Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2739

Experiment: L-Malic Acid (C) and N2; no light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic Acid (C) and N2; no light
3,168,553	+		Rru_A2738	0.40	-1.2
3,168,720	+		Rru_A2738	0.50	-0.7
3,168,720	+		Rru_A2738	0.50	+0.0
3,168,720	+		Rru_A2738	0.50	+0.0
3,168,721	-		Rru_A2738	0.50	-1.2
3,168,739	-		Rru_A2738	0.51	+0.0
3,168,757	+		Rru_A2738	0.52	-2.2
3,168,758	-		Rru_A2738	0.52	+0.0
3,168,758	-		Rru_A2738	0.52	-1.2
3,168,758	-		Rru_A2738	0.52	+0.0
3,168,758	-		Rru_A2738	0.52	+0.0
3,168,761	+		Rru_A2738	0.53	-1.0
3,168,761	+		Rru_A2738	0.53	-1.3
3,168,761	+		Rru_A2738	0.53	+0.0
3,168,761	+		Rru_A2738	0.53	+0.0
3,168,761	+		Rru_A2738	0.53	+0.0
3,168,762	-		Rru_A2738	0.53	+0.0
3,168,762	-		Rru_A2738	0.53	-1.3
3,168,762	-		Rru_A2738	0.53	-1.6
3,168,803	+		Rru_A2738	0.55	+0.0
3,168,803	+		Rru_A2738	0.55	+0.0
3,168,804	-		Rru_A2738	0.55	-1.3
3,168,823	+		Rru_A2738	0.56	-1.0
3,168,860	-		Rru_A2738	0.59	+0.0
3,168,860	-		Rru_A2738	0.59	+0.0
3,168,940	+		Rru_A2738	0.64	+0.0
3,168,977	+		Rru_A2738	0.66	+0.0
3,168,977	+		Rru_A2738	0.66	+0.0
3,168,978	-		Rru_A2738	0.66	+0.0
3,168,978	-		Rru_A2738	0.66	+0.0
3,168,978	-		Rru_A2738	0.66	-1.6
3,169,265	-		Rru_A2738	0.84	+0.0
3,169,265	-		Rru_A2738	0.84	+0.0
3,169,499	+				+0.0
3,169,499	+				-1.4
3,169,500	-				+0.0
3,169,611	+				+0.0
3,169,611	+				+0.0
3,169,611	+				+0.0
3,169,761	+				+0.0
3,169,761	+				+0.0
3,169,761	+				+0.0
3,169,761	+				+0.0
3,169,765	+				-1.4
3,169,765	+				+0.0
3,169,766	-				+0.0
3,169,766	-				-1.5
3,169,810	-		Rru_A2739	0.12	-1.6
3,169,883	+		Rru_A2739	0.14	-0.5
3,169,883	+		Rru_A2739	0.14	+0.0
3,169,884	-		Rru_A2739	0.15	+0.0
3,169,884	-		Rru_A2739	0.15	+0.0
3,169,884	-		Rru_A2739	0.15	-1.7
3,169,999	+		Rru_A2739	0.19	+0.0
3,170,000	-		Rru_A2739	0.19	+0.0
3,170,001	+		Rru_A2739	0.19	+0.0
3,170,001	+		Rru_A2739	0.19	-0.5
3,170,001	+		Rru_A2739	0.19	-1.1
3,170,002	-		Rru_A2739	0.19	+0.0
3,170,002	-		Rru_A2739	0.19	+0.0
3,170,002	-		Rru_A2739	0.19	+0.0
3,170,002	-		Rru_A2739	0.19	+0.0
3,170,079	+		Rru_A2739	0.22	-0.5
3,170,079	+		Rru_A2739	0.22	+0.0
3,170,080	-		Rru_A2739	0.22	+0.0
3,170,080	-		Rru_A2739	0.22	+0.0
3,170,196	+		Rru_A2739	0.27	+0.0
3,170,197	-		Rru_A2739	0.27	+0.0
3,170,240	-		Rru_A2739	0.29	+0.0
3,170,343	+		Rru_A2739	0.33	-2.0
3,170,343	+		Rru_A2739	0.33	+0.0
3,170,343	+		Rru_A2739	0.33	+0.0
3,170,344	-		Rru_A2739	0.33	+0.0
3,170,344	-		Rru_A2739	0.33	+0.0
3,170,493	+		Rru_A2739	0.39	-1.0
3,170,494	-		Rru_A2739	0.39	+0.0
3,170,494	-		Rru_A2739	0.39	+0.0
3,170,494	-		Rru_A2739	0.39	+0.0
3,170,773	+		Rru_A2739	0.51	+0.0
3,170,777	+		Rru_A2739	0.51	+0.0
3,170,777	+		Rru_A2739	0.51	+0.0
3,170,777	+		Rru_A2739	0.51	+0.0
3,170,778	-		Rru_A2739	0.51	+0.0
3,170,778	-		Rru_A2739	0.51	+0.0
