi_1904	0.38	+0.8
1,987,850	-		Dshi_1904	0.38	+0.6
1,987,980	-		Dshi_1904	0.48	+0.4
1,988,033	-		Dshi_1904	0.52	-0.3
1,988,044	+		Dshi_1904	0.53	+0.8
1,988,045	-		Dshi_1904	0.53	-1.0
1,988,089	-		Dshi_1904	0.56	+0.3
1,988,156	+		Dshi_1904	0.61	+0.5
1,988,156	+		Dshi_1904	0.61	-0.3
1,988,156	+		Dshi_1904	0.61	+1.0
1,988,156	+		Dshi_1904	0.61	-0.1
1,988,164	+		Dshi_1904	0.62	-0.4
1,988,164	-		Dshi_1904	0.62	-0.7
1,988,164	-		Dshi_1904	0.62	-0.1
1,988,164	-		Dshi_1904	0.62	+0.2
1,988,172	-		Dshi_1904	0.62	+0.1
1,988,240	-		Dshi_1904	0.68	-0.2
1,988,244	+		Dshi_1904	0.68	+0.2
1,988,245	+		Dshi_1904	0.68	-0.3
1,988,293	-		Dshi_1904	0.72	+0.5