Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1000

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
1,168,270	+		Pf6N2E2_999	0.25	-2.0
1,168,270	+		Pf6N2E2_999	0.25	-1.9
1,168,270	+		Pf6N2E2_999	0.25	-0.2
1,168,270	+		Pf6N2E2_999	0.25	+1.6
1,168,270	+		Pf6N2E2_999	0.25	-0.1
1,168,271	-		Pf6N2E2_999	0.25	-0.2
1,168,271	-		Pf6N2E2_999	0.25	+0.4
1,168,271	-		Pf6N2E2_999	0.25	-1.2
1,168,271	-		Pf6N2E2_999	0.25	-0.9
1,168,271	-		Pf6N2E2_999	0.25	-0.1
1,168,275	+		Pf6N2E2_999	0.25	+0.6
1,168,296	-		Pf6N2E2_999	0.27	-1.1
1,168,371	+		Pf6N2E2_999	0.34	+0.4
1,168,371	+		Pf6N2E2_999	0.34	+1.3
1,168,371	+		Pf6N2E2_999	0.34	+0.2
1,168,371	+		Pf6N2E2_999	0.34	-0.1
1,168,372	-		Pf6N2E2_999	0.34	-1.1
1,168,408	+		Pf6N2E2_999	0.38	+0.6
1,168,408	+		Pf6N2E2_999	0.38	-1.8
1,168,408	+		Pf6N2E2_999	0.38	+0.3
1,168,531	+		Pf6N2E2_999	0.49	+0.1
1,168,531	+		Pf6N2E2_999	0.49	-0.1
1,168,618	+		Pf6N2E2_999	0.58	-1.1
1,168,619	-		Pf6N2E2_999	0.58	-1.4
1,168,619	-		Pf6N2E2_999	0.58	+1.0
1,168,619	-		Pf6N2E2_999	0.58	-0.2
1,168,619	-		Pf6N2E2_999	0.58	-0.6
1,168,714	+		Pf6N2E2_999	0.67	-1.6
1,168,714	+		Pf6N2E2_999	0.67	+1.2
1,168,714	+		Pf6N2E2_999	0.67	-0.2
1,168,714	+		Pf6N2E2_999	0.67	-0.3
1,168,715	-		Pf6N2E2_999	0.67	+0.7
1,168,715	-		Pf6N2E2_999	0.67	-0.9
1,168,715	-		Pf6N2E2_999	0.67	+1.1
1,168,715	-		Pf6N2E2_999	0.67	+0.9
1,169,053	+				+1.4
1,169,054	-				+0.9
1,169,058	-				+0.9
1,169,058	-				+0.5
1,169,122	-				+0.5
1,169,122	-				+0.4
1,169,148	+				+0.4
1,169,148	+				-1.2
1,169,149	-				+0.2
1,169,340	+		Pf6N2E2_1000	0.50	+1.2
1,169,340	+		Pf6N2E2_1000	0.50	+0.6
1,169,341	-		Pf6N2E2_1000	0.51	-0.3
1,169,341	-		Pf6N2E2_1000	0.51	+0.3
1,169,341	-		Pf6N2E2_1000	0.51	+1.3
1,169,341	-		Pf6N2E2_1000	0.51	-0.1
1,169,346	+		Pf6N2E2_1000	0.52	+3.3
1,169,346	+		Pf6N2E2_1000	0.52	-0.1
1,169,346	+		Pf6N2E2_1000	0.52	+0.6
1,169,347	-		Pf6N2E2_1000	0.52	+0.4
1,169,347	-		Pf6N2E2_1000	0.52	+0.7
1,169,347	-		Pf6N2E2_1000	0.52	-0.3
1,169,347	-		Pf6N2E2_1000	0.52	+0.8
1,169,373	+		Pf6N2E2_1000	0.59	+1.0
1,169,373	+		Pf6N2E2_1000	0.59	-0.5
1,169,374	-		Pf6N2E2_1000	0.59	-0.1
1,169,374	-		Pf6N2E2_1000	0.59	+0.0
1,169,374	-		Pf6N2E2_1000	0.59	+0.4
1,169,434	-		Pf6N2E2_1000	0.75	+1.3
1,169,451	+		Pf6N2E2_1000	0.79	+0.7
