Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_856

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
1,001,069	+				-0.5
1,001,218	-				+0.2
1,001,347	-		Pf6N2E2_855	0.24	-0.9
1,001,548	-		Pf6N2E2_855	0.48	-0.9
1,001,548	-		Pf6N2E2_855	0.48	-1.8
1,001,819	-		Pf6N2E2_855	0.82	-0.5
1,002,151	-		Pf6N2E2_856	0.14	+1.0
1,002,164	-		Pf6N2E2_856	0.15	-2.0
1,002,167	-		Pf6N2E2_856	0.16	-0.4
1,002,167	-		Pf6N2E2_856	0.16	-0.8
1,002,167	-		Pf6N2E2_856	0.16	-0.2
1,002,167	-		Pf6N2E2_856	0.16	-0.5
1,002,167	-		Pf6N2E2_856	0.16	+0.4
1,002,167	-		Pf6N2E2_856	0.16	+0.2
1,002,167	-		Pf6N2E2_856	0.16	+1.0
1,002,167	-		Pf6N2E2_856	0.16	+0.2
1,002,167	-		Pf6N2E2_856	0.16	+1.8
1,002,254	-		Pf6N2E2_856	0.24	+0.6
1,002,254	-		Pf6N2E2_856	0.24	+0.7
1,002,254	-		Pf6N2E2_856	0.24	+0.5
1,002,254	-		Pf6N2E2_856	0.24	-0.0
1,002,284	-		Pf6N2E2_856	0.27	-0.5
1,002,433	-		Pf6N2E2_856	0.42	+0.5
1,002,547	+		Pf6N2E2_856	0.53	+1.5
1,002,636	+		Pf6N2E2_856	0.62	+0.4
1,002,637	-		Pf6N2E2_856	0.62	+0.6
1,002,712	-		Pf6N2E2_856	0.70	+2.8
1,002,712	-		Pf6N2E2_856	0.70	+1.5
1,002,865	+		Pf6N2E2_856	0.85	-1.0
1,002,865	+		Pf6N2E2_856	0.85	+0.1
1,002,866	-		Pf6N2E2_856	0.85	+2.3
1,002,970	+				-0.2
1,002,971	-				+0.2
1,002,971	-				+0.0
1,002,993	+				-0.4
1,002,994	-				-0.5
1,003,030	-				+1.5
1,003,030	-				-1.6
1,003,030	-				-0.0
1,003,039	+				-0.7
1,003,039	+				-0.7
1,003,039	+				-1.2
1,003,040	-				-0.3
1,003,040	-				+1.0
1,003,040	-				+0.5
1,003,040	-				+0.0
1,003,040	-				+0.5
1,003,040	-				+0.1
1,003,040	-				-0.4
1,003,088	+				+0.5
1,003,088	+				+0.6
1,003,088	+				+0.6
1,003,088	+				+0.2
1,003,089	-				-0.0
1,003,090	+				+0.5
1,003,090	+				-0.5
1,003,091	-				+0.3
1,003,123	+				-0.2
1,003,127	-				+0.2
1,003,296	+				+0.8
1,003,296	+				+0.3
1,003,296	+				-2.8
1,003,296	+				+1.4
1,003,297	-				-0.1
1,003,297	-				-0.7
1,003,297	-				+0.6
1,003,297	-				-1.0
1,003,297	-				+0.3
1,003,297	-				+0.6
1,003,304	-				-0.9
1,003,315	-				-0.3
1,003,315	-				-0.6
1,003,330	-		Pf6N2E2_857	0.10	+0.3
1,003,330	-		Pf6N2E2_857	0.10	-0.9
1,003,385	+		Pf6N2E2_857	0.42	+0.1
1,003,385	+		Pf6N2E2_857	0.42	+1.0
1,003,386	-		Pf6N2E2_857	0.43	-0.2
1,003,386	-		Pf6N2E2_857	0.43	+0.6
1,003,393	+		Pf6N2E2_857	0.47	+0.6
1,003,393	+		Pf6N2E2_857	0.47	-0.7
1,003,394	-		Pf6N2E2_857	0.47	+0.7
1,003,394	-		Pf6N2E2_857	0.47	+0.6
1,003,394	-		Pf6N2E2_857	0.47	+1.8
1,003,394	-		Pf6N2E2_857	0.47	-0.7
1,003,394	-		Pf6N2E2_857	0.47	-1.0
1,003,511	+				-0.4
1,003,512	-				+1.8
1,003,513	+				+0.1
1,003,513	+				-0.1
1,003,514	-				+0.5
1,003,596	+				-0.5
1,003,596	+				-0.2
1,003,597	-				+0.4
1,003,597	-				-0.9
1,003,597	-				-0.7
1,003,632	-				+0.8
1,003,632	-				+1.9
1,003,632	-				-1.2
1,003,736	+				-1.2
1,003,736	+				-0.0
1,003,739	-				-0.2
1,003,879	+				-0.8
1,003,880	-				+0.5
1,003,880	-				+1.0
1,004,000	+				+0.3
1,004,001	-				-0.5
1,004,001	-				+0.6
1,004,001	-				-1.3