Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_43

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
80,748	+		Pf6N2E2_42	0.73	-1.5
80,749	-		Pf6N2E2_42	0.73	-0.1
81,170	+				+0.0
81,170	+				+0.8
81,170	+				+0.3
81,171	-				-0.1
81,171	-				-0.7
81,171	-				+0.6
81,344	+				-1.9
81,344	+				+0.9
81,344	+				-1.7
81,344	+				-0.2
81,345	-				-1.1
81,353	+				+0.2
81,353	+				-1.2
81,353	+				+0.3
81,354	-				-0.9
81,354	-				+0.1
81,354	-				+0.3
81,354	-				-1.2
81,362	+				+0.4
81,362	+				-0.5
81,429	+				-0.2
81,532	+		Pf6N2E2_43	0.14	-1.9
81,751	+		Pf6N2E2_43	0.30	+2.3
81,751	+		Pf6N2E2_43	0.30	-1.4
81,751	+		Pf6N2E2_43	0.30	-0.9
81,751	+		Pf6N2E2_43	0.30	-1.3
81,751	+		Pf6N2E2_43	0.30	+0.9
81,752	-		Pf6N2E2_43	0.31	+1.1
81,752	-		Pf6N2E2_43	0.31	-0.2
81,752	-		Pf6N2E2_43	0.31	-2.2
81,823	+		Pf6N2E2_43	0.36	-0.2
81,823	+		Pf6N2E2_43	0.36	-0.4
81,824	-		Pf6N2E2_43	0.36	+0.1
81,824	-		Pf6N2E2_43	0.36	-1.6
81,824	-		Pf6N2E2_43	0.36	-0.3
81,824	-		Pf6N2E2_43	0.36	-0.8
82,003	+		Pf6N2E2_43	0.50	+0.9
82,049	-		Pf6N2E2_43	0.53	+0.9
82,619	-				-0.9
82,619	-				-0.6
82,619	-				-2.4
82,619	-				+0.3
82,619	-				+0.1
82,666	+				+0.7
82,667	-				+0.5
82,667	-				-0.2
82,667	-				-0.4
82,753	+				-0.9
82,753	+				+0.1
82,753	+				-1.6
82,754	-				-0.8
82,754	-				-0.6
82,754	-				+1.3
82,754	-				+0.3
82,754	-				-0.1
82,828	+				-0.7
82,829	-				-0.4
82,829	-				+0.6
82,829	-				+0.3
82,829	-				-0.2
82,829	-				+1.3
82,829	-				-1.1
82,834	+				-1.8
82,861	-				-1.2
82,861	-				-0.3
82,887	+				+0.4
82,887	+				-1.0
82,888	-				+0.7
82,888	-				+1.6
82,888	-				-0.1
82,905	+				-0.6
82,906	-				-0.1
82,912	+				+1.0
82,912	+				+0.1
82,912	+				-1.6
82,913	-				-0.1
82,948	+				-1.4
83,035	+				+1.1
83,035	+				+0.5
83,036	-				-0.1
83,099	+		Pf6N2E2_44	0.10	+0.1
83,100	-		Pf6N2E2_44	0.10	-0.1
83,100	-		Pf6N2E2_44	0.10	-1.5
83,136	-				-0.5
83,158	+		Pf6N2E2_44	0.14	+0.8
83,204	+		Pf6N2E2_44	0.16	-0.4
83,220	-		Pf6N2E2_44	0.17	-0.5
83,321	+		Pf6N2E2_44	0.23	-0.5
83,321	+		Pf6N2E2_44	0.23	+0.1
83,322	-		Pf6N2E2_44	0.23	+0.4
83,366	+		Pf6N2E2_44	0.26	-0.5
83,367	-		Pf6N2E2_44	0.26	+0.2
83,367	-		Pf6N2E2_44	0.26	+0.5
83,375	+		Pf6N2E2_44	0.27	+0.6
83,375	+		Pf6N2E2_44	0.27	-1.6
83,432	+		Pf6N2E2_44	0.30	-0.7
83,432	+		Pf6N2E2_44	0.30	-2.3
83,432	+		Pf6N2E2_44	0.30	+0.3
83,433	-		Pf6N2E2_44	0.30	+0.5
83,529	+		Pf6N2E2_44	0.36	-1.0
83,529	+		Pf6N2E2_44	0.36	-1.6
83,529	+		Pf6N2E2_44	0.36	+0.7
83,530	-		Pf6N2E2_44	0.36	-1.8
83,530	-		Pf6N2E2_44	0.36	+0.5