Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2725

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
3,215,830	-				+0.1
3,215,830	-				-0.1
3,215,905	+				+0.2
3,215,905	+				+0.9
3,215,905	+				+2.0
3,215,906	-				-0.1
3,215,906	-				+0.0
3,215,906	-				-1.7
3,215,906	-				-1.0
3,215,906	-				+0.8
3,215,941	+				+1.9
3,215,941	+				-0.6
3,215,942	-				+0.5
3,216,092	+		Pf6N2E2_2724	0.24	+0.9
3,216,119	+		Pf6N2E2_2724	0.29	+0.3
3,216,119	+		Pf6N2E2_2724	0.29	+0.7
3,216,404	+		Pf6N2E2_2724	0.77	+0.6
3,216,405	-		Pf6N2E2_2724	0.77	+0.7
3,216,464	+		Pf6N2E2_2724	0.87	-0.3
3,216,464	+		Pf6N2E2_2724	0.87	+1.2
3,216,540	-				+0.6
3,216,566	+				-0.3
3,216,566	+				-0.8
3,216,566	+				-0.4
3,216,567	-				+0.4
3,216,567	-				-0.4
3,216,567	-				+0.3
3,216,567	-				-1.0
3,216,574	+				+0.3
3,216,574	+				-0.1
3,216,574	+				-0.5
3,216,574	+				+2.9
3,216,575	-				-1.3
3,216,575	-				+0.9
3,216,671	+				+0.3
3,216,671	+				-1.2
3,216,672	-				+0.3
3,216,743	-				+0.3
3,216,743	-				+0.9
3,216,743	-				+0.4
3,216,743	-				-0.9
3,216,743	-				+0.1
3,217,092	+		Pf6N2E2_2725	0.34	-0.3
3,217,092	+		Pf6N2E2_2725	0.34	-1.0
3,217,092	+		Pf6N2E2_2725	0.34	+0.7
3,217,092	+		Pf6N2E2_2725	0.34	-0.3
3,217,092	+		Pf6N2E2_2725	0.34	+0.7
3,217,093	-		Pf6N2E2_2725	0.34	+0.8
3,217,137	+		Pf6N2E2_2725	0.39	+0.9
3,217,137	+		Pf6N2E2_2725	0.39	+1.7
3,217,138	-		Pf6N2E2_2725	0.39	+2.3
3,217,138	-		Pf6N2E2_2725	0.39	-2.5
3,217,138	-		Pf6N2E2_2725	0.39	-1.2
3,217,228	-		Pf6N2E2_2725	0.48	+0.6
3,217,228	-		Pf6N2E2_2725	0.48	+1.7
3,217,228	-		Pf6N2E2_2725	0.48	-2.5
3,217,228	-		Pf6N2E2_2725	0.48	+0.1
3,217,373	+		Pf6N2E2_2725	0.64	+0.1
3,217,374	-		Pf6N2E2_2725	0.64	-0.5
3,217,374	-		Pf6N2E2_2725	0.64	-0.2
3,217,398	+		Pf6N2E2_2725	0.67	+0.6
3,217,398	+		Pf6N2E2_2725	0.67	-0.4
3,217,398	+		Pf6N2E2_2725	0.67	-0.8
3,217,398	+		Pf6N2E2_2725	0.67	+0.1
3,217,398	+		Pf6N2E2_2725	0.67	+0.1
3,217,398	+		Pf6N2E2_2725	0.67	+0.6
3,217,398	+		Pf6N2E2_2725	0.67	+0.5
3,217,399	-		Pf6N2E2_2725	0.67	+0.4
3,217,399	-		Pf6N2E2_2725	0.67	-0.2
3,217,399	-		Pf6N2E2_2725	0.67	-1.6
3,217,399	-		Pf6N2E2_2725	0.67	+1.1
3,217,399	-		Pf6N2E2_2725	0.67	+0.3
