Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2882

Experiment: m.b. nitrite 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2880 and Dshi_2881 are separated by 59 nucleotidesDshi_2881 and Dshi_2882 are separated by 119 nucleotidesDshi_2882 and Dshi_2883 are separated by 189 nucleotides Dshi_2880: Dshi_2880 - hypothetical protein (RefSeq), at 3,034,232 to 3,034,780 _2880 Dshi_2881: Dshi_2881 - hypothetical protein (RefSeq), at 3,034,840 to 3,035,316 _2881 Dshi_2882: Dshi_2882 - succinyl-CoA synthetase, alpha subunit (RefSeq), at 3,035,436 to 3,036,317 _2882 Dshi_2883: Dshi_2883 - 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq), at 3,036,507 to 3,039,470 _2883 Position (kb) 3035 3036 3037Strain fitness (log2 ratio) -1 0 1at 3036.356 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 0.6 mM
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3,036,356 - -1.5

Or see this region's nucleotide sequence