3,170,778	-		Rru_A2739	0.51	+0.0
3,170,778	-		Rru_A2739	0.51	+0.0
3,170,782	+		Rru_A2739	0.51	-1.1
3,170,783	-		Rru_A2739	0.51	+0.0
3,170,783	-		Rru_A2739	0.51	+0.0
3,170,783	-		Rru_A2739	0.51	+0.0
3,170,783	-		Rru_A2739	0.51	-1.5
3,170,783	-		Rru_A2739	0.51	+0.0
3,171,011	-		Rru_A2739	0.60	+0.0
3,171,012	+		Rru_A2739	0.60	+0.0
3,171,012	+		Rru_A2739	0.60	+0.0
3,171,012	+		Rru_A2739	0.60	-1.0
3,171,012	+		Rru_A2739	0.60	-2.0
3,171,012	+		Rru_A2739	0.60	-1.9
3,171,013	-		Rru_A2739	0.60	+0.0
3,171,155	+		Rru_A2739	0.66	+0.0
3,171,155	+		Rru_A2739	0.66	+0.0
3,171,155	+		Rru_A2739	0.66	-1.8
3,171,155	+		Rru_A2739	0.66	-1.0
3,171,155	+		Rru_A2739	0.66	-1.5
3,171,156	-		Rru_A2739	0.66	-0.9
3,171,156	-		Rru_A2739	0.66	+0.0
3,171,156	-		Rru_A2739	0.66	+0.0
3,171,156	-		Rru_A2739	0.66	-1.6
3,171,156	-		Rru_A2739	0.66	+0.0
3,171,156	-		Rru_A2739	0.66	+0.0
3,171,198	-		Rru_A2739	0.68	+0.0
3,171,216	+		Rru_A2739	0.69	+0.0
3,171,216	+		Rru_A2739	0.69	+0.0
3,171,217	-		Rru_A2739	0.69	-0.9
3,171,261	+		Rru_A2739	0.70	-2.2
3,171,262	-		Rru_A2739	0.70	+0.0
3,171,262	-		Rru_A2739	0.70	+0.0
3,171,262	-		Rru_A2739	0.70	-2.0
3,171,262	-		Rru_A2739	0.70	+0.0
3,171,262	-		Rru_A2739	0.70	-0.9
3,171,265	-		Rru_A2739	0.71	+0.0
3,171,265	-		Rru_A2739	0.71	+0.0
3,171,265	-		Rru_A2739	0.71	-1.0
3,171,265	-		Rru_A2739	0.71	+0.0
3,171,265	-		Rru_A2739	0.71	-1.6
3,171,265	-		Rru_A2739	0.71	+0.0
3,171,465	+		Rru_A2739	0.79	-1.3
3,171,466	-		Rru_A2739	0.79	+0.0
3,171,466	-		Rru_A2739	0.79	+0.0
3,171,625	+		Rru_A2739	0.85	+0.0
3,171,626	-		Rru_A2739	0.85	-1.0
3,171,654	+		Rru_A2739	0.86	+0.0
3,171,654	+		Rru_A2739	0.86	+0.0
3,171,654	+		Rru_A2739	0.86	+0.0
3,171,655	-		Rru_A2739	0.86	+0.0
3,171,655	-		Rru_A2739	0.86	+0.0
3,171,697	+		Rru_A2739	0.88	-1.0
3,171,897	+				+0.0
3,171,898	-				+0.0
3,171,898	-				-1.0
3,172,053	+				+0.0
3,172,053	+				-0.7
3,172,054	-				+0.0
3,172,055	+				+0.0
3,172,055	+				+0.0
3,172,055	+				+0.0
3,172,056	-				+0.0
3,172,056	-				+0.0
3,172,056	-				-1.8
3,172,056	-				+0.0
3,172,056	-				+0.0
3,172,143	+		Rru_A2740	0.14	+0.0
3,172,143	+		Rru_A2740	0.14	-2.0
3,172,144	-		Rru_A2740	0.14	-1.0
3,172,144	-		Rru_A2740	0.14	+0.0
3,172,144	-		Rru_A2740	0.14	+0.0
3,172,144	-		Rru_A2740	0.14	+0.0
3,172,444	+		Rru_A2740	0.42	+0.0
3,172,445	-		Rru_A2740	0.42	+0.0
3,172,445	-		Rru_A2740	0.42	+0.0
3,172,445	-		Rru_A2740	0.42	-1.5
3,172,650	+		Rru_A2740	0.61	+0.0
3,172,651	-		Rru_A2740	0.61	+0.0
3,172,652	+		Rru_A2740	0.61	+0.0
3,172,652	+		Rru_A2740	0.61	+0.0
3,172,652	+		Rru_A2740	0.61	+0.0
3,172,744	-		Rru_A2740	0.69	-1.0
3,172,778	+		Rru_A2740	0.72	+0.0
3,172,778	+		Rru_A2740	0.72	+0.0
3,172,778	+		Rru_A2740	0.72	+0.0
3,172,779	-		Rru_A2740	0.72	-1.8
3,172,985	+				+0.0
3,172,986	-				+0.0
3,172,986	-				+0.0