Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2916

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
3,408,016	+		Pf6N2E2_2915	0.54	-1.7
3,408,016	+		Pf6N2E2_2915	0.54	+0.0
3,408,017	-		Pf6N2E2_2915	0.55	+0.1
3,408,017	-		Pf6N2E2_2915	0.55	-0.3
3,408,155	+		Pf6N2E2_2915	0.64	-0.4
3,408,155	+		Pf6N2E2_2915	0.64	-0.0
3,408,156	-		Pf6N2E2_2915	0.64	-0.3
3,408,156	-		Pf6N2E2_2915	0.64	-0.5
3,408,191	+		Pf6N2E2_2915	0.66	-1.2
3,408,192	-		Pf6N2E2_2915	0.66	-0.9
3,408,357	+		Pf6N2E2_2915	0.77	-0.6
3,408,358	-		Pf6N2E2_2915	0.77	-0.2
3,408,358	-		Pf6N2E2_2915	0.77	-0.7
3,408,712	+				+1.2
3,408,713	-				-0.9
3,408,713	-				-1.1
3,408,839	+				-0.0
3,408,840	-				+0.3
3,408,840	-				+0.7
3,408,840	-				+0.7
3,408,840	-				-1.1
3,408,896	+				-0.2
3,408,897	-				+0.1
3,408,897	-				-1.0
3,409,043	+		Pf6N2E2_2916	0.10	-0.8
3,409,043	+		Pf6N2E2_2916	0.10	+1.4
3,409,043	+		Pf6N2E2_2916	0.10	+0.2
3,409,044	-		Pf6N2E2_2916	0.10	+0.4
3,409,044	-		Pf6N2E2_2916	0.10	+0.3
3,409,044	-		Pf6N2E2_2916	0.10	+0.2
3,409,044	-		Pf6N2E2_2916	0.10	-0.9
3,409,044	-		Pf6N2E2_2916	0.10	+0.3
3,409,044	-		Pf6N2E2_2916	0.10	+1.3
3,409,128	-		Pf6N2E2_2916	0.16	+0.9
3,409,178	+		Pf6N2E2_2916	0.20	+1.4
3,409,178	+		Pf6N2E2_2916	0.20	-0.2
3,409,179	-		Pf6N2E2_2916	0.20	+0.5
3,409,179	-		Pf6N2E2_2916	0.20	+0.5
3,409,179	-		Pf6N2E2_2916	0.20	-0.6
3,409,193	+		Pf6N2E2_2916	0.21	+0.6
3,409,194	-		Pf6N2E2_2916	0.21	+0.1
3,409,194	-		Pf6N2E2_2916	0.21	+1.0
3,409,194	-		Pf6N2E2_2916	0.21	-0.9
3,409,251	-		Pf6N2E2_2916	0.25	+0.6
3,409,251	-		Pf6N2E2_2916	0.25	+1.0
3,409,262	+		Pf6N2E2_2916	0.26	+0.0
3,409,262	+		Pf6N2E2_2916	0.26	+0.4
3,409,263	-		Pf6N2E2_2916	0.26	+0.1
3,409,270	-		Pf6N2E2_2916	0.27	-0.8
3,409,270	-		Pf6N2E2_2916	0.27	+0.2
3,409,270	-		Pf6N2E2_2916	0.27	+0.6
3,409,270	-		Pf6N2E2_2916	0.27	-0.0
3,409,272	-		Pf6N2E2_2916	0.27	-0.6
3,409,520	+		Pf6N2E2_2916	0.45	-1.6
3,409,521	-		Pf6N2E2_2916	0.45	-0.2
3,409,521	-		Pf6N2E2_2916	0.45	-0.3
3,409,521	-		Pf6N2E2_2916	0.45	-1.6
3,409,559	+		Pf6N2E2_2916	0.48	+0.1
3,409,559	+		Pf6N2E2_2916	0.48	-1.8
3,409,559	+		Pf6N2E2_2916	0.48	-0.2
3,409,559	+		Pf6N2E2_2916	0.48	+1.4
3,409,559	+		Pf6N2E2_2916	0.48	+0.7
3,409,560	-		Pf6N2E2_2916	0.48	+0.5
3,409,560	-		Pf6N2E2_2916	0.48	+0.7
3,409,560	-		Pf6N2E2_2916	0.48	-0.9
3,409,560	-		Pf6N2E2_2916	0.48	+0.9
3,409,560	-		Pf6N2E2_2916	0.48	-0.5
3,409,560	-		Pf6N2E2_2916	0.48	-0.6
3,409,560	-		Pf6N2E2_2916	0.48	+1.0
3,409,560	-		Pf6N2E2_2916	0.48	-0.1
3,409,560	-		Pf6N2E2_2916	0.48	-0.6
3,409,560	-		Pf6N2E2_2916	0.48	-0.7
3,409,563	+		Pf6N2E2_2916	0.49	-0.0
3,409,712	-		Pf6N2E2_2916	0.60	-1.3
3,409,908	-		Pf6N2E2_2916	0.74	+0.2
3,410,078	+		Pf6N2E2_2916	0.87	+1.0
3,410,078	+		Pf6N2E2_2916	0.87	+1.7
3,410,272	-				-1.7
3,410,272	-				+1.4
3,410,304	+				+0.8
3,410,304	+				+0.1
3,410,304	+				-0.2
3,410,304	+				-0.1
3,410,305	-				+0.3
3,410,305	-				-0.9
3,410,391	+				+0.8
3,410,392	-				+1.9
3,410,429	+				+0.2
3,410,430	-				+0.6
3,410,460	+				+0.7
3,410,460	+				-0.6
3,410,461	-				+0.1
3,410,495	+				+0.3
3,410,498	-				+1.0
3,410,598	+				+1.2
3,410,599	-				-0.8
3,410,723	+				+1.3
3,410,724	-				-0.3
3,410,724	-				+0.0
3,410,724	-				+0.5
3,410,724	-				+0.7
3,410,724	-				-0.0
3,410,730	-				+0.7
3,410,730	-				+0.5
3,410,730	-				+0.7
3,410,730	-				+0.0
3,410,730	-				+0.1
3,410,730	-				+0.8
3,410,815	-				+1.2
3,410,815	-				-0.0
3,410,815	-				+0.5
3,410,918	+		Pf6N2E2_2917	0.14	-0.0
3,410,918	+		Pf6N2E2_2917	0.14	+0.5
3,410,919	-		Pf6N2E2_2917	0.14	-0.4
3,410,937	-		Pf6N2E2_2917	0.15	-2.4
3,410,937	-		Pf6N2E2_2917	0.15	+0.5
3,411,152	+		Pf6N2E2_2917	0.25	+3.4
3,411,153	-		Pf6N2E2_2917	0.25	+0.6
3,411,153	-		Pf6N2E2_2917	0.25	+0.8
3,411,158	-		Pf6N2E2_2917	0.25	+0.8
3,411,158	-		Pf6N2E2_2917	0.25	-0.9
3,411,227	+		Pf6N2E2_2917	0.28	+0.4
3,411,228	-		Pf6N2E2_2917	0.28	+0.1