Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05825

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
1,290,858	+		AO356_05810	0.78	+0.2
1,290,858	+		AO356_05810	0.78	+0.9
1,290,858	+		AO356_05810	0.78	-0.0
1,290,858	+		AO356_05810	0.78	+0.2
1,290,859	-		AO356_05810	0.78	+0.2
1,290,859	-		AO356_05810	0.78	+0.2
1,290,892	-		AO356_05810	0.81	+0.4
1,290,892	-		AO356_05810	0.81	+1.8
1,291,311	-				-0.1
1,291,311	-				-0.5
1,291,331	+				-0.2
1,291,346	-				+0.3
1,291,417	-				-0.9
1,291,511	-		AO356_05820	0.19	+0.2
1,291,511	-		AO356_05820	0.19	+1.2
1,291,514	+		AO356_05820	0.20	+0.5
1,291,515	-		AO356_05820	0.20	+0.4
1,291,515	-		AO356_05820	0.20	+1.4
1,291,545	+		AO356_05820	0.27	+1.1
1,291,546	-		AO356_05820	0.28	-0.3
1,291,546	-		AO356_05820	0.28	-0.3
1,291,605	-		AO356_05820	0.42	-0.2
1,291,618	+		AO356_05820	0.45	+0.3
1,291,633	+		AO356_05820	0.48	-1.0
1,291,634	-		AO356_05820	0.49	-0.7
1,291,671	-		AO356_05820	0.57	+1.1
1,291,779	-		AO356_05820	0.83	+0.8
1,291,779	-		AO356_05820	0.83	-0.2
1,291,779	-		AO356_05820	0.83	+0.8
1,291,802	+		AO356_05820	0.89	-0.2
1,291,803	-		AO356_05820	0.89	+1.3
1,291,803	-		AO356_05820	0.89	+0.7
1,291,845	+				+0.7
1,291,845	+				-0.2
1,291,849	+				-0.2
1,291,849	+				-0.9
1,291,849	+				+0.2
1,291,849	+				-1.2
1,291,849	+				-0.6
1,291,849	+				-0.1
1,291,850	-				-1.0
1,291,850	-				-0.1
1,291,850	-				+1.8
1,291,850	-				+1.4
1,291,850	-				+1.2
1,291,850	-				+0.7
1,291,850	-				-0.6
1,291,850	-				+0.4
1,291,883	-				+0.2
1,291,883	-				-0.1
1,291,883	-				-1.1
1,291,922	+				+0.4
1,291,922	+				+1.3
1,291,922	+				+0.9
1,291,923	-				-0.5
1,291,923	-				+1.2
1,291,923	-				+0.4
1,291,930	+				-0.6
1,291,930	+				+0.5
1,291,931	-				+0.1
1,291,931	-				+0.2
1,291,937	+				-0.7
1,291,937	+				-0.2
1,291,995	-				-0.9
1,291,995	-				+0.0
1,292,020	+				-0.7
1,292,020	+				+0.7
1,292,020	+				-0.8
1,292,020	+				-0.4
1,292,020	+				+0.1
1,292,020	+				-0.2
1,292,020	+				-0.2
1,292,021	-				-1.1
1,292,021	-				+0.8
1,292,021	-				-0.0
1,292,021	-				+0.5
1,292,021	-				+0.6
1,292,021	-				+0.5
1,292,021	-				+0.0
1,292,021	-				+1.7
1,292,021	-				+0.5
1,292,021	-				+0.2
1,292,021	-				+0.2
1,292,024	+				+0.2
1,292,024	+				-0.1
1,292,024	+				-0.1
1,292,024	+				+0.3
1,292,024	+				+0.2
1,292,024	+				+0.0
1,292,024	+				+0.4
1,292,024	+				+0.1
1,292,024	+				+0.8
1,292,024	+				-1.3
1,292,024	+				+0.6
1,292,024	+				+0.1
1,292,025	-				+1.4
1,292,025	-				+0.4
1,292,025	-				+0.5
1,292,025	-				+0.9
1,292,124	+		AO356_05825	0.14	-0.3
1,292,125	-		AO356_05825	0.14	-0.5
1,292,138	+		AO356_05825	0.14	-0.1
1,292,138	+		AO356_05825	0.14	+0.0
1,292,138	+		AO356_05825	0.14	+0.4
1,292,259	+		AO356_05825	0.21	+0.3
1,292,259	+		AO356_05825	0.21	+1.0
1,292,259	+		AO356_05825	0.21	+0.5
1,292,259	+		AO356_05825	0.21	+0.2
1,292,260	-		AO356_05825	0.21	+0.7
1,292,279	+		AO356_05825	0.22	+1.2
1,292,279	+		AO356_05825	0.22	-0.3
1,292,279	+		AO356_05825	0.22	+0.4
1,292,279	+		AO356_05825	0.22	-1.7
1,292,280	-		AO356_05825	0.22	+2.3
1,292,282	+		AO356_05825	0.22	+0.4
1,292,282	+		AO356_05825	0.22	-0.1
1,292,282	+		AO356_05825	0.22	+0.3
