Experiment: Magnesium chloride 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_546 and Pf6N2E2_547 are separated by 221 nucleotides Pf6N2E2_547 and Pf6N2E2_548 are separated by 13 nucleotides Pf6N2E2_548 and Pf6N2E2_549 are separated by 620 nucleotides
Pf6N2E2_546 - FIG00966904: hypothetical protein, at 615,541 to 615,936
_546
Pf6N2E2_547 - Phophatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68), at 616,158 to 616,700
_547
Pf6N2E2_548 - VgrG protein, at 616,714 to 618,723
_548
Pf6N2E2_549 - ClpB protein, at 619,344 to 621,887
_549
Position (kb)
616
617
618
619 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 615.859 kb on - strand, within Pf6N2E2_546 at 615.876 kb on + strand, within Pf6N2E2_546 at 615.877 kb on - strand, within Pf6N2E2_546 at 615.938 kb on + strand at 615.963 kb on + strand at 615.963 kb on + strand at 615.963 kb on + strand at 615.963 kb on + strand at 615.964 kb on - strand at 615.964 kb on - strand at 615.964 kb on - strand at 615.964 kb on - strand at 615.967 kb on + strand at 615.967 kb on + strand at 615.967 kb on + strand at 615.967 kb on + strand at 615.967 kb on + strand at 615.967 kb on + strand at 615.967 kb on + strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.968 kb on - strand at 615.972 kb on + strand at 615.973 kb on - strand at 615.973 kb on - strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.976 kb on + strand at 615.977 kb on - strand at 615.977 kb on - strand at 615.977 kb on - strand at 615.977 kb on - strand at 615.977 kb on - strand at 615.984 kb on + strand at 615.984 kb on + strand at 615.984 kb on + strand at 615.984 kb on + strand at 615.985 kb on - strand at 615.985 kb on - strand at 615.985 kb on - strand at 616.092 kb on + strand at 616.160 kb on - strand at 616.160 kb on - strand at 616.160 kb on - strand at 616.160 kb on - strand at 616.396 kb on + strand, within Pf6N2E2_547 at 616.397 kb on - strand, within Pf6N2E2_547 at 616.397 kb on - strand, within Pf6N2E2_547 at 616.433 kb on - strand, within Pf6N2E2_547 at 616.469 kb on - strand, within Pf6N2E2_547 at 616.469 kb on - strand, within Pf6N2E2_547 at 616.576 kb on + strand, within Pf6N2E2_547 at 617.012 kb on + strand, within Pf6N2E2_548 at 617.036 kb on + strand, within Pf6N2E2_548 at 617.418 kb on - strand, within Pf6N2E2_548 at 617.612 kb on + strand, within Pf6N2E2_548 at 617.613 kb on - strand, within Pf6N2E2_548 at 617.669 kb on + strand, within Pf6N2E2_548 at 617.669 kb on + strand, within Pf6N2E2_548 at 617.670 kb on - strand, within Pf6N2E2_548 at 617.670 kb on - strand, within Pf6N2E2_548 at 617.670 kb on - strand, within Pf6N2E2_548 at 617.705 kb on + strand, within Pf6N2E2_548 at 617.963 kb on + strand, within Pf6N2E2_548 at 617.963 kb on + strand, within Pf6N2E2_548 at 617.963 kb on + strand, within Pf6N2E2_548 at 617.964 kb on - strand, within Pf6N2E2_548 at 618.032 kb on + strand, within Pf6N2E2_548 at 618.128 kb on + strand, within Pf6N2E2_548 at 618.128 kb on + strand, within Pf6N2E2_548 at 618.279 kb on - strand, within Pf6N2E2_548 at 618.279 kb on - strand, within Pf6N2E2_548 at 618.290 kb on + strand, within Pf6N2E2_548 at 618.306 kb on - strand, within Pf6N2E2_548 at 618.306 kb on - strand, within Pf6N2E2_548 at 618.452 kb on + strand, within Pf6N2E2_548 at 618.659 kb on + strand at 618.659 kb on + strand at 618.660 kb on - strand at 618.743 kb on - strand at 618.764 kb on + strand at 618.764 kb on + strand at 618.784 kb on + strand at 618.787 kb on + strand at 618.787 kb on + strand at 618.787 kb on + strand at 618.788 kb on - strand at 618.818 kb on - strand at 618.874 kb on + strand at 618.875 kb on - strand at 618.875 kb on - strand at 618.907 kb on + strand at 618.907 kb on + strand at 618.907 