Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4485

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
5,217,313	+		Pf6N2E2_4484	0.51	-0.1
5,217,313	+		Pf6N2E2_4484	0.51	-0.3
5,217,313	+		Pf6N2E2_4484	0.51	+0.1
5,217,313	+		Pf6N2E2_4484	0.51	+1.6
5,217,313	+		Pf6N2E2_4484	0.51	-0.5
5,217,313	+		Pf6N2E2_4484	0.51	-0.3
5,217,313	+		Pf6N2E2_4484	0.51	+0.6
5,217,314	-		Pf6N2E2_4484	0.51	-0.1
5,217,314	-		Pf6N2E2_4484	0.51	+0.1
5,217,314	-		Pf6N2E2_4484	0.51	-0.7
5,217,314	-		Pf6N2E2_4484	0.51	-0.0
5,217,314	-		Pf6N2E2_4484	0.51	-1.4
5,217,314	-		Pf6N2E2_4484	0.51	+0.4
5,217,315	+		Pf6N2E2_4484	0.51	-0.7
5,217,315	+		Pf6N2E2_4484	0.51	-1.2
5,217,315	+		Pf6N2E2_4484	0.51	-0.5
5,217,315	+		Pf6N2E2_4484	0.51	-1.2
5,217,315	+		Pf6N2E2_4484	0.51	+0.0
5,217,316	-		Pf6N2E2_4484	0.51	+1.4
5,217,316	-		Pf6N2E2_4484	0.51	-1.0
5,217,316	-		Pf6N2E2_4484	0.51	+0.1
5,217,448	+		Pf6N2E2_4484	0.59	-0.6
5,217,475	+		Pf6N2E2_4484	0.61	-2.2
5,217,475	+		Pf6N2E2_4484	0.61	+0.4
5,217,476	-		Pf6N2E2_4484	0.61	+0.5
5,217,476	-		Pf6N2E2_4484	0.61	-1.4
5,217,592	+		Pf6N2E2_4484	0.68	+0.7
5,217,593	-		Pf6N2E2_4484	0.68	+1.0
5,217,644	-		Pf6N2E2_4484	0.71	+0.8
5,217,644	-		Pf6N2E2_4484	0.71	+1.0
5,217,739	+		Pf6N2E2_4484	0.77	-0.6
5,217,766	+		Pf6N2E2_4484	0.79	-0.9
5,217,767	-		Pf6N2E2_4484	0.79	-0.0
5,217,865	+		Pf6N2E2_4484	0.85	-1.6
5,217,865	+		Pf6N2E2_4484	0.85	+1.3
5,217,865	+		Pf6N2E2_4484	0.85	-0.1
5,217,865	+		Pf6N2E2_4484	0.85	-1.5
5,217,866	-		Pf6N2E2_4484	0.85	+0.1
5,217,866	-		Pf6N2E2_4484	0.85	+0.5
5,218,049	+				+0.2
5,218,083	-				+0.5
5,218,083	-				+0.2
5,218,108	+				+0.1
5,218,108	+				+0.7
5,218,108	+				-0.4
5,218,108	+				-0.7
5,218,109	-				+0.8
5,218,122	-				-1.1
5,218,122	-				+1.2
5,218,134	+				-0.7
5,218,134	+				+0.6
5,218,134	+				+0.1
5,218,135	-				+0.5
5,218,277	+				-0.5
5,218,277	+				-0.2
5,218,277	+				+0.5
5,218,278	-				+0.7
5,218,278	-				+2.7
5,218,287	+				-0.1
5,218,287	+				+0.3
5,218,287	+				+2.0
5,218,288	-				-0.4
5,218,288	-				-0.4
5,218,288	-				-0.6
5,218,288	-				+1.6
5,218,412	-		Pf6N2E2_4485	0.13	+0.5
5,218,412	-		Pf6N2E2_4485	0.13	+0.8
5,218,412	-		Pf6N2E2_4485	0.13	+0.8
5,218,518	+		Pf6N2E2_4485	0.23	+2.8
5,218,518	+		Pf6N2E2_4485	0.23	+0.2
5,218,519	-		Pf6N2E2_4485	0.23	-0.2
5,218,565	+		Pf6N2E2_4485	0.28	-0.0
5,218,565	+		Pf6N2E2_4485	0.28	+0.4
5,218,566	-		Pf6N2E2_4485	0.28	+0.6
5,218,566	-		Pf6N2E2_4485	0.28	+0.1
5,218,566	-		Pf6N2E2_4485	0.28	-0.4
5,218,566	-		Pf6N2E2_4485	0.28	+1.4
5,218,566	-		Pf6N2E2_4485	0.28	+0.2
5,218,566	-		Pf6N2E2_4485	0.28	+0.1
