Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2015

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
2,397,062	-				+0.5
2,397,062	-				+1.0
2,397,119	-				-0.5
2,397,174	-				+0.9
2,397,207	+				+0.1
2,397,247	+				-1.2
2,397,314	+				+1.6
2,397,403	-				+0.9
2,397,424	+				+0.2
2,397,424	+				-0.1
2,397,424	+				-0.6
2,397,440	-				+0.5
2,397,440	-				-0.2
2,397,508	-				-0.4
2,397,616	+				+1.0
2,397,616	+				-2.6
2,397,617	-				+1.0
2,397,674	+				-0.9
2,397,675	-				-0.8
2,397,764	+				+1.6
2,397,790	+				-1.0
2,397,853	-				-1.0
2,397,853	-				-1.8
2,397,853	-				+0.3
2,397,884	-				+0.9
2,397,884	-				-1.6
2,397,909	+				-0.3
2,397,910	-				-0.2
2,397,910	-				+2.5
2,397,910	-				-1.8
2,397,910	-				+0.4
2,397,919	+				-0.7
2,397,920	-				+0.5
2,397,920	-				-0.9
2,397,955	-				+0.9
2,398,003	+				+0.8
2,398,004	-				+0.5
2,398,004	-				-0.2
2,398,010	+				+0.3
2,398,011	-				+0.2
2,398,027	-				-0.4
2,398,027	-				-0.4
2,398,027	-				+2.5
2,398,139	-				-0.5
2,398,188	+				+1.0
2,398,189	-				-1.2
2,398,189	-				-0.4
2,398,189	-				+0.2
2,398,225	-				+0.7
2,398,417	-		Pf6N2E2_2015	0.19	+2.1
2,398,453	+		Pf6N2E2_2015	0.20	-0.0
2,398,578	+		Pf6N2E2_2015	0.26	-0.7
2,398,849	-		Pf6N2E2_2015	0.39	+1.0
2,398,980	+		Pf6N2E2_2015	0.45	-0.4
2,398,980	+		Pf6N2E2_2015	0.45	+0.7
2,399,207	-		Pf6N2E2_2015	0.55	+0.5
2,399,276	-		Pf6N2E2_2015	0.58	-1.4
2,399,276	-		Pf6N2E2_2015	0.58	+2.4
2,399,391	+		Pf6N2E2_2015	0.63	-1.0
2,399,391	+		Pf6N2E2_2015	0.63	+0.7
2,399,392	-		Pf6N2E2_2015	0.63	+0.2
2,399,392	-		Pf6N2E2_2015	0.63	-0.4
2,399,392	-		Pf6N2E2_2015	0.63	-0.8
2,399,392	-		Pf6N2E2_2015	0.63	-0.7
2,399,392	-		Pf6N2E2_2015	0.63	+0.2
2,399,416	+		Pf6N2E2_2015	0.65	+0.6
2,399,416	+		Pf6N2E2_2015	0.65	-1.0
2,399,417	-		Pf6N2E2_2015	0.65	-0.7
2,399,439	+		Pf6N2E2_2015	0.66	-1.7
2,399,439	+		Pf6N2E2_2015	0.66	+0.1
2,399,440	-		Pf6N2E2_2015	0.66	-2.3
2,399,452	-		Pf6N2E2_2015	0.66	-0.5
2,399,488	+		Pf6N2E2_2015	0.68	+0.3
2,399,522	+		Pf6N2E2_2015	0.69	-0.1
2,399,554	+		Pf6N2E2_2015	0.71	+0.2
2,399,568	+		Pf6N2E2_2015	0.71	+1.2
2,399,569	-		Pf6N2E2_2015	0.72	-0.5
2,399,569	-		Pf6N2E2_2015	0.72	-1.4
2,399,569	-		Pf6N2E2_2015	0.72	-1.4
2,399,679	-		Pf6N2E2_2015	0.77	-1.3
2,399,747	-		Pf6N2E2_2015	0.80	+0.1
2,399,747	-		Pf6N2E2_2015	0.80	-2.0