1,169,451	+		Pf6N2E2_1000	0.79	+0.6
1,169,476	-		Pf6N2E2_1000	0.86	+1.3
1,169,534	-				-1.1
1,169,562	+				+1.2
1,169,563	-				-0.5
1,169,563	-				+1.7
1,169,563	-				-2.1
1,169,563	-				+1.3
1,169,563	-				-0.6
1,169,563	-				+0.2
1,169,563	-				-3.4
1,169,563	-				+1.2
1,169,563	-				+0.0
1,169,563	-				-0.4
1,169,563	-				-1.1
1,169,563	-				-0.2
1,169,563	-				-0.8
1,169,611	-				-0.4
1,169,611	-				+1.0
1,169,645	-				+1.6
1,169,683	-				-0.8
1,169,738	+				-0.1
1,169,808	+				-0.4
1,169,808	+				-1.1
1,169,808	+				-1.4
1,169,808	+				-1.1
1,169,808	+				+0.6
1,169,808	+				-0.8
1,169,808	+				+0.3
1,169,808	+				+1.0
1,169,809	-				+0.7
1,169,809	-				-0.1
1,169,809	-				-0.6
1,169,809	-				-0.2
1,169,857	-				+0.3
1,169,882	-				-1.4
1,169,938	+				-0.6
1,169,938	+				+3.3
1,169,938	+				-0.6
1,169,938	+				+0.9
1,169,938	+				-0.6
1,169,938	+				+1.4
1,169,938	+				+2.3
1,169,939	-				+0.2
1,169,939	-				+2.3
1,169,939	-				-0.6
1,169,939	-				-0.3
1,169,939	-				-0.1
1,169,939	-				+1.3
1,169,939	-				+0.2
1,169,939	-				-0.7
1,169,939	-				+1.2
1,169,939	-				-0.8
1,169,939	-				-2.0
1,169,939	-				-2.1
1,169,942	+				+0.6
1,169,942	+				-3.3
1,169,942	+				+1.2
1,169,943	-				+1.0
1,169,943	-				-0.3
1,169,943	-				-0.3
1,169,943	-				+0.7
1,169,943	-				+1.5
1,169,943	-				+2.3
1,169,943	-				+2.3
1,169,943	-				-0.6
1,169,943	-				-1.6
1,169,943	-				-0.1
1,169,943	-				+1.6
1,169,943	-				+2.7
1,169,943	-				-1.8
1,169,943	-				+0.0
1,169,943	-				+1.0
1,169,946	+				+1.6
1,169,947	-				-0.4
1,169,947	-				+0.7
1,169,947	-				+0.6
1,169,947	-				+0.6
1,169,947	-				-0.8
1,169,947	-				-1.0
1,169,947	-				-0.1
1,170,015	-				+1.3
1,170,045	-				+0.1
1,170,070	+				+1.7
1,170,077	+				+1.7
1,170,098	+				-1.3
1,170,098	+				+0.0
1,170,098	+				+0.3
1,170,099	-				+0.7
1,170,099	-				+0.1
1,170,205	-				+0.3
1,170,224	+				-0.6
1,170,225	-				+0.3
1,170,227	+				+1.1
1,170,228	-				+0.6
1,170,228	-				-1.8
1,170,228	-				-0.7
1,170,245	+				-1.7
1,170,245	+				-0.3
1,170,246	-				+0.4
1,170,291	+				+0.0
1,170,292	-				+3.6
1,170,330	-				+0.2
1,170,330	-				-0.3
1,170,353	+				-0.1
1,170,402	+		Pf6N2E2_1001	0.12	-0.3
1,170,403	-		Pf6N2E2_1001	0.13	+0.5
1,170,425	+		Pf6N2E2_1001	0.15	-1.0