kb on + strand at 618.907 kb on + strand at 618.908 kb on - strand at 618.908 kb on - strand at 618.908 kb on - strand at 618.908 kb on - strand at 618.908 kb on - strand at 618.908 kb on - strand at 618.911 kb on + strand at 618.997 kb on + strand at 618.998 kb on - strand at 618.998 kb on - strand at 618.999 kb on + strand at 618.999 kb on + strand at 618.999 kb on + strand at 618.999 kb on + strand at 618.999 kb on + strand at 619.000 kb on - strand at 619.000 kb on - strand at 619.006 kb on + strand at 619.006 kb on + strand at 619.007 kb on - strand at 619.068 kb on - strand at 619.123 kb on + strand at 619.124 kb on - strand at 619.124 kb on - strand at 619.124 kb on - strand at 619.154 kb on - strand at 619.154 kb on - strand at 619.154 kb on - strand at 619.154 kb on - strand at 619.156 kb on + strand at 619.157 kb on - strand at 619.157 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Magnesium chloride 0.125 M remove 615,859 - Pf6N2E2_546 0.80 -0.3 615,876 + Pf6N2E2_546 0.85 +0.4 615,877 - Pf6N2E2_546 0.85 +0.7 615,938 + +0.1 615,963 + +0.7 615,963 + +0.1 615,963 + -0.4 615,963 + -0.3 615,964 - +1.3 615,964 - -1.1 615,964 - -0.9 615,964 - +0.6 615,967 + +0.8 615,967 + -0.9 615,967 + +0.8 615,967 + +0.3 615,967 + -0.2 615,967 + -0.2 615,967 + +0.3 615,968 - -1.2 615,968 - -0.2 615,968 - -0.9 615,968 - -0.3 615,968 - -0.3 615,968 - -0.5 615,968 - -0.3 615,968 - +0.2 615,968 - +0.7 615,968 - +2.0 615,968 - -0.1 615,968 - +0.6 615,968 - -1.0 615,972 + -0.2 615,973 - -0.8 615,973 - +0.9 615,976 + +1.2 615,976 + -0.3 615,976 + -1.2 615,976 + +0.4 615,976 + -1.3 615,976 + -0.9 615,976 + +0.4 615,976 + +0.2 615,976 + -0.1 615,976 + +0.7 615,977 - +0.2 615,977 - +0.1 615,977 - -1.2 615,977 - +0.3 615,977 - +0.7 615,984 + +0.2 615,984 + -0.6 615,984 + +0.4 615,984 + +0.2 615,985 - -0.7 615,985 - +0.1 615,985 - -0.4 616,092 + +0.4 616,160 - +0.6 616,160 - +0.7 616,160 - +0.2 616,160 - +0.9 616,396 + Pf6N2E2_547 0.44 -0.3 616,397 - Pf6N2E2_547 0.44 +0.2 616,397 - Pf6N2E2_547 0.44 +0.3 616,433 - Pf6N2E2_547 0.51 +0.5 616,469 - Pf6N2E2_547 0.57 -1.4 616,469 - Pf6N2E2_547 0.57 +0.7 616,576 + Pf6N2E2_547 0.77 -0.8 617,012 + Pf6N2E2_548 0.15 -0.3 617,036 + Pf6N2E2_548 0.16 -0.6 617,418 - Pf6N2E2_548 0.35 -0.8 617,612 + Pf6N2E2_548 0.45 -0.1 617,613 - Pf6N2E2_548 0.45 -0.1 617,669 + Pf6N2E2_548 0.48 -0.7 617,669 + Pf6N2E2_548 0.48 +1.9 617,670 - Pf6N2E2_548 0.48 -1.2 617,670 - Pf6N2E2_548 0.48 -1.2 617,670 - Pf6N2E2_548 0.48 -0.7 617,705 + Pf6N2E2_548 0.49 -1.9 617,963 + Pf6N2E2_548 0.62 -1.8 617,963 + Pf6N2E2_548 0.62 -0.6 617,963 + Pf6N2E2_548 0.62 -0.1 617,964 - Pf6N2E2_548 0.62 -0.3 618,032 + Pf6N2E2_548 0.66 +1.0 618,128 + Pf6N2E2_548 0.70 +0.3 618,128 + Pf6N2E2_548 0.70 -0.8 618,279 - Pf6N2E2_548 0.78 +0.2 618,279 - Pf6N2E2_548 0.78 -1.5 618,290 + Pf6N2E2_548 0.78 -0.5 618,306 - Pf6N2E2_548 0.79 +0.3 618,306 - Pf6N2E2_548 0.79 -1.2 618,452 + Pf6N2E2_548 0.86 +1.7 618,659 + +2.7 618,659 + +0.2 618,660 - -0.7 618,743 - -0.4 618,764 + +0.1 618,764 + -1.7 618,784 + -1.9 618,787 + +0.1 618,787 + -1.2 618,787 + +1.1 618,788 - +0.2 618,818 - +0.3 618,874 + +0.9 618,875 - +0.1 618,875 - +0.7 618,907 + -0.6 618,907 + +0.6 618,907 + +0.9 618,907 + +0.3 618,908 - -1.7 618,908 - -0.7 618,908 - +0.5 618,908 - +1.8 618,908 - +0.4 618,908 - -0.7 618,911 + -0.5 618,997 + -0.1 618,998 - -0.1 618,998 - +0.1 618,999 + +0.7 618,999 + -0.0 618,999 + -0.5 618,999 + +0.2 618,999 + +0.7 619,000 - -0.5 619,000 - +0.8 619,006 + -0.4 619,006 + -0.5 619,007 - +0.5 619,068 - +0.2 619,123 + +0.1 619,124 - +1.2 619,124 - +2.5 619,124 - +0.2 619,154 - +1.2 619,154 - +1.5 619,154 - -0.3 619,154 - -0.3 619,156 + +0.2 619,157 - +1.2 619,157 - -0.0
Or see this region's nucleotide sequence