Experiment: LB_Aerobic_18HR_ZN18B
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_15110 and CSW01_15115 are separated by 52 nucleotides CSW01_15115 and CSW01_15120 overlap by 11 nucleotides CSW01_15120 and CSW01_15125 are separated by 2 nucleotides
CSW01_15110: CSW01_15110 - iron(III) ABC transporter substrate-binding protein, at 248,761 to 249,762
_15110
CSW01_15115: CSW01_15115 - iron(III) ABC transporter permease, at 249,815 to 250,753
_15115
CSW01_15120: CSW01_15120 - iron(III) ABC transporter permease, at 250,743 to 251,693
_15120
CSW01_15125: CSW01_15125 - iron(III) ABC transporter ATP-binding protein, at 251,696 to 252,460
_15125
Position (kb) 249
250
251 Strain fitness (log2 ratio) -2
-1
0
1
2 at 248.929 kb on - strand, within CSW01_15110 at 248.929 kb on - strand, within CSW01_15110 at 248.938 kb on + strand, within CSW01_15110 at 248.970 kb on - strand, within CSW01_15110 at 249.254 kb on + strand, within CSW01_15110 at 249.518 kb on + strand, within CSW01_15110 at 249.531 kb on - strand, within CSW01_15110 at 249.627 kb on + strand, within CSW01_15110 at 249.980 kb on + strand, within CSW01_15115 at 249.980 kb on + strand, within CSW01_15115 at 249.988 kb on - strand, within CSW01_15115 at 250.072 kb on + strand, within CSW01_15115 at 250.082 kb on - strand, within CSW01_15115 at 250.106 kb on + strand, within CSW01_15115 at 250.251 kb on + strand, within CSW01_15115 at 250.251 kb on + strand, within CSW01_15115 at 250.329 kb on - strand, within CSW01_15115 at 250.342 kb on + strand, within CSW01_15115 at 250.342 kb on + strand, within CSW01_15115 at 250.342 kb on + strand, within CSW01_15115 at 250.342 kb on + strand, within CSW01_15115 at 250.486 kb on - strand, within CSW01_15115 at 250.509 kb on - strand, within CSW01_15115 at 250.743 kb on + strand at 250.743 kb on + strand at 250.751 kb on - strand at 250.912 kb on - strand, within CSW01_15120 at 250.987 kb on + strand, within CSW01_15120 at 251.126 kb on + strand, within CSW01_15120 at 251.348 kb on + strand, within CSW01_15120 at 251.456 kb on + strand, within CSW01_15120 at 251.464 kb on - strand, within CSW01_15120 at 251.579 kb on - strand, within CSW01_15120 at 251.628 kb on - strand at 251.659 kb on - strand at 251.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_Aerobic_18HR_ZN18B remove 248,929 - CSW01_15110 0.17 -0.0 248,929 - CSW01_15110 0.17 -1.0 248,938 + CSW01_15110 0.18 +1.9 248,970 - CSW01_15110 0.21 -0.5 249,254 + CSW01_15110 0.49 -0.9 249,518 + CSW01_15110 0.76 -1.2 249,531 - CSW01_15110 0.77 +0.1 249,627 + CSW01_15110 0.86 +0.3 249,980 + CSW01_15115 0.18 -0.3 249,980 + CSW01_15115 0.18 -0.4 249,988 - CSW01_15115 0.18 +0.3 250,072 + CSW01_15115 0.27 -0.0 250,082 - CSW01_15115 0.28 -0.5 250,106 + CSW01_15115 0.31 -0.4 250,251 + CSW01_15115 0.46 -0.6 250,251 + CSW01_15115 0.46 -0.2 250,329 - CSW01_15115 0.55 +0.9 250,342 + CSW01_15115 0.56 +0.7 250,342 + CSW01_15115 0.56 -1.2 250,342 + CSW01_15115 0.56 -0.9 250,342 + CSW01_15115 0.56 -0.4 250,486 - CSW01_15115 0.71 -1.0 250,509 - CSW01_15115 0.74 -1.0 250,743 + -0.1 250,743 + +0.2 250,751 - +0.5 250,912 - CSW01_15120 0.18 -1.0 250,987 + CSW01_15120 0.26 +1.0 251,126 + CSW01_15120 0.40 +0.3 251,348 + CSW01_15120 0.64 -0.9 251,456 + CSW01_15120 0.75 -2.0 251,464 - CSW01_15120 0.76 -0.6 251,579 - CSW01_15120 0.88 +0.1 251,628 - -0.8 251,659 - -0.8 251,742 + +0.2
Or see this region's nucleotide sequence