Experiment: LB, pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1033 and Ga0059261_1034 overlap by 4 nucleotides Ga0059261_1034 and Ga0059261_1035 overlap by 4 nucleotides Ga0059261_1035 and Ga0059261_1036 are separated by 3 nucleotides Ga0059261_1036 and Ga0059261_1037 are separated by 56 nucleotides Ga0059261_1037 and Ga0059261_1038 are separated by 29 nucleotides
Ga0059261_1033: Ga0059261_1033 - pseudouridine synthase, RluA family, at 1,070,706 to 1,071,851
_1033
Ga0059261_1034: Ga0059261_1034 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 1,071,848 to 1,072,507
_1034
Ga0059261_1035: Ga0059261_1035 - hypothetical protein, at 1,072,504 to 1,072,725
_1035
Ga0059261_1036: Ga0059261_1036 - Chaperone required for the assembly of the mitochondrial F1-ATPase, at 1,072,729 to 1,073,418
_1036
Ga0059261_1037: Ga0059261_1037 - hypothetical protein, at 1,073,475 to 1,074,065
_1037
Ga0059261_1038: Ga0059261_1038 - guanylate kinase (EC 2.7.4.8), at 1,074,095 to 1,074,769
_1038
Position (kb)
1072
1073
1074 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1071.904 kb on + strand at 1071.904 kb on + strand at 1071.904 kb on + strand at 1071.905 kb on - strand at 1071.905 kb on - strand at 1071.905 kb on - strand at 1071.905 kb on - strand at 1072.061 kb on + strand, within Ga0059261_1034 at 1072.061 kb on + strand, within Ga0059261_1034 at 1072.061 kb on + strand, within Ga0059261_1034 at 1072.061 kb on + strand, within Ga0059261_1034 at 1072.061 kb on + strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.062 kb on - strand, within Ga0059261_1034 at 1072.063 kb on + strand, within Ga0059261_1034 at 1072.063 kb on + strand, within Ga0059261_1034 at 1072.063 kb on + strand, within Ga0059261_1034 at 1072.063 kb on + strand, within Ga0059261_1034 at 1072.063 kb on + strand, within Ga0059261_1034 at 1072.063 kb on + strand, within Ga0059261_1034 at 1072.064 kb on - strand, within Ga0059261_1034 at 1072.064 kb on - strand at 1072.064 kb on - strand, within Ga0059261_1034 at 1072.064 kb on - strand, within Ga0059261_1034 at 1072.064 kb on - strand, within Ga0059261_1034 at 1072.064 kb on - strand, within Ga0059261_1034 at 1072.064 kb on - strand, within Ga0059261_1034 at 1072.127 kb on - strand, within Ga0059261_1034 at 1072.503 kb on + strand at 1072.531 kb on + strand, within Ga0059261_1035 at 1072.657 kb on + strand at 1072.657 kb on + strand, within Ga0059261_1035 at 1072.657 kb on + strand, within Ga0059261_1035 at 1072.710 kb on + strand at 1072.723 kb on + strand at 1073.417 kb on - strand at 1073.417 kb on - strand at 1073.593 kb on + strand, within Ga0059261_1037 at 1073.593 kb on + strand, within Ga0059261_1037 at 1073.593 kb on + strand, within Ga0059261_1037 at 1073.593 kb on + strand, within Ga0059261_1037 at 1073.594 kb on - strand, within Ga0059261_1037 at 1073.594 kb on - strand, within Ga0059261_1037 at 1073.594 kb on - strand, within Ga0059261_1037 at 1073.602 kb on + strand, within Ga0059261_1037 at 1073.602 kb on + strand, within Ga0059261_1037 at 1073.602 kb on + strand, within Ga0059261_1037 at 1073.602 kb on + strand, within Ga0059261_1037 at 1073.602 kb on + strand, within Ga0059261_1037 at 1073.603 kb on - strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.647 kb on + strand, within Ga0059261_1037 at 1073.648 kb on - strand, within Ga0059261_1037 at 1073.648 kb on - strand, within Ga0059261_1037 at 1073.648 kb on - strand, within Ga0059261_1037 at 1073.648 kb on - strand, within