Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5437

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
6,243,360	-		Pf6N2E2_5435	0.54	+1.2
6,243,437	+		Pf6N2E2_5435	0.69	+0.5
6,243,438	-		Pf6N2E2_5435	0.69	+1.5
6,243,438	-		Pf6N2E2_5435	0.69	-0.1
6,243,524	+		Pf6N2E2_5435	0.86	+0.2
6,243,524	+		Pf6N2E2_5435	0.86	-0.0
6,243,524	+		Pf6N2E2_5435	0.86	-0.6
6,243,524	+		Pf6N2E2_5435	0.86	-1.2
6,243,524	+		Pf6N2E2_5435	0.86	+1.2
6,243,525	-		Pf6N2E2_5435	0.86	-0.1
6,243,525	-		Pf6N2E2_5435	0.86	-0.5
6,243,525	-		Pf6N2E2_5435	0.86	-1.3
6,243,624	+				+1.1
6,243,625	-				-0.1
6,243,625	-				-0.9
6,243,627	+				-1.0
6,243,628	-				-1.9
6,243,639	+				-0.5
6,243,639	+				+0.9
6,243,640	-				-0.3
6,243,643	+				-1.1
6,243,644	-				-0.6
6,243,644	-				-0.5
6,243,644	-				+1.2
6,243,691	-				+0.6
6,243,691	-				-0.1
6,243,691	-				+0.1
6,243,715	-		Pf6N2E2_5436	0.14	-0.3
6,243,715	-		Pf6N2E2_5436	0.14	-0.3
6,243,769	+		Pf6N2E2_5436	0.24	+2.5
6,243,851	+		Pf6N2E2_5436	0.39	-1.2
6,243,851	+		Pf6N2E2_5436	0.39	+0.6
6,243,851	+		Pf6N2E2_5436	0.39	-1.3
6,243,851	+		Pf6N2E2_5436	0.39	+0.6
6,243,851	+		Pf6N2E2_5436	0.39	+0.5
6,243,851	+		Pf6N2E2_5436	0.39	+0.1
6,243,851	+		Pf6N2E2_5436	0.39	-1.4
6,243,851	+		Pf6N2E2_5436	0.39	-0.5
6,243,851	+		Pf6N2E2_5436	0.39	-0.2
6,243,851	+		Pf6N2E2_5436	0.39	-0.2
6,243,852	-		Pf6N2E2_5436	0.39	-0.5
6,243,852	-		Pf6N2E2_5436	0.39	+0.1
6,243,852	-		Pf6N2E2_5436	0.39	-0.7
6,243,852	-		Pf6N2E2_5436	0.39	+0.2
6,243,852	-		Pf6N2E2_5436	0.39	-0.1
6,243,852	-		Pf6N2E2_5436	0.39	-0.3
6,243,852	-		Pf6N2E2_5436	0.39	+0.3
6,243,857	+		Pf6N2E2_5436	0.40	-1.0
6,243,857	+		Pf6N2E2_5436	0.40	+0.4
6,243,857	+		Pf6N2E2_5436	0.40	+0.7
6,243,857	+		Pf6N2E2_5436	0.40	-0.7
6,243,858	-		Pf6N2E2_5436	0.40	+1.5
6,243,868	+		Pf6N2E2_5436	0.42	-1.6
6,243,869	-		Pf6N2E2_5436	0.42	+2.1
6,243,889	+		Pf6N2E2_5436	0.45	-0.0
6,243,889	+		Pf6N2E2_5436	0.45	+0.3
6,243,889	+		Pf6N2E2_5436	0.45	+0.1
6,243,890	-		Pf6N2E2_5436	0.46	-1.2
6,243,891	+		Pf6N2E2_5436	0.46	-0.3
6,243,891	+		Pf6N2E2_5436	0.46	+0.8
6,243,891	+		Pf6N2E2_5436	0.46	-0.7
6,243,891	+		Pf6N2E2_5436	0.46	+0.8
6,243,891	+		Pf6N2E2_5436	0.46	+0.7
6,243,891	+		Pf6N2E2_5436	0.46	-0.0
6,243,891	+		Pf6N2E2_5436	0.46	-2.5
6,243,891	+		Pf6N2E2_5436	0.46	-1.1
6,243,891	+		Pf6N2E2_5436	0.46	+0.0
6,243,891	+		Pf6N2E2_5436	0.46	+0.3
6,243,891	+		Pf6N2E2_5436	0.46	-1.3
6,243,891	+		Pf6N2E2_5436	0.46	-1.0
6,243,891	+		Pf6N2E2_5436	0.46	-0.1
6,243,891	+		Pf6N2E2_5436	0.46	+0.3
