Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1062

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
1,237,344	+				+1.7
1,237,456	+		Pf6N2E2_1060	0.24	-0.9
1,237,638	+		Pf6N2E2_1060	0.50	+0.1
1,237,638	+		Pf6N2E2_1060	0.50	-0.5
1,237,639	-		Pf6N2E2_1060	0.50	+1.2
1,237,639	-		Pf6N2E2_1060	0.50	-0.6
1,237,675	+		Pf6N2E2_1060	0.55	+1.7
1,237,675	+		Pf6N2E2_1060	0.55	+0.1
1,237,676	-		Pf6N2E2_1060	0.55	+1.8
1,237,676	-		Pf6N2E2_1060	0.55	+0.7
1,237,676	-		Pf6N2E2_1060	0.55	-2.1
1,237,676	-		Pf6N2E2_1060	0.55	+0.5
1,237,676	-		Pf6N2E2_1060	0.55	-0.3
1,237,716	+		Pf6N2E2_1060	0.61	-0.2
1,237,717	-		Pf6N2E2_1060	0.61	-0.3
1,237,717	-		Pf6N2E2_1060	0.61	+0.7
1,237,717	-		Pf6N2E2_1060	0.61	+0.0
1,237,717	-		Pf6N2E2_1060	0.61	-0.0
1,237,717	-		Pf6N2E2_1060	0.61	+0.1
1,237,717	-		Pf6N2E2_1060	0.61	-0.7
1,237,717	-		Pf6N2E2_1060	0.61	+1.7
1,237,717	-		Pf6N2E2_1060	0.61	+0.9
1,237,786	+		Pf6N2E2_1060	0.71	+1.7
1,237,786	+		Pf6N2E2_1060	0.71	-1.5
1,237,786	+		Pf6N2E2_1060	0.71	-1.9
1,237,786	+		Pf6N2E2_1060	0.71	+0.5
1,237,786	+		Pf6N2E2_1060	0.71	-0.2
1,237,786	+		Pf6N2E2_1060	0.71	+0.5
1,237,786	+		Pf6N2E2_1060	0.71	+1.4
1,237,786	+		Pf6N2E2_1060	0.71	+0.1
1,237,787	-		Pf6N2E2_1060	0.71	+0.1
1,237,787	-		Pf6N2E2_1060	0.71	+0.3
1,237,787	-		Pf6N2E2_1060	0.71	+0.2
1,237,787	-		Pf6N2E2_1060	0.71	+1.0
1,237,787	-		Pf6N2E2_1060	0.71	+0.1
1,237,787	-		Pf6N2E2_1060	0.71	-0.0
1,237,787	-		Pf6N2E2_1060	0.71	-0.5
1,237,787	-		Pf6N2E2_1060	0.71	+0.7
1,237,787	-		Pf6N2E2_1060	0.71	-1.4
1,237,787	-		Pf6N2E2_1060	0.71	+1.6
1,237,787	-		Pf6N2E2_1060	0.71	-1.6
1,237,900	+		Pf6N2E2_1060	0.88	-0.1
1,237,991	+		Pf6N2E2_1061	0.23	-0.9
1,238,031	+		Pf6N2E2_1061	0.54	+2.7
1,238,131	+				+0.4
1,238,186	+				-0.8
1,238,186	+				-0.1
1,238,187	-				-1.5
1,238,259	+				+0.1
1,238,260	-				+1.7
1,238,390	-				-1.3
1,238,390	-				-0.2
1,238,405	+				-0.1
1,238,405	+				+0.1
1,238,411	+				+0.5
1,238,411	+				+0.1
1,238,411	+				+0.9
1,238,411	+				-1.1
1,238,411	+				+0.1
1,238,412	-				-0.1
1,238,824	+		Pf6N2E2_1062	0.24	+1.0
1,238,824	+		Pf6N2E2_1062	0.24	+0.7
1,238,825	-		Pf6N2E2_1062	0.24	+0.2
1,238,825	-		Pf6N2E2_1062	0.24	+1.1
1,239,029	+		Pf6N2E2_1062	0.32	-0.1
1,239,030	-		Pf6N2E2_1062	0.32	-0.2
1,239,030	-		Pf6N2E2_1062	0.32	-0.7
1,239,030	-		Pf6N2E2_1062	0.32	-0.5
1,239,032	+		Pf6N2E2_1062	0.33	-0.3
1,239,032	+		Pf6N2E2_1062	0.33	+1.7
1,239,032	+		Pf6N2E2_1062	0.33	+0.0
1,239,033	-		Pf6N2E2_1062	0.33	-1.6
1,239,132	+		Pf6N2E2_1062	0.37	-0.2
1,239,132	+		Pf6N2E2_1062	0.37	+0.2
1,239,133	-		Pf6N2E2_1062	0.37	-0.8
1,239,325	-		Pf6N2E2_1062	0.44	+0.0
1,239,325	-		Pf6N2E2_1062	0.44	+1.3
1,239,478	-		Pf6N2E2_1062	0.51	+0.3
1,239,524	+		Pf6N2E2_1062	0.52	+1.1
1,239,525	-		Pf6N2E2_1062	0.52	+0.4
1,239,525	-		Pf6N2E2_1062	0.52	+0.1
1,239,740	+		Pf6N2E2_1062	0.61	+1.7
1,239,741	-		Pf6N2E2_1062	0.61	+1.3
1,239,741	-		Pf6N2E2_1062	0.61	-0.8
1,239,741	-		Pf6N2E2_1062	0.61	+0.3