3,217,399	-		Pf6N2E2_2725	0.67	+0.6
3,217,399	-		Pf6N2E2_2725	0.67	+0.0
3,217,399	-		Pf6N2E2_2725	0.67	-0.3
3,217,399	-		Pf6N2E2_2725	0.67	+1.3
3,217,399	-		Pf6N2E2_2725	0.67	+0.6
3,217,399	-		Pf6N2E2_2725	0.67	+0.9
3,217,410	+		Pf6N2E2_2725	0.68	+0.9
3,217,411	-		Pf6N2E2_2725	0.68	-0.8
3,217,411	-		Pf6N2E2_2725	0.68	+0.5
3,217,411	-		Pf6N2E2_2725	0.68	-0.6
3,217,459	-		Pf6N2E2_2725	0.73	-0.0
3,217,528	+		Pf6N2E2_2725	0.81	-0.3
3,217,528	+		Pf6N2E2_2725	0.81	+0.8
3,217,528	+		Pf6N2E2_2725	0.81	-1.3
3,217,528	+		Pf6N2E2_2725	0.81	+0.8
3,217,528	+		Pf6N2E2_2725	0.81	-0.9
3,217,747	+				+0.3
3,217,747	+				-0.4
3,217,766	+				-0.8
3,217,766	+				+0.7
3,217,884	+		Pf6N2E2_2726	0.17	+0.9
3,217,885	-		Pf6N2E2_2726	0.17	+0.0
3,217,885	-		Pf6N2E2_2726	0.17	-0.2
3,217,885	-		Pf6N2E2_2726	0.17	-0.2
3,218,073	+		Pf6N2E2_2726	0.81	+0.7
3,218,073	+		Pf6N2E2_2726	0.81	+0.6
3,218,073	+		Pf6N2E2_2726	0.81	-0.4
3,218,073	+		Pf6N2E2_2726	0.81	-1.2
3,218,073	+		Pf6N2E2_2726	0.81	+1.7
3,218,073	+		Pf6N2E2_2726	0.81	+0.1
3,218,073	+		Pf6N2E2_2726	0.81	+1.5
3,218,073	+		Pf6N2E2_2726	0.81	-0.5
3,218,073	+		Pf6N2E2_2726	0.81	+2.0
3,218,074	-		Pf6N2E2_2726	0.81	+0.1
3,218,074	-		Pf6N2E2_2726	0.81	-1.2
3,218,074	-		Pf6N2E2_2726	0.81	-0.8
3,218,074	-		Pf6N2E2_2726	0.81	+0.6
3,218,074	-		Pf6N2E2_2726	0.81	+0.3
3,218,074	-		Pf6N2E2_2726	0.81	+0.9
3,218,074	-		Pf6N2E2_2726	0.81	-0.3
3,218,074	-		Pf6N2E2_2726	0.81	+0.1
3,218,074	-		Pf6N2E2_2726	0.81	+1.1
3,218,074	-		Pf6N2E2_2726	0.81	+0.9
3,218,074	-		Pf6N2E2_2726	0.81	+0.4
3,218,079	+		Pf6N2E2_2726	0.83	+1.9
3,218,079	+		Pf6N2E2_2726	0.83	+0.3
3,218,079	+		Pf6N2E2_2726	0.83	-0.4
3,218,080	-		Pf6N2E2_2726	0.83	-0.1
3,218,080	-		Pf6N2E2_2726	0.83	+0.6
3,218,080	-		Pf6N2E2_2726	0.83	-0.3
3,218,080	-		Pf6N2E2_2726	0.83	+0.7
3,218,080	-		Pf6N2E2_2726	0.83	+0.2
3,218,106	+				-0.4
3,218,106	+				-0.9
3,218,119	+				+0.6
3,218,119	+				+1.1
3,218,119	+				+1.4
3,218,119	+				+0.6
3,218,119	+				-1.2
3,218,120	-				-0.3
3,218,497	-		Pf6N2E2_2727	0.33	-1.8
3,218,657	+		Pf6N2E2_2727	0.47	+0.9
3,218,658	-		Pf6N2E2_2727	0.47	-0.1
3,218,666	+		Pf6N2E2_2727	0.48	+0.7