1,292,283	-		AO356_05825	0.22	+0.7
1,292,362	-		AO356_05825	0.26	-0.2
1,292,385	-		AO356_05825	0.27	+0.2
1,292,385	-		AO356_05825	0.27	+0.4
1,292,414	+		AO356_05825	0.29	+0.4
1,292,525	+		AO356_05825	0.34	-0.3
1,292,525	+		AO356_05825	0.34	-0.6
1,292,525	+		AO356_05825	0.34	-0.3
1,292,525	+		AO356_05825	0.34	-0.4
1,292,525	+		AO356_05825	0.34	+1.0
1,292,525	+		AO356_05825	0.34	+0.4
1,292,526	-		AO356_05825	0.34	-0.2
1,292,526	-		AO356_05825	0.34	+0.4
1,292,526	-		AO356_05825	0.34	+1.0
1,292,615	+		AO356_05825	0.39	+0.8
1,292,616	-		AO356_05825	0.39	+1.0
1,292,654	+		AO356_05825	0.41	+1.1
1,292,655	-		AO356_05825	0.41	-0.5
1,292,655	-		AO356_05825	0.41	-0.0
1,292,688	+		AO356_05825	0.43	-0.1
1,292,688	+		AO356_05825	0.43	+1.7
1,292,787	-		AO356_05825	0.48	+0.7
1,292,814	+		AO356_05825	0.49	-0.6
1,292,814	+		AO356_05825	0.49	+0.1
1,292,814	+		AO356_05825	0.49	+0.1
1,292,814	+		AO356_05825	0.49	+1.4
1,292,865	-		AO356_05825	0.52	+0.1
1,292,875	+		AO356_05825	0.52	-0.6
1,292,876	-		AO356_05825	0.52	+0.6
1,292,879	+		AO356_05825	0.52	+0.3
1,292,879	+		AO356_05825	0.52	+0.5
1,292,899	+		AO356_05825	0.54	+2.0
1,292,899	+		AO356_05825	0.54	+0.6
1,292,899	+		AO356_05825	0.54	+0.4
1,292,900	-		AO356_05825	0.54	+2.0
1,292,900	-		AO356_05825	0.54	+0.2
1,292,934	+		AO356_05825	0.55	-0.8
1,292,945	+		AO356_05825	0.56	+0.8
1,292,946	-		AO356_05825	0.56	+0.3
1,292,946	-		AO356_05825	0.56	-0.2
1,293,033	+		AO356_05825	0.60	+0.6
1,293,042	-		AO356_05825	0.61	+0.7
1,293,175	+		AO356_05825	0.68	+0.0
1,293,175	+		AO356_05825	0.68	-0.1
1,293,175	+		AO356_05825	0.68	+0.9
1,293,175	+		AO356_05825	0.68	-0.3
1,293,175	+		AO356_05825	0.68	+1.1
1,293,176	-		AO356_05825	0.68	+0.2
1,293,176	-		AO356_05825	0.68	-0.2
1,293,176	-		AO356_05825	0.68	-0.6
1,293,176	-		AO356_05825	0.68	+0.4
1,293,176	-		AO356_05825	0.68	+0.6
1,293,179	+		AO356_05825	0.68	+0.4
1,293,179	+		AO356_05825	0.68	+1.0
1,293,179	+		AO356_05825	0.68	-0.3
1,293,179	+		AO356_05825	0.68	-0.7
1,293,180	-		AO356_05825	0.68	-1.4
1,293,180	-		AO356_05825	0.68	+0.0
1,293,341	-		AO356_05825	0.76	+0.7
1,293,341	-		AO356_05825	0.76	-0.8
1,293,436	+		AO356_05825	0.81	+1.1
1,293,436	+		AO356_05825	0.81	+0.8
1,293,436	+		AO356_05825	0.81	+0.9
1,293,437	-		AO356_05825	0.81	-0.6
1,293,437	-		AO356_05825	0.81	+1.0
1,293,491	-		AO356_05825	0.84	-0.7
1,293,505	+		AO356_05825	0.85	-1.3
1,293,506	-		AO356_05825	0.85	-1.2
1,293,506	-		AO356_05825	0.85	+1.0
1,293,547	+		AO356_05825	0.87	-0.4
1,293,682	+				+0.2
1,293,682	+				+0.4
1,293,683	-				-0.1
1,293,683	-				+0.4
1,293,683	-				+1.0
1,293,790	+				+0.4
1,293,790	+				-0.1
1,293,790	+				+0.7
1,293,790	+				+1.2
1,293,791	-				+1.2
1,293,791	-				+0.3
1,293,791	-				+0.8
1,293,793	+				+1.6
1,293,794	-				+0.4
1,293,805	+				-0.0
1,293,806	-				+0.4
1,293,820	+				+0.3
1,293,824	+				+1.2
1,293,824	+				+0.2
1,293,824	+				+1.0
1,293,824	+				-0.2
1,293,825	-				+0.3
1,293,825	-				+0.9
1,293,845	-				+0.6
1,293,845	-				+0.5
1,294,051	+		AO356_05830	0.39	+0.2
1,294,052	-		AO356_05830	0.39	+0.7
1,294,283	-		AO356_05830	0.75	+1.2
1,294,439	+				-0.4
1,294,440	-				+0.4
1,294,557	+		AO356_05835	0.12	-1.2
1,294,557	+		AO356_05835	0.12	-0.3