5,218,566	-		Pf6N2E2_4485	0.28	+1.2
5,218,566	-		Pf6N2E2_4485	0.28	+0.0
5,218,569	+		Pf6N2E2_4485	0.28	-0.2
5,218,569	+		Pf6N2E2_4485	0.28	+1.7
5,218,569	+		Pf6N2E2_4485	0.28	-0.2
5,218,570	-		Pf6N2E2_4485	0.28	+1.0
5,218,570	-		Pf6N2E2_4485	0.28	-1.6
5,218,570	-		Pf6N2E2_4485	0.28	+0.4
5,218,827	+		Pf6N2E2_4485	0.52	-1.1
5,218,969	-		Pf6N2E2_4485	0.65	-0.1
5,219,095	+		Pf6N2E2_4485	0.77	+1.6
5,219,096	-		Pf6N2E2_4485	0.77	+0.3
5,219,096	-		Pf6N2E2_4485	0.77	+0.5
5,219,096	-		Pf6N2E2_4485	0.77	+1.0
5,219,096	-		Pf6N2E2_4485	0.77	-0.2
5,219,096	-		Pf6N2E2_4485	0.77	-0.5
5,219,198	+		Pf6N2E2_4485	0.86	-0.4
5,219,198	+		Pf6N2E2_4485	0.86	+1.0
5,219,198	+		Pf6N2E2_4485	0.86	+0.4
5,219,199	-		Pf6N2E2_4485	0.86	-0.5
5,219,210	+		Pf6N2E2_4485	0.87	+0.7
5,219,211	-		Pf6N2E2_4485	0.87	+0.3
5,219,211	-		Pf6N2E2_4485	0.87	-0.2
5,219,216	+		Pf6N2E2_4485	0.88	+0.2
5,219,217	-		Pf6N2E2_4485	0.88	+0.2
5,219,273	-				+0.4
5,219,285	+				+1.4
5,219,286	-				+0.0
5,219,346	+				+1.3
5,219,346	+				+0.1
5,219,347	-				-1.2
5,219,347	-				+0.4
5,219,347	-				+0.7
5,219,385	+				+0.5
5,219,385	+				-0.7
5,219,386	-				+0.4
5,219,386	-				+1.1
5,219,401	+				-1.1
5,219,401	+				-0.8
5,219,401	+				+0.6
5,219,401	+				-2.2
5,219,401	+				-2.1
5,219,401	+				-2.8
5,219,402	-				-1.8
5,219,402	-				+0.3
5,219,410	+				-1.2
5,219,612	+		Pf6N2E2_4486	0.55	-0.1
5,219,612	+		Pf6N2E2_4486	0.55	-0.5
5,219,612	+		Pf6N2E2_4486	0.55	-0.5
5,219,612	+		Pf6N2E2_4486	0.55	-0.5
5,219,612	+		Pf6N2E2_4486	0.55	+0.1
5,219,613	-		Pf6N2E2_4486	0.55	+0.0
5,219,613	-		Pf6N2E2_4486	0.55	-1.2
5,219,613	-		Pf6N2E2_4486	0.55	+0.4
5,219,613	-		Pf6N2E2_4486	0.55	+0.1
5,219,613	-		Pf6N2E2_4486	0.55	-0.4
5,219,690	+		Pf6N2E2_4486	0.75	-1.0
5,219,740	+		Pf6N2E2_4486	0.88	-2.0
5,219,762	+				-0.2
5,219,773	+				-0.1
5,219,905	+				-0.7
5,219,906	-				-0.8
5,219,921	-				-0.9
5,219,921	-				-0.9
5,220,032	-				-0.4
5,220,033	+				+0.4
5,220,033	+				+0.6
5,220,033	+				+1.1
5,220,034	-				+0.1
5,220,034	-				+0.3
5,220,034	-				-0.6
5,220,034	-				-1.5
5,220,034	-				-0.0
5,220,034	-				+1.0
5,220,034	-				+1.2
5,220,036	+				+0.6
5,220,036	+				+1.5
5,220,049	-				+0.3
5,220,068	+				-0.6
5,220,068	+				-0.1
5,220,108	-				-0.6
5,220,111	+				-0.7
5,220,112	-				+1.4
5,220,112	-				+0.2
5,220,112	-				+0.6
5,220,124	+				-0.4
5,220,124	+				+0.1
5,220,213	+				-0.1
5,220,235	+				+0.6
5,220,302	+		Pf6N2E2_4487	0.15	+0.2
5,220,302	+		Pf6N2E2_4487	0.15	+0.3
5,220,346	+		Pf6N2E2_4487	0.19	-0.8
5,220,346	+		Pf6N2E2_4487	0.19	+1.0