Ga0059261_1037 at 1073.789 kb on + strand, within Ga0059261_1037 at 1073.790 kb on - strand, within Ga0059261_1037 at 1073.980 kb on + strand, within Ga0059261_1037 at 1073.980 kb on + strand, within Ga0059261_1037 at 1073.980 kb on + strand, within Ga0059261_1037 at 1073.981 kb on - strand, within Ga0059261_1037 at 1073.981 kb on - strand, within Ga0059261_1037 at 1074.012 kb on + strand at 1074.012 kb on + strand at 1074.012 kb on + strand at 1074.012 kb on + strand at 1074.012 kb on + strand at 1074.013 kb on - strand at 1074.013 kb on - strand at 1074.013 kb on - strand at 1074.051 kb on + strand at 1074.052 kb on - strand at 1074.052 kb on - strand at 1074.097 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH6 remove 1,071,904 + -0.2 1,071,904 + -0.4 1,071,904 + -0.2 1,071,905 - +1.1 1,071,905 - +2.2 1,071,905 - +2.2 1,071,905 - -0.2 1,072,061 + Ga0059261_1034 0.32 +0.6 1,072,061 + Ga0059261_1034 0.32 -0.1 1,072,061 + Ga0059261_1034 0.32 +1.8 1,072,061 + Ga0059261_1034 0.32 -0.7 1,072,061 + Ga0059261_1034 0.32 +0.8 1,072,062 - Ga0059261_1034 0.32 +0.3 1,072,062 - Ga0059261_1034 0.32 -0.6 1,072,062 - Ga0059261_1034 0.32 -0.4 1,072,062 - Ga0059261_1034 0.32 +0.5 1,072,062 - Ga0059261_1034 0.32 -0.2 1,072,062 - Ga0059261_1034 0.32 -0.2 1,072,062 - Ga0059261_1034 0.32 -2.4 1,072,062 - Ga0059261_1034 0.32 -1.8 1,072,062 - Ga0059261_1034 0.32 -2.0 1,072,063 + Ga0059261_1034 0.33 +1.2 1,072,063 + Ga0059261_1034 0.33 +0.8 1,072,063 + Ga0059261_1034 0.33 -0.4 1,072,063 + Ga0059261_1034 0.33 -0.2 1,072,063 + Ga0059261_1034 0.33 +0.0 1,072,063 + Ga0059261_1034 0.33 -1.6 1,072,064 - Ga0059261_1034 0.33 +0.5 1,072,064 - +0.2 1,072,064 - Ga0059261_1034 0.33 -0.9 1,072,064 - Ga0059261_1034 0.33 +0.2 1,072,064 - Ga0059261_1034 0.33 +0.4 1,072,064 - Ga0059261_1034 0.33 -0.3 1,072,064 - Ga0059261_1034 0.33 -1.0 1,072,127 - Ga0059261_1034 0.42 +0.1 1,072,503 + +0.2 1,072,531 + Ga0059261_1035 0.12 +0.8 1,072,657 + +0.2 1,072,657 + Ga0059261_1035 0.69 +1.2 1,072,657 + Ga0059261_1035 0.69 -0.1 1,072,710 + +1.2 1,072,723 + +0.5 1,073,417 - -1.6 1,073,417 - +0.3 1,073,593 + Ga0059261_1037 0.20 -0.1 1,073,593 + Ga0059261_1037 0.20 -1.1 1,073,593 + Ga0059261_1037 0.20 -0.7 1,073,593 + Ga0059261_1037 0.20 +0.2 1,073,594 - Ga0059261_1037 0.20 -0.6 1,073,594 - Ga0059261_1037 0.20 -0.8 1,073,594 - Ga0059261_1037 0.20 +0.6 1,073,602 + Ga0059261_1037 0.21 +0.1 1,073,602 + Ga0059261_1037 0.21 +0.8 1,073,602 + Ga0059261_1037 0.21 +0.1 1,073,602 + Ga0059261_1037 0.21 -0.7 1,073,602 + Ga0059261_1037 0.21 +1.1 1,073,603 - Ga0059261_1037 0.22 +0.8 1,073,647 + Ga0059261_1037 0.29 -0.1 1,073,647 + Ga0059261_1037 0.29 -0.2 1,073,647 + Ga0059261_1037 0.29 +0.8 1,073,647 + Ga0059261_1037 0.29 +1.2 1,073,647 + Ga0059261_1037 0.29 +1.0 1,073,647 + Ga0059261_1037 0.29 +0.2 1,073,647 + Ga0059261_1037 0.29 +0.4 1,073,648 - Ga0059261_1037 0.29 +0.6 1,073,648 - Ga0059261_1037 0.29 -0.6 1,073,648 - Ga0059261_1037 0.29 +0.1 1,073,648 - Ga0059261_1037 0.29 -1.8 1,073,789 + Ga0059261_1037 0.53 -0.0 1,073,790 - Ga0059261_1037 0.53 +0.2 1,073,980 + Ga0059261_1037 0.85 +0.4 1,073,980 + Ga0059261_1037 0.85 -1.5 1,073,980 + Ga0059261_1037 0.85 -0.9 1,073,981 - Ga0059261_1037 0.86 -0.5 1,073,981 - Ga0059261_1037 0.86 +0.6 1,074,012 + +0.2 1,074,012 + +1.1 1,074,012 + +0.7 1,074,012 + +1.2 1,074,012 + -1.5 1,074,013 - +0.1 1,074,013 - -0.3 1,074,013 - +0.8 1,074,051 + +0.2 1,074,052 - -0.3 1,074,052 - +0.4 1,074,097 - -0.6
Or see this region's nucleotide sequence