2,399,782	-		Pf6N2E2_2015	0.81	-1.3
2,399,782	-		Pf6N2E2_2015	0.81	-0.6
2,399,782	-		Pf6N2E2_2015	0.81	-1.1
2,399,831	-		Pf6N2E2_2015	0.84	-0.8
2,399,850	-		Pf6N2E2_2015	0.84	-0.9
2,399,892	-		Pf6N2E2_2015	0.86	+1.0
2,399,892	-		Pf6N2E2_2015	0.86	-0.1
2,399,893	+		Pf6N2E2_2015	0.86	-1.3
2,399,893	+		Pf6N2E2_2015	0.86	-1.0
2,399,893	+		Pf6N2E2_2015	0.86	-0.1
2,399,893	+		Pf6N2E2_2015	0.86	-0.4
2,399,893	+		Pf6N2E2_2015	0.86	+0.8
2,399,893	+		Pf6N2E2_2015	0.86	-0.6
2,399,894	-		Pf6N2E2_2015	0.86	+1.6
2,399,894	-		Pf6N2E2_2015	0.86	-0.1
2,399,894	-		Pf6N2E2_2015	0.86	-0.1
2,399,894	-		Pf6N2E2_2015	0.86	+2.0
2,399,894	-		Pf6N2E2_2015	0.86	-0.1
2,399,894	-		Pf6N2E2_2015	0.86	-1.3
2,399,968	+		Pf6N2E2_2015	0.90	-0.5
2,399,968	+		Pf6N2E2_2015	0.90	+0.2
2,399,969	-		Pf6N2E2_2015	0.90	+0.1
2,399,969	-				+1.4
2,400,068	+				+1.1
2,400,069	-				+1.0
2,400,069	-				-0.0
2,400,107	+				-1.0
2,400,107	+				+0.1
2,400,160	-				+0.2
2,400,180	+				-1.4
2,400,180	+				+0.4
2,400,180	+				+2.0
2,400,181	-				+0.8
2,400,181	-				+0.0
2,400,191	+				+0.3
2,400,191	+				+0.1
2,400,192	-				+0.5
2,400,192	-				-0.6
2,400,192	-				-0.7
2,400,192	-				-1.2
2,400,192	-				-0.8
2,400,257	-				-0.8
2,400,277	-				-0.9
2,400,434	-				-1.3
2,400,472	+				+0.4
2,400,472	+				+0.6
2,400,473	-				+1.2
2,400,473	-				+0.5
2,400,473	-				-0.4
2,400,565	-				-1.3
2,400,588	+				-0.4
2,400,589	-				+0.2
2,400,589	-				+1.4
2,400,630	+				+0.4
2,400,725	+				-1.0
2,400,725	+				-0.0
2,400,734	+				+1.4
2,400,765	+				+0.4
2,400,766	-				+0.6
2,400,766	-				+2.0
2,400,766	-				-0.3
2,400,768	+				-0.6
2,400,768	+				-0.4
2,400,768	+				+0.7
2,400,769	-				-1.7
2,400,769	-				-1.2
2,400,769	-				-0.6
2,400,791	+				-1.4
2,400,791	+				+1.6
2,400,792	-				+2.7
2,400,792	-				+0.3
2,400,854	+				+0.7
2,400,855	-				+0.2
2,400,855	-				-0.9
2,400,855	-				+2.8
2,400,885	+				+0.5
2,400,885	+				-0.5
2,400,886	-				-0.0
2,400,902	+				-1.0
2,400,903	-				-0.4
2,400,936	-				-0.0
2,400,936	-				-0.2
2,401,010	-				+0.2
2,401,026	+				-1.1
2,401,026	+				-1.4
2,401,026	+				+0.4
2,401,027	-				+0.8
2,401,027	-				+0.7
2,401,027	-				-1.0
2,401,027	-				+0.9
2,401,027	-				-0.2
2,401,027	-				-0.3
2,401,027	-				-0.7
2,401,027	-				+0.1
2,401,031	-				+0.6
2,401,137	-				+0.3