6,243,892	-		Pf6N2E2_5436	0.46	+1.9
6,243,892	-		Pf6N2E2_5436	0.46	-2.0
6,243,892	-		Pf6N2E2_5436	0.46	-0.3
6,243,892	-		Pf6N2E2_5436	0.46	-0.2
6,243,892	-		Pf6N2E2_5436	0.46	-1.2
6,243,892	-		Pf6N2E2_5436	0.46	-2.4
6,243,892	-		Pf6N2E2_5436	0.46	-0.6
6,243,999	+		Pf6N2E2_5436	0.65	+0.9
6,244,043	-		Pf6N2E2_5436	0.73	+0.3
6,244,319	+				+0.4
6,244,348	+				+0.3
6,244,348	+				+0.8
6,244,360	+				-1.4
6,244,361	-				+0.5
6,244,361	-				-0.0
6,244,361	-				-1.8
6,244,364	+				-0.8
6,244,364	+				+0.4
6,244,364	+				-1.9
6,244,364	+				+0.7
6,244,364	+				+0.3
6,244,365	-				+1.1
6,244,370	+				+0.8
6,244,370	+				+0.1
6,244,659	+		Pf6N2E2_5437	0.54	+0.3
6,244,659	+		Pf6N2E2_5437	0.54	+1.4
6,244,659	+		Pf6N2E2_5437	0.54	+0.1
6,244,659	+		Pf6N2E2_5437	0.54	+1.7
6,244,660	-		Pf6N2E2_5437	0.54	-0.4
6,244,660	-		Pf6N2E2_5437	0.54	+1.1
6,244,660	-		Pf6N2E2_5437	0.54	-0.8
6,244,660	-		Pf6N2E2_5437	0.54	+0.8
6,244,680	+		Pf6N2E2_5437	0.57	-0.3
6,244,680	+		Pf6N2E2_5437	0.57	+0.2
6,244,681	-		Pf6N2E2_5437	0.58	-1.4
6,244,689	+		Pf6N2E2_5437	0.59	+1.1
6,244,690	-		Pf6N2E2_5437	0.59	-0.1
6,244,782	+		Pf6N2E2_5437	0.74	-0.5
6,244,800	+		Pf6N2E2_5437	0.78	+0.7
6,244,800	+		Pf6N2E2_5437	0.78	+0.6
6,244,800	+		Pf6N2E2_5437	0.78	+0.4
6,244,800	+		Pf6N2E2_5437	0.78	-2.2
6,244,800	+		Pf6N2E2_5437	0.78	+1.0
6,244,800	+		Pf6N2E2_5437	0.78	+1.8
6,244,801	-		Pf6N2E2_5437	0.78	-0.0
6,244,801	-		Pf6N2E2_5437	0.78	+0.8
6,244,827	+		Pf6N2E2_5437	0.82	+1.4
6,244,827	+		Pf6N2E2_5437	0.82	+0.4
6,244,828	-		Pf6N2E2_5437	0.82	+1.3
6,244,828	-		Pf6N2E2_5437	0.82	+0.7
6,244,881	+				+1.9
6,244,882	-				-0.5
6,244,928	+				+0.3
6,244,928	+				+0.4
6,244,929	-				+0.5
6,244,929	-				+1.1
6,244,957	+				-0.7
6,244,958	-				+0.5
6,245,120	+		Pf6N2E2_5438	0.32	+0.9
6,245,120	+		Pf6N2E2_5438	0.32	-2.1
6,245,120	+		Pf6N2E2_5438	0.32	-2.6
6,245,120	+		Pf6N2E2_5438	0.32	-0.3
6,245,121	-		Pf6N2E2_5438	0.32	-0.2
6,245,227	+		Pf6N2E2_5438	0.53	-1.1
6,245,227	+		Pf6N2E2_5438	0.53	-1.1
6,245,227	+		Pf6N2E2_5438	0.53	+0.1
6,245,228	-		Pf6N2E2_5438	0.53	-0.4
6,245,422	+		Pf6N2E2_5438	0.90	-0.7
6,245,422	+		Pf6N2E2_5438	0.90	-1.2
6,245,422	+		Pf6N2E2_5438	0.90	-1.1
6,245,422	+		Pf6N2E2_5438	0.90	-0.7
6,245,422	+		Pf6N2E2_5438	0.90	+0.9
6,245,423	-				-1.0
6,245,423	-				+0.4
6,245,443	+				+0.7
6,245,444	-				-1.4
6,245,743	-				+0.3
6,245,743	-				+1.2
6,245,743	-				-1.9
6,245,743	-				-0.4
6,245,743	-				-0.1
6,245,743	-				+1.5
6,245,743	-				-1.6
6,245,743	-				-1.0