1,239,897	+		Pf6N2E2_1062	0.67	-2.2
1,239,897	+		Pf6N2E2_1062	0.67	-0.1
1,239,983	+		Pf6N2E2_1062	0.71	-0.4
1,239,984	-		Pf6N2E2_1062	0.71	+0.1
1,239,984	-		Pf6N2E2_1062	0.71	+1.0
1,240,076	+		Pf6N2E2_1062	0.75	+1.2
1,240,076	+		Pf6N2E2_1062	0.75	+0.1
1,240,076	+		Pf6N2E2_1062	0.75	+1.1
1,240,077	-		Pf6N2E2_1062	0.75	+0.4
1,240,077	-		Pf6N2E2_1062	0.75	-1.5
1,240,077	-		Pf6N2E2_1062	0.75	-0.4
1,240,114	+		Pf6N2E2_1062	0.76	-1.3
1,240,115	-				+0.7
1,240,115	-		Pf6N2E2_1062	0.76	+0.0
1,240,376	+		Pf6N2E2_1062	0.87	-0.2
1,240,376	+		Pf6N2E2_1062	0.87	+0.8
1,240,376	+		Pf6N2E2_1062	0.87	+0.4
1,240,376	+		Pf6N2E2_1062	0.87	-1.2
1,240,451	+		Pf6N2E2_1062	0.90	-2.0
1,240,451	+		Pf6N2E2_1062	0.90	+0.5
1,240,451	+		Pf6N2E2_1062	0.90	-0.5
1,240,451	+		Pf6N2E2_1062	0.90	-0.1
1,240,452	-		Pf6N2E2_1062	0.90	+0.0
1,240,483	-				-1.1
1,240,547	+				-0.9
1,240,547	+				+0.1
1,240,547	+				+1.4
1,240,547	+				+1.2
1,240,547	+				+0.2
1,240,580	+				-0.3
1,240,587	-				-0.9
1,240,587	-				+0.8
1,240,730	-				+0.7
1,240,738	+				+3.7
1,240,738	+				-1.9
1,240,738	+				+0.5
1,240,738	+				-0.1
1,240,738	+				-0.8
1,240,738	+				-0.2
1,240,738	+				-0.4
1,240,739	-				-1.5
1,240,739	-				+0.9
1,240,739	-				-1.6
1,240,739	-				-0.9
1,240,744	+				-0.1
1,240,744	+				+0.0
1,240,745	-		Pf6N2E2_1063	0.10	-1.8
1,240,947	+				+2.0
1,241,051	+				+1.1
1,241,051	+				-1.0
1,241,263	+		Pf6N2E2_1064	0.18	-0.3
1,241,263	+		Pf6N2E2_1064	0.18	+0.6
1,241,263	+		Pf6N2E2_1064	0.18	-0.6
1,241,263	+		Pf6N2E2_1064	0.18	-0.4
1,241,264	-		Pf6N2E2_1064	0.18	-0.6
1,241,264	-		Pf6N2E2_1064	0.18	+0.1
1,241,264	-		Pf6N2E2_1064	0.18	-0.5
1,241,277	-		Pf6N2E2_1064	0.19	-0.8
1,241,277	-		Pf6N2E2_1064	0.19	+0.0
1,241,284	+		Pf6N2E2_1064	0.20	+0.2
1,241,285	-		Pf6N2E2_1064	0.20	+0.4
1,241,285	-		Pf6N2E2_1064	0.20	-0.7
1,241,285	-		Pf6N2E2_1064	0.20	+1.2
1,241,348	-		Pf6N2E2_1064	0.24	+1.7
1,241,368	+		Pf6N2E2_1064	0.26	-1.8
1,241,391	+		Pf6N2E2_1064	0.27	-1.0
1,241,468	-		Pf6N2E2_1064	0.33	-1.8
1,241,468	-		Pf6N2E2_1064	0.33	-0.3
1,241,468	-		Pf6N2E2_1064	0.33	-1.5
1,241,482	+		Pf6N2E2_1064	0.34	+2.7
1,241,482	+		Pf6N2E2_1064	0.34	+0.1
1,241,482	+		Pf6N2E2_1064	0.34	+1.3
1,241,482	+		Pf6N2E2_1064	0.34	+0.2
1,241,482	+		Pf6N2E2_1064	0.34	+1.0
1,241,482	+		Pf6N2E2_1064	0.34	-0.1
1,241,482	+		Pf6N2E2_1064	0.34	+0.3
1,241,482	+		Pf6N2E2_1064	0.34	+0.3
1,241,483	-		Pf6N2E2_1064	0.34	-0.1
1,241,483	-		Pf6N2E2_1064	0.34	-0.1
1,241,483	-		Pf6N2E2_1064	0.34	-0.7
1,241,483	-		Pf6N2E2_1064	0.34	+1.3
1,241,483	-		Pf6N2E2_1064	0.34	+1.7
1,241,484	+		Pf6N2E2_1064	0.34	-0.5
1,241,492	+		Pf6N2E2_1064	0.35	-0.5
1,241,500	+		Pf6N2E2_1064	0.36	+1.2
1,241,500	+				+0.7
1,241,501	-		Pf6N2E2_1064	0.36	-0.5
1,241,548	+		Pf6N2E2_1064	0.39	-0.4
1,241,548	+		Pf6N2E2_1064	0.39	+0.4
1,241,549	-		Pf6N2E2_1064	0.39	-2.2
1,241,549	-		Pf6N2E2_1064	0.39	+0.2
1,241,550	+		Pf6N2E2_1064	0.39	-0.9
1,241,551	-		Pf6N2E2_1064	0.39	+0.2
1,241,680	+		Pf6N2E2_1064	